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result(s) for
"Singh, Bijendra"
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CRISPR/Cas9 Mediated Genome Engineering for Improvement of Horticultural Crops
by
Karkute, Suhas G.
,
Singh, Achuit K.
,
Singh, Prabhakar M.
in
Agricultural production
,
Biosynthesis
,
Biotechnology
2017
Horticultural crops are an important part of agriculture for food as well as nutritional security. However, several pests and diseases along with adverse abiotic environmental factors pose a severe threat to these crops by affecting their quality and productivity. This warrants the effective and accelerated breeding programs by utilizing innovative biotechnological tools that can tackle aforementioned issues. The recent technique of genome editing by Clustered Regularly Interspaced Short Palindromic Repeats/CRISPR associated 9 (CRISPR/Cas9) has greatly advanced the breeding for crop improvement due to its simplicity and high efficiency over other nucleases such as Zinc Finger Nucleases and Transcription Activator Like Effector Nucleases. CRISPR/Cas9 tool contains a non-specific Cas9 nuclease and a single guide RNA that directs Cas9 to the specific genomic location creating double-strand breaks and subsequent repair process creates insertion or deletion mutations. This is currently the widely adopted tool for reverse genetics, and crop improvement in large number of agricultural crops. The use of CRISPR/Cas9 in horticultural crops is limited to few crops due to lack of availability of regeneration protocols and sufficient sequence information in many horticultural crops. In this review, the present status of applicability of CRISPR/Cas9 in horticultural crops was discussed along with the challenges and future potential for possible improvement of these crops for their yield, quality, and resistance to biotic and abiotic stress.
Journal Article
Drought mediated physiological and molecular changes in muskmelon (Cucumis melo L.)
by
Ansari, Waquar Akhter
,
Singh, Bijendra
,
Pandey, Sudhakar
in
Abiotic stress
,
Ascorbic acid
,
Biochemistry
2019
Water deficiency up to a certain level and duration leads to a stress condition called drought. It is a multi-dimensional stress causing alteration in the physiological, morphological, biochemical, and molecular traits in plants resulting in improper plant growth and development. Drought is one of the major abiotic stresses responsible for loss of crops including muskmelon (Cucumis melo. L). Muskmelon genotype SC-15, which exhibits high drought resistance as reported in our earlier reports, was exposed to deficient water condition and studied for alteration in physiological, molecular and proteomic profile changes in the leaves. Drought stress results in reduced net photosynthetic rate (Pn), stomatal conductance (Gs) and transpiration (E) rate. With expanded severity of drought, declination recorded in content of total chlorophyll and carotenoid while enhancement observed in phenol content indicating generation of oxidative stress. In contrary, activities of catalase (CAT), superoxide dismutase (SOD), ascorbate peroxidase (APX), and guaiacol (POD) were increased under drought stress. Peptide mass fingerprinting (PMF) showed that drought increased the relative abundance of 38 spots while decreases10 spots of protein. The identified proteins belong to protein synthesis, photosynthesis, nucleotide biosynthesis, stress response, transcription regulation, metabolism, energy and DNA binding. A drought-induced MADS-box transcription factor was identified. The present findings indicate that under drought muskmelon elevates the abundance of defense proteins and suppresses catabolic proteins. The data obtained exhibits possible mechanisms adopted by muskmelon to counter the impacts of drought induced stress.
