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result(s) for
"Silva, Jéssica Barboza da"
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Genome- and Transcriptome-Wide Characterization of AP2/ERF Transcription Factor Superfamily Reveals Their Relevance in Stylosanthes scabra Vogel Under Water Deficit Stress
by
Oliveira, Wilson Dias de
,
Nunes, Cínthia Carla Claudino Grangeiro
,
Ferreira-Neto, José Ribamar Costa
in
Abiotic stress
,
Adaptation
,
Agricultural production
2026
Stylosanthes scabra, a legume native to the Brazilian semiarid region, exhibits remarkable drought tolerance and represents a valuable model for studying molecular adaptation in legumes. Transcription factors of the AP2/ERF superfamily play central roles in plant development and stress response. This study aimed to identify and characterize AP2/ERF genes in Stylosanthes scabra and to analyze their transcriptional response to root dehydration. Candidate genes were identified through a Hidden Markov Model (HMM) search using the AP2 domain profile (PF00847), followed by validation of conserved domains, physicochemical characterization, prediction of subcellular localization, phylogenetic and structural analyses, and functional annotation. A total of 295 AP2/ERF proteins were identified and designated as SscAP2/ERF, most of which were predicted to be localized in the nucleus. These proteins exhibited a wide range of molecular weights and isoelectric points, reflecting structural diversity, and were classified into four subfamilies: AP2, ERF, DREB, and RAV. Functional annotation revealed predominant roles in DNA binding and transcriptional regulation, while promoter analysis identified numerous stress-related cis-elements. A total of 32 transcripts were differentially expressed under 24 h of water deficit, and four selected genes had their expression patterns validated by qPCR. These findings provide new insights into the AP2/ERF gene subfamily in Stylosanthes scabra and lay the groundwork for future biotechnological approaches to enhance stress tolerance in legumes.
Journal Article
Genome-Wide Identification and Stress Responses of Cowpea Thaumatin-like Proteins: A Comprehensive Analysis
by
Silva, Manassés Daniel da
,
Costa, Antônio Félix da
,
Ferreira-Neto, José Ribamar Costa
in
Abiotic stress
,
Amino acids
,
Analysis
2024
Cowpea (Vigna unguiculata (L.) Walp.) is an important legume cultivated mainly in regions with limited water availability across the African and American continents. Its productivity is significantly affected by environmental stresses. Thaumatin-like proteins (TLPs), which belong to the PR-5 (pathogenesis-related 5) protein family, are known to be responsive to both biotic and abiotic stresses. However, their role remains controversial, with some TLPs associated with plant defense (particularly against fungal infections) and others associated with abiotic stresses response. In this study, we evaluated the structural diversity and gene expression of TLPs in cowpea (VuTLPs) under different stress conditions, including biotic [mechanical injury followed by inoculation with Cowpea Aphid-borne Mosaic Virus (CABMV) or Cowpea Severe Mosaic Virus (CPSMV)] and abiotic (root dehydration). Genomic anchoring of VuTLPs revealed 34 loci encoding these proteins. Neighbor- joining analysis clustered the VuTLPs into three distinct groups. We identified 15 segmental duplication and 6 tandem duplication gene pairs, with the majority of VuTLP genes found to be under purifying selection. Promoter analysis associated VuTLPs with bHLH, Dof-type, and MYB- related transcription factors, supporting their diverse roles. Diversity in VuTLP function was also observed in their expression profiles under the studied stress conditions. Gene expression data showed that most VuTLPs are recruited within the first minutes after biotic stress imposition. For the root dehydration assay, the most transcripts were up-regulated 150 min post-stress. Moreover, the gene expression data suggested that VuTLPs exhibit functional specialization depending on the stress condition, highlighting their diverse roles and biotechnological potential.
Journal Article
From Genes to Stress Response: Genomic and Transcriptomic Data Suggest the Significance of the Inositol and Raffinose Family Oligosaccharide Pathways in Stylosanthes scabra, Adaptation to the Caatinga Environment
by
Silva, Manassés Daniel da
,
Vilanova, Elayne Cristina Ramos
,
de Melo, Natoniel Franklin
in
absorption
,
ancestry
,
antinutritional factors
2024
S. scabra is an important forage and extremophilic plant native to the Brazilian Caatinga semiarid region. It has only recently been subjected to omics-based investigations, and the generated datasets offer insights into biotechnologically significant candidates yet to be thoroughly examined. INSs (inositol and its derivatives) and RFO (raffinose oligosaccharide family) pathways emerge as pivotal candidates, given their critical roles in plant physiology. The mentioned compounds have also been linked to negative impacts on the absorption of nutrients in mammals, affecting overall nutritional intake and metabolism. Therefore, studying these metabolic pathways is important not just for plants but also for animals who depend on them as part of their diet. INS and RFO pathways in S. scabra stood out for their abundance of identified loci and enzymes. The enzymes exhibited genomic redundancy, being encoded by multiple loci and various gene families. The phylogenomic analysis unveiled an expansion of the PIP5K and GolS gene families relative to the immediate S. scabra ancestor. These enzymes are crucial for synthesizing key secondary messengers and the RFO precursor, respectively. Transcriptional control of the studied pathways was associated with DOF-type, C2H2, and BCP1 transcription factors. Identification of biological processes related to INS and RFO metabolic routes in S. scabra highlighted their significance in responding to stressful conditions prevalent in the Caatinga environment. Finally, RNA-Seq and qPCR data revealed the relevant influence of genes of the INS and RFO pathways in the S. scabra response to water deprivation. Our study deciphers the genetics and transcriptomics of the INS and RFO in S. scabra, shedding light on their importance for a Caatinga-native plant and paving the way for future biotechnological applications in this species and beyond.
Journal Article
Antinociceptive and analgesic effect of continuous intravenous infusion of maropitant, lidocaine and ketamine alone or in combination in cats undergoing ovariohysterectomy
by
Lavor, Mário Sérgio Lima de
,
Silva, Elisângela Barboza da
,
Corrêa, Janaina Maria Xavier
in
acepromazine
,
adverse effects
,
Analgesia
2021
Background
Multimodal analgesia consists of the combination of analgesic drugs at low doses to act in different places along the path of pain. Studies with continuous infusion of analgesic drugs in cats are not common. This study aimed to evaluate the analgesic effect of maropitant, lidocaine and ketamine alone or in combination (intravenous bolus + subsequent continuous intravenous infusion) in the management of acute postoperative pain in cats undergoing ovariohysterectomy. Seventy healthy cats undergoing an ovariohysterectomy received a standard anesthetic protocol consisting of acepromazine and morphine, propofol (anesthesia induction), and isoflurane (anesthesia maintenance). The animals were stratified into seven groups (n = 10 in each group): control (CG), maropitant (MG), lidocaine (LG), ketamine (KG), maropitant + lidocaine (LMG), maropitant + ketamine (KMG), and maropitant + lidocaine + ketamine (LKMG). All drugs were injected first as an intravenous bolus and then by continuous intravenous infusion. During surgery, esophageal temperature, respiratory rate, heart rate, oxygen saturation, expired isoflurane concentration, and partial pressure of carbon dioxide at the end of expiration were evaluated at 7 time points. Postoperative pain was evaluated for 6 h after extubation using the visual analogue scale and the UNESP-Botucatu multidimensional composite pain scale for assessing postoperative pain in cats.
Results
Adverse effects related to maropitant, lidocaine and ketamine infusion were not observed. Pain scores were lower in the MG, KG and LG groups when compared to the CG group using both scales. Although pain scores were also lower in all combination groups than CG, more animals in these groups required rescue analgesia compared to MG. This indicates that the postoperative analgesic effect of all drugs, either alone or in combination, confers analgesia, although the combinations did not promote greater analgesia.
Conclusions
Continuous intravenous infusion of maropitant, lidocaine, and ketamine alone induces postoperative analgesic effect in cats undergoing ovariohysterectomy, but combinations of these drugs did not increase the analgesic effect. No adverse effect was observed with any drug or their combination.
Journal Article
Salt Stress in Melon: Efficacy of Seed Treatments for Stress Mitigation and Selection of Tolerant Cultivars
by
Silva Alex Álvares da
,
Bendito Clarisse Pereira
,
Sousa Giovanna Dias de
in
Accumulation
,
Antioxidants
,
Ascorbic acid
2026
As one of the most economically important cucurbit crops, melon (Cucumis melo L.) is extensively cultivated in semi-arid and tropical regions where high evaporative demand frequently intensifies salt accumulation. These conditions promote the evaporative concentration of salt, leading to salt accumulation in soil and irrigation water, which can impair crop development. Therefore, identifying approaches capable of maintaining seedling establishment under saline conditions is crucial for sustainable melon production. This study evaluated tolerance and antioxidant responses in different melon cultivars using seed treatments to mitigate salt stress effects. The experiment was conducted in two stages under a completely randomized design with four replicates of 50 seeds. In the first stage, a 3 × 5 factorial design tested three salinity levels (0, 60, and 120 mM NaCl) and five cultivars (‘Dali’, ‘Premier’, ‘Supreme’, ‘Imperial 45’, and ‘Asturia’), assessing morphological, physiological, and biochemical traits. In the second stage, two contrasting cultivars (‘Imperial 45’ (sensitive) and ‘Asturia’ (tolerant)) were exposed to salinity combined with stress attenuators, including hydropriming, gibberellic acid, ascorbic acid, salicylic acid, and hydrogen peroxide. Additional biochemical markers and antioxidant enzyme activities were analyzed. Results showed that gibberellic acid and ascorbic acid enhanced antioxidant activity and reduced oxidative damage, particularly in Imperial 45, whereas hydrogen peroxide was more effective in Asturia. Based on their physiological and biochemical responses during germination and early seedling development, Asturia and Imperial 45 were identified as tolerant and sensitive to salt stress, respectively. These findings indicate that the effectiveness of seed treatments depends on cultivar-specific physiological characteristics at the seedling stage.
Journal Article
Comparison of Volumetric Distribution in Drone Spraying Considering Height, Application Volume, and Nozzle Type
by
Inácio, Franklin Daniel
,
Oliveira, Luan Pereira de
,
Costa, Octávio Pereira da
in
Agricultural technology
,
Agriculture
,
Altitude
2025
The advancement of technology in agriculture has driven the use of drones for spraying, with their increasing adoption presenting challenges in calibration and volumetric distribution efficiency. This study aimed to evaluate the volumetric distribution of drone spraying by combining different operational parameters to determine spray swath and application uniformity. Experiments were conducted using a DJI T10 drone and a volumetric distribution table to assess the impact of different flight heights (2, 3, and 4 m), application volumes (8, 12, 16, and 20 L ha−1), and nozzle types (FV 110 015, FL 110 010, and CO 080 010). Environmental conditions were monitored, and data were analyzed using histograms, analysis of variance (ANOVA) by F-test (p ≤ 0.05), and the Scott–Knott test (p ≤ 0.05) to group means. Results indicated that a lower application volume (8 L ha−1) led to greater application uniformity and a narrower spray swath. Higher flight altitude (4 m) resulted in a wider spray swath and a normal distribution of spray deposition. Fine droplet nozzles (CO 080 010) enhanced uniformity, while very coarse droplets (FV 110 015) concentrated more volume in the center of the swath. Thus, using fine droplet nozzles (CO 080 010), lower application volume (8 and 12 L ha−1), and higher flight altitude (4 m) as operational parameters maximizes drone spraying efficiency; however, this also increases drift potential.
Journal Article
Efficacy of Preemptive Analgesia with Amantadine for Controlling Postoperative Pain in Cats Undergoing Ovariohysterectomy
by
Corrêa, Janaína Maria Xavier
,
Guedes, Paula Elisa Brandão
,
da Silva, Elisângela Barboza
in
acute pain
,
Amantadine
,
analgesia
2024
This study aimed to evaluate the effect of the preemptive administration of amantadine on postoperative analgesia in cats undergoing ovariohysterectomy and its influence on the physiological parameters. Twenty healthy domestic cats scheduled to undergo ovariohysterectomy at the Santa Cruz State University, Ilhéus, were divided into two groups: the control group (Group C; n = 10) and the amantadine group (Group A; n = 10). The cats in Group C received placebo capsules 30 min prior to the standard anesthetic protocol, whereas those in Group A received 5 mg/kg of amantadine orally 30 min prior to the standard anesthetic protocol. Postoperative pain was assessed using the visual analog scale and the UNESP-Botucatu multidimensional scale for the evaluation of postoperative pain in cats. The administration of amantadine had no effect on the physiological parameters evaluated. The pain scores in Group A were lower than those in Group C, indicating that the frequency of rescue analgesic administration cats in Group A was lower. That way, preemptive oral administration of amantadine at a dose of 5 mg/kg was effective at controlling postoperative pain in cats undergoing ovariohysterectomy. Moreover, no adverse effects or alterations in the physiological patterns were observed in the treated animals.
Journal Article
Structural Design, Synthesis and Antioxidant, Antileishmania, Anti-Inflammatory and Anticancer Activities of a Novel Quercetin Acetylated Derivative
by
da Silva, Saul Vislei Simões
,
Costa, Silvia Lima
,
de Freitas Santos Júnior, Aníbal
in
anti-inflammatory
,
antileishmania
,
antioxidant
2021
Quercetin (Q) is a bioflavonoid with biological potential; however, poor solubility in water, extensive enzymatic metabolism and a reduced bioavailability limit its biopharmacological use. The aim of this study was to perform structural modification in Q by acetylation, thus, obtaining the quercetin pentaacetate (Q5) analogue, in order to investigate the biological potentials (antioxidant, antileishmania, anti-inflammatory and cytotoxicity activities) in cell cultures. Q5 was characterized by FTIR, 1H and 13C NMR spectra. The antioxidant potential was evaluated against the radical ABTS•+. The anti-inflammatory potential was evaluated by measuring the pro-inflammatory cytokine tumor necrosis factor (TNF) and the production of nitric oxide (NO) in peritoneal macrophages from BALB/c mice. Cytotoxicity tests were performed using the AlamarBlue method in cancer cells HepG2 (human hepatocarcinoma), HL-60 (promyelocytic leukemia) and MCR-5 (healthy human lung fibroblasts) as well as the MTT method for C6 cell cultures (rat glioma). Q and Q5 showed antioxidant activity of 29% and 18%, respectively, which is justified by the replacement of hydroxyls by acetyl groups. Q and Q5 showed concentration-dependent reductions in NO and TNF production (p < 0.05); Q and Q5 showed higher activity at concentrations > 40µM when compared to dexamethasone (20 µM). For the HL-60 lineage, Q5 demonstrated selectivity, inducing death in cancer cells, when compared to the healthy cell line MRC-5 (IC50 > 80 µM). Finally, the cytotoxic superiority of Q5 was verified (IC50 = 11 µM), which, at 50 µM for 24 h, induced changes in the morphology of C6 glioma cells characterized by a round body shape (not yet reported in the literature). The analogue Q5 had potential biological effects and may be promising for further investigations against other cell cultures, particularly neural ones.
Journal Article
A soil quality physical–chemical approach 30 years after land-use change from forest to banana plantation
by
da Silva, Reginaldo Barboza
,
Packer, Ana Paula
,
Rosa, Jéssica Silva
in
Agricultural production
,
Agriculture
,
Bananas
2022
Bananas are a worldwide cultivated crop and one of the main agricultural activities in Brazil. The banana orchards cultivated in the region of São Paulo State are under native areas of the Atlantic Forest biome. The Atlantic Forest has suffered agricultural and urban pressure for many years. Banana crops require soil management and superficial vegetation removal in the first cycles. We conducted a study aiming to understand the impact of long-standing banana cultivation in the Atlantic forest region. Soil samples in banana plantations (EBP) and forest remnants (FR) were collected from trenches with 0- to 100-cm layers. The soil bulk density in EBP until 30-cm depth was 12.76% higher than that in FR. Quantifications of macropores and micropores in FR reached values higher than those in EBP. The results showed that carbon stocks decreased from the top to the deeper layers. Thirty years after the conversion, the FR treatment accumulated 28.23% more carbon than EBP. Considering our results, it was evident that changes in physical and chemical properties reflected the negative impacts of the banana plantations, cropped through conventional management, when converted from forest even in regard to a remnant one. These findings, showed for the first time, lead us to understand the soil management of banana plantations, following conventional agriculture systems, as a potential carbon stock reducer and a factor resulting in the loss of soil quality in the region. Additionally, our data can be used by environmentalists and government policymakers to promote environmental sustainability.
Journal Article
Spatio-Temporal Modeling of Land and Pasture Vulnerability in Dairy Basins in Northeastern Brazil
by
Pandorfi, Héliton
,
Silva, Jéssica Bruna Alves da
,
Ferreira, Maria Beatriz
in
Agricultural production
,
Agriculture
,
Basins
2024
The objective of this study is to evaluate the spatio-temporal dynamics of land vulnerability and pasture areas in the dairy basins of the states of Pernambuco and Alagoas, which are part of the Ipanema River Watershed (IRW) in the Northeast Region of Brazil. Maps of the Land Use and Land Cover (LULC); the Index of Vulnerability to Degradation (IVD); the Land Vulnerability Index (LVI); time series of Effective Herd (EH), Milked Cows (MC), and Milk Production (MP); and Pasture Cover (PC) and Quality (PCQ) were created as parameters. An opposite pattern was observed between the land use classes of Livestock, Agriculture, and Forest. The IRW area has predominantly flat terrain with a very high risk of degradation. The analysis of MC was consistent with the information from the EH analysis as well as with MP. When assessing Pasture Quality, Severe Degradation areas increased from 2010 to 2014, decreased after 2015, and rose again in 2020. Moderate Degradation areas remained high, while Not Degraded pasture areas were consistently the lowest from 2012 to 2020. Over the 10 years analyzed (2010–2020), the area showed a strong degradation process, with the loss of approximately 16% of the native vegetation of the Caatinga Biome and an increase in pasture areas and land vulnerability.
Journal Article