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43
result(s) for
"Soba, Peter"
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The elegance of prickly sensations
2022
Neurons sensing harmful mechanical forces in the larvae of fruit flies have a striking architecture of dendrites that are optimized to detect pointy objects.Neurons sensing harmful mechanical forces in the larvae of fruit flies have a striking architecture of dendrites that are optimized to detect pointy objects.
Journal Article
BiPOLES is an optogenetic tool developed for bidirectional