Journal Article
Variations and similarities in structural, chemical, and elemental properties on the ashes derived from the coal due to their combustion in open and controlled manner
by
Yadav, Virendra Kumar
,
Gupta, Neha
,
Singh, Bijendra
in
Aluminum oxide
,
Aquatic Pollution
,
Ashes
2021
Coal fly ash (CFA) and coal-based incense sticks ash (ISA) have several similarities and differences due to the presence of coal as a common component in both of them. CFA are produced from the combustion of pulverized coal during electricity production in the thermal power plants while ISA are produced from the burning of incense sticks at religious places and at houses. A typical black colored Indian, incense sticks are mainly are comprised of coal powder or potassium nitrate, wood chip, fragrance, binder or binding agent, and bamboo sticks. The black colored incense sticks have coal powder or charcoal as a facilitator for smoother burning of incense sticks. The detailed investigation of CFA and ISA by X-ray fluorescence spectroscopy (XRF), electron diffraction spectroscopy (EDS), inductively coupled plasma-atomic emission spectroscopy (ICP-AES), Fourier transform-infrared (FTIR), X-ray diffraction (XRD), particle size analyzer (PSA), field emission scanning electron microscopy (FESEM), and transmission electron microscopy (TEM) revealed the morphological, chemical, and elemental properties. Both the coal based ashes comprises minerals like calcites, silicates, ferrous, alumina, and traces of Mg, Na, K, P, Ti, and numerous toxic heavy metals as confirmed by the XRF, ICP-AES, and EDS. While, microscopy revealed the presence of well-organized spherical shaped particles, namely cenospheres, plerospheres, and ferrospheres of size varying from 0.02 μm to 7 microns in CFA. Whereas, ISA particles are irregular, aggregated, calcium to carbon rich whose size varies from 60 nm to 9 microns and absence of well-organized spherical structures. The well developed and crystalline structure in CFA is due to the controlled combustion parameter in thermal power plants during the burning of coal while incense sticks (IS) burning is under uncontrolled manner. So, FTIR and XRD confirmed that the major portion of fly ash constitutes crystalline minerals whereas ISA have mainly amorphous phase minerals. CFA have ferrospheres of both rough and smooth surfaced, which was absent from the ISA and hence ferrous particles of CFA are of high magnetic strength. The detailed investigation of ashes will lead to the applications of ashes in new fields, which will minimize the solid waste pollution in the environment.
Journal Article
Physiological and Molecular Responses of Underutilized Genotype AHK-200 of Vegetable Melon (Cucumis melo var. melo) Against Drought Stress: Gas Exchange, Antioxidant Activity, and Gene Expression
by
Ansari, Waquar Akhter
,
Jaiswal, Durgesh Kumar
,
Krishna, Ram
in
Abiotic stress
,
Adaptation
,
Agricultural production
2025
Background/Objectives: Drought stress is a significant environmental challenge that affects plant growth and productivity. Methods: In this study, an underutilized and better drought stress tolerance genotype of Cucumis melo var. melo, i.e., AHK-200, was investigated for drought tolerance potential, with special emphasis on various morphological, physiological, biochemical, and molecular parameters. Results: Our findings show that AHK-200 demonstrates superior drought tolerance with an enhanced root length, better water retention capacity, and stable cell membrane integrity under water deficit conditions. Physiologically, AHK-200 exhibited minimal reduction in relative water content (RWC) and photosynthetic efficiency (PN), along with increased stomatal conductance (gs) and chlorophyll content and reduced photoinhibition under drought stress. Biochemically, AHK-200 showed higher antioxidant enzyme activity (APX, CAT, SOD, GR, POD) and osmolyte accumulation (proline), which are critical for mitigating oxidative stress. At the molecular level, drought-related genes such as DREB2C, DREB2D, and RD22 were upregulated, supporting AHK-200 resilience to drought stress. Additionally, AHK-200 displayed elevated mineral concentrations, including Na, K, Ca, and Fe, which are essential for cellular homeostasis and stress adaptation. Conclusions: Overall, our study provides a comprehensive understanding of the drought tolerance mechanisms in AHK-200, highlighting its potential for use in breeding drought-tolerant genotypes in cucurbits and related crops. This research could guide future efforts in gene manipulation and transgenic development aimed at enhancing drought resistance and yield potential in crop plants. Furthermore, DREB2C, DREB2D, and RD22 transcription factors regulate many pathways related to stress; the overexpression of these genes may open a new avenue in melon improvement against drought stress.
Journal Article
Remediation of Methyl Red Dye from Aqueous Solutions by Using Biosorbents Developed from Floral Waste
by
Yadav, Virendra Kumar
,
Pathan, Sabir Khan
,
Osman, Haitham
in
Aqueous solutions
,
Carbonyl groups
,
Carbonyl powders
2023
The disposal of biological waste into water bodies is a major global concern as it leads to water pollution resulting in the loss of plenty of revenue in the cleaning of water bodies. Here, in the present research work, sacred flowers were collected, segregated, sun-dried, and powdered. The dried floral powders (marigold and rose) were characterized by field emission scanning electron microscopy (FESEM), electron diffraction spectroscopy (EDS), Fourier transforms infrared spectroscopy (FT-IR), and X-ray diffraction (XRD). The microscopy revealed the irregular spherical shape of the sheet-like structure whose size varies in microns. The EDS revealed the elemental composition which was dominated by mainly carbon and oxygen. The XRD shows the presence of carbon (10-25ɵ) in the amorphous form and the absence of any crystalline phase in the biosorbents. The FT-IR showed peaks that conformed to the presence of functional groups like -OH and a carbonyl group. The dried powders were used as an economical and eco-friendly biosorbent for the removal of methyl red (MR) dye from the aqueous solutions by batch adsorption study. After 60 minutes of contact time, the marigold powder (MGP) and rose petal powder (RPP) showed decolorization of 61.16% and 56.08% for 2 ppm of MR dye. The kinetic revealed that the dye removal reaction does not follow the pseudo-first-order as well as the pseudo-second-order. The utilization of such waste-based biosorbents will minimize solid waste and also will provide an economical biosorbent for the removal of environmental pollutants.
Journal Article
Development and characterization of penta-flowering and triple-flowering genotypes in garden pea (Pisum sativum L. var. hortense)
by
Singh, Prabhakar M.
,
Singh, Bijendra
,
Mishra, Gyan P.
in
Biology and Life Sciences
,
Cultivars
,
Environmental factors
2018
This study reports the development of a garden pea genotype 'VRPM-901-5' producing five flowers per peduncle at multiple flowering nodes, by using single plant selection approach from a cross 'VL-8 × PC-531'. In addition, five other stable genetic stocks, namely VRPM-501, VRPM-502, VRPM-503, VRPM-901-3 and VRPSeL-1 producing three flowers per peduncle at multiple flowering nodes were also developed. All these unique genotypes were of either mid- or late- maturity groups. Furthermore, these multi-flowering genotypes were identified during later generations (F4 onward), which might be because of fixation of certain QTLs or recessive gene combinations. Surprisingly, a common parent PC-531, imparting multi-flowering trait in ten cross combinations was identified. Thus, the genotype PC-531 seems to harbor some recessive gene(s) or QTLs that in certain combination(s) express the multi-flowering trait. The interaction between genotype and environment showed that temperature (11-20°C) plays a key role in expression of the multi-flowering trait besides genetic background. Furthermore, the possible relationship between various multi-flowering regulatory genes such as FN, FNA, NEPTUNE, SN, DNE, HR and environmental factors was also explored, and a comprehensive model explaining the multi-flowering trait in garden pea is proposed.
Journal Article
Profiling of polyphenols in phalsa (Grewia asiatica L) fruits based on liquid chromatography high resolution mass spectrometry
by
Koley, Tanmay Kumar
,
Khan, Zareen
,
Oulkar Dasharath
in
Anthocyanins
,
Chromatography
,
Flavanols
2020
The aim of the study was to screen the metabolite profile of phalsa (Grewia asiatica), an underutilized fruit crop, using liquid chromatography-high resolution mass spectrometric analysis. A total of 50 compounds were tentatively identified based on their molecular mass and characteristic fragment ions, each with less than 5 ppm of mass error. These compounds included 21 flavonols, 2 dihydroflavonols, 7 flavones, 3 flavanols, 6 anthocyanins, 3 isoflavonoids, 2 phenolic acids, 2 flavanones, and 4 other phenolics. Flavonols were the predominant group of compounds, representing around 52.6% of the total phenolics. The paper has also discussed the potentiality of phalsa as an emerging functional food for the management of various human diseases in relation to the existing literature.
Journal Article
A novel monopartite begomovirus and satellites associated with yellow mosaic disease of Sida spp. in India
2021
Begomoviruses (family Geminiviridae) cause severe diseases in many economically important crops and non-cultivated plants in the warmer regions of the world. Non-cultivated weeds have been reported to act as natural virus reservoirs. In January 2016, Sida plants with yellow mosaic symptoms were found at the edge of an agricultural field in Gujarat, India. Sequence analysis of the viral genomic components cloned from a diseased Sida plant indicated the presence of a distinct monopartite begomovirus (proposed as sida yellow mosaic Gujarat virus) along with a betasatellite (ludwigia leaf distortion betasatellite) and an alphasatellite (malvastrum yellow mosaic alphasatellite). Our results emphasize that this weed may harbor a begomovirus-alphasatellite-betasatellite complex. This host serves as a potential source of virus inoculum, which can be transmitted by whiteflies to other cultivated crops.
Journal Article
Salt Tolerant Eggplant Rootstocks Modulate Sodium Partitioning in Tomato Scion and Improve Performance under Saline Conditions
by
Rai, Arvind Kumar
,
Singh, Bijendra
,
Kumar, Ashwani
in
Abiotic stress
,
Accumulation
,
Agricultural production
2022
Grafting on salt tolerant eggplant rootstocks can be a promising approach for enhancing the salinity tolerance of tomato. In this study, the performance of tomato cv. Kashi Aman grafted on two salt tolerant eggplant rootstocks (IC-111056 and IC-354557) was evaluated against non-grafted control under saline (ECiw 6 and 9 dS m−1) and non-saline (ECiw ~1 dS m−1) irrigation for 2 years. Grafting improved tomato plant performance under salt stress. Moreover, rootstock IC-111056 outperformed IC-354557. An increase in the average fruit yield of grafted plants compared with non-grafted control at 6 and 9 dS m−1 was 24.41% and 55.84%, respectively with rootstock IC-111056 and 20.25% and 49.08%, respectively with IC-354557. Grafted plants maintained a superior water status under saline irrigation, evidenced with the relative water content and chlorophyll SPAD index, along with higher proline and antioxidant enzyme activities (superoxide dismutase, catalase, and ascorbate peroxidase). Rootstocks mediated the partitioning of toxic saline ions in the scions by promoting higher Na+ accumulation (14% of mean accumulation) in the older leaves and lower (24%) in the younger leaves of grafted plants. This resulted in higher K+/Na+ ratios within the younger (active) leaves of the grafted plants. Our study demonstrates that grafting tomato seedlings on selected salt tolerant eggplant rootstocks is a viable alternative for improving plant physiological status and fruit yield under salt stress, through favorable modulation of salt ion partitioning in the scions.
Journal Article
Recent trends in the nanozeolites-based oxygen concentrators and their application in respiratory disorders
by
Yadav, Virendra Kumar
,
Singh, Bijendra
,
Paital, Biswaranjan
in
Asthma
,
chabazite
,
Coronaviruses
2023
Medical-grade oxygen is the basic need for all medical complications, especially in respiratory-based discomforts. There was a drastic increase in the demand for medical-grade oxygen during the current pandemic. The non-availability of medical-grade oxygen led to several complications, including death. The oxygen concentrator was only the last hope for the patient during COVID-19 pandemic around the globe. The demands also are everlasting during other microbial respiratory infections. The yield of oxygen using conventional molecular zeolites in the traditional oxygen concentrator process is less than the yield noticed when its nano-form is used. Nanotechnology has enlightened hope for the efficient production of oxygen by such oxygen concentrators. Here in the current review work, the authors have highlighted the basic structural features of oxygen concentrators along with the current working principle. Besides, it has been tried to bridge the gap between conventional oxygen concentrators and advanced ones by using nanotechnology. Nanoparticles being usually within 100 nm in size have a high surface area to volume ratio, which makes them suitable adsorbents for oxygen. Here authors have suggested the use of nano zeolite in place of molecular zeolites in the oxygen concentrator for efficient delivery of oxygen by the oxygen concentrators.
Journal Article