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14
result(s) for
"Shiina, Kenta"
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Machine-Learning Studies on Spin Models
by
Mori, Hiroyuki
,
Lee, Hwee Kuan
,
Okabe, Yutaka
in
639/766/259
,
639/766/530/2795
,
Classification
2020
With the recent developments in machine learning, Carrasquilla and Melko have proposed a paradigm that is complementary to the conventional approach for the study of spin models. As an alternative to investigating the thermal average of macroscopic physical quantities, they have used the spin configurations for the classification of the disordered and ordered phases of a phase transition through machine learning. We extend and generalize this method. We focus on the configuration of the long-range correlation function instead of the spin configuration itself, which enables us to provide the same treatment to multi-component systems and the systems with a vector order parameter. We analyze the Berezinskii-Kosterlitz-Thouless (BKT) transition with the same technique to classify three phases: the disordered, the BKT, and the ordered phases. We also present the classification of a model using the training data of a different model.
Journal Article
Inverse renormalization group based on image super-resolution using deep convolutional networks
2021
The inverse renormalization group is studied based on the image super-resolution using the deep convolutional neural networks. We consider the improved correlation configuration instead of spin configuration for the spin models, such as the two-dimensional Ising and three-state Potts models. We propose a block-cluster transformation as an alternative to the block-spin transformation in dealing with the improved estimators. In the framework of the dual Monte Carlo algorithm, the block-cluster transformation is regarded as a transformation in the graph degrees of freedom, whereas the block-spin transformation is that in the spin degrees of freedom. We demonstrate that the renormalized improved correlation configuration successfully reproduces the original configuration at all the temperatures by the super-resolution scheme. Using the rule of enlargement, we repeatedly make inverse renormalization procedure to generate larger correlation configurations. To connect thermodynamics, an approximate temperature rescaling is discussed. The enlarged systems generated using the super-resolution satisfy the finite-size scaling.
Journal Article
Analytical and clinical validity of wearable, multi-sensor technology for assessment of motor function in patients with Parkinson’s disease in Japan
by
Saiki, Shinji
,
Nakatome, Keisuke
,
Fernandez, Jovelle
in
692/308/53
,
692/617/375/365/1718
,
Clinical trials
2023
Continuous, objective monitoring of motor signs and symptoms may help improve tracking of disease progression and treatment response in Parkinson’s disease (PD). This study assessed the analytical and clinical validity of multi-sensor smartwatch measurements in hospitalized and home-based settings (96 patients with PD; mean wear time 19 h/day) using a twice-daily virtual motor examination (VME) at times representing medication OFF/ON states. Digital measurement performance was better during inpatient clinical assessments for composite V-scores than single-sensor–derived features for bradykinesia (Spearman |r|= 0.63, reliability = 0.72), tremor (|r|= 0.41, reliability = 0.65), and overall motor features (|r|= 0.70, reliability = 0.67). Composite levodopa effect sizes during hospitalization were 0.51–1.44 for clinical assessments and 0.56–1.37 for VMEs. Reliability of digital measurements during home-based VMEs was 0.62–0.80 for scores derived from weekly averages and 0.24–0.66 for daily measurements. These results show that unsupervised digital measurements of motor features with wrist-worn sensors are sensitive to medication state and are reliable in naturalistic settings.
Trial Registration:
Japan Pharmaceutical Information Center Clinical Trials Information (JAPIC-CTI): JapicCTI-194825; Registered June 25, 2019.
Journal Article
Digital detection of Alzheimer’s disease using smiles and conversations with a chatbot
2024
In super-aged societies, dementia has become a critical issue, underscoring the urgent need for tools to assess cognitive status effectively in various sectors, including financial and business settings. Facial and speech features have been tried as cost-effective biomarkers of dementia including Alzheimer’s disease (AD). We aimed to establish an easy, automatic, and extensive screening tool for AD using a chatbot and artificial intelligence. Smile images and visual and auditory data of natural conversations with a chatbot from 99 healthy controls (HCs) and 93 individuals with AD or mild cognitive impairment due to AD (PwA) were analyzed using machine learning. A subset of 8 facial and 21 sound features successfully distinguished PwA from HCs, with a high area under the receiver operating characteristic curve of 0.94 ± 0.05. Another subset of 8 facial and 20 sound features predicted the cognitive test scores, with a mean absolute error as low as 5.78 ± 0.08. These results were superior to those obtained from face or auditory data alone or from conventional image depiction tasks. Thus, by combining spontaneous sound and facial data obtained through conversations with a chatbot, the proposed model can be put to practical use in real-life scenarios.
Journal Article
Comprehensive data for studying serum exosome microRNA transcriptome in Parkinson’s disease patients
by
Saiki, Shinji
,
Kataura, Tetsushi
,
Yu, Zhiyang
in
692/53/2421
,
692/699/375/1718
,
Basal ganglia
2024
Parkinson’s disease (PD), the second most prevalent neurodegenerative disorder, was classically attributed to alpha-synuclein aggregation and consequent loss of dopaminergic neurons in the substantia nigra pars compacta. Recently, emerging evidence suggested a broader spectrum of contributing factors, including exosome-mediated intercellular communication, which can potentially serve as biomarkers and therapeutic targets. However, there is a remarkable lack of comprehensive studies that connect the serum exosome microRNA (miRNA) transcriptome with demographic, clinical, and neuroimaging data in PD patients. Here, we present serum exosome miRNA transcriptome data generated from four cohort studies. Two of these studies include 96 PD patients and 80 age- and gender-matched controls, with anonymised demographic, clinical, and neuroimaging data provided for PD patients. The other two studies involve 96 PD patients who were evaluated both before and after one year of treatment with rasagiline, a widely prescribed anti-parkinsonism drug. Together, the datasets provide a valuable source for understanding pathogenesis and discovering biomarkers and therapeutic targets in PD.
Journal Article
Possible Neuroprotective Effects of l-Carnitine on White-Matter Microstructural Damage and Cognitive Decline in Hemodialysis Patients
by
Motoi, Yumiko
,
Kamagata, Koji
,
Andica, Christina
in
Angina pectoris
,
Blood pressure
,
C-reactive protein
2021
Although l-carnitine alleviated white-matter lesions in an experimental study, the treatment effects of l-carnitine on white-matter microstructural damage and cognitive decline in hemodialysis patients are unknown. Using novel diffusion magnetic resonance imaging (dMRI) techniques, white-matter microstructural changes together with cognitive decline in hemodialysis patients and the effects of l-carnitine on such disorders were investigated. Fourteen hemodialysis patients underwent dMRI and laboratory and neuropsychological tests, which were compared across seven patients each in two groups according to duration of l-carnitine treatment: (1) no or short-term l-carnitine treatment (NSTLC), and (2) long-term l-carnitine treatment (LTLC). Ten age- and sex-matched controls were enrolled. Compared to controls, microstructural disorders of white matter were widely detected on dMRI of patients. An autopsy study of one patient in the NSTLC group showed rarefaction of myelinated fibers in white matter. With LTLC, microstructural damage on dMRI was alleviated along with lower levels of high-sensitivity C-reactive protein and substantial increases in carnitine levels. The LTLC group showed better achievement on trail making test A, which was correlated with amelioration of disorders in some white-matter tracts. Novel dMRI tractography detected abnormalities of white-matter tracts after hemodialysis. Long-term treatment with l-carnitine might alleviate white-matter microstructural damage and cognitive impairment in hemodialysis patients.
Journal Article
Comprehensive studies on the universality of BKT transitions -- Machine-learning study, Monte Carlo simulation, and Level-spectroscopy method
2023
Comprehensive studies are made on the six-state clock universality of two models using several approaches. We apply the machine-learning technique of phase classification to the antiferromagnetic (AF) three-state Potts model on the square lattice with ferromagnetic next-nearest-neighbor (NNN) coupling and the triangular AF Ising model with anisotropic NNN coupling to study two Berezinskii-Kosterlitz-Thouless transitions. We also use the Monte Carlo simulation paying attention to the ratio of correlation functions of different distances for these two models. The obtained results are compared with those of the previous studies using the level-spectroscopy method. We directly show the six-state clock universality for totally different systems with the machine-learning study.
Machine-Learning Study using Improved Correlation Configuration and Application to Quantum Monte Carlo Simulation
by
Lee, Hwee Kuan
,
Tomita, Yusuke
,
Okabe, Yutaka
in
Algorithms
,
Classification
,
Computer simulation
2020
We use the Fortuin-Kasteleyn representation based improved estimator of the correlation configuration as an alternative to the ordinary correlation configuration in the machine-learning study of the phase classification of spin models. The phases of classical spin models are classified using the improved estimators, and the method is also applied to the quantum Monte Carlo simulation using the loop algorithm. We analyze the Berezinskii-Kosterlitz-Thouless (BKT) transition of the spin 1/2 quantum XY model on the square lattice. We classify the BKT phase and the paramagnetic phase of the quantum XY model using the machine-learning approach. We show that the classification of the quantum XY model can be performed by using the training data of the classical XY model.
Machine-Learning Studies on Spin Models
by
Mori, Hiroyuki
,
Lee, Hwee Kuan
,
Okabe, Yutaka
in
Classification
,
Configurations
,
Machine learning
2020
With the recent developments in machine learning, Carrasquilla and Melko have proposed a paradigm that is complementary to the conventional approach for the study of spin models. As an alternative to investigating the thermal average of macroscopic physical quantities, they have used the spin configurations for the classification of the disordered and ordered phases of a phase transition through machine learning. We extend and generalize this method. We focus on the configuration of the long-range correlation function instead of the spin configuration itself, which enables us to provide the same treatment to multi-component systems and the systems with a vector order parameter. We analyze the Berezinskii-Kosterlitz-Thouless (BKT) transition with the same technique to classify three phases: the disordered, the BKT, and the ordered phases. We also present the classification of a model using the training data of a different model.
Inverse Renormalization Group based on Image Super-Resolution using Deep Convolutional Networks
by
Mori, Hiroyuki
,
Lee, Hwee Kuan
,
Tomita, Yusuke
in
Algorithms
,
Artificial neural networks
,
Clusters
2021
The inverse renormalization group is studied based on the image super-resolution using the deep convolutional neural networks. We consider the improved correlation configuration instead of spin configuration for the spin models, such as the two-dimensional Ising and three-state Potts models. We propose a block-cluster transformation as an alternative to the block-spin transformation in dealing with the improved estimators. In the framework of the dual Monte Carlo algorithm, the block-cluster transformation is regarded as a transformation in the graph degrees of freedom, whereas the block-spin transformation is that in the spin degrees of freedom. We demonstrate that the renormalized improved correlation configuration successfully reproduces the original configuration at all the temperatures by the super-resolution scheme. Using the rule of enlargement, we repeatedly make inverse renormalization procedure to generate larger correlation configurations. To connect thermodynamics, an approximate temperature rescaling is discussed. The enlarged systems generated using the super-resolution satisfy the finite-size scaling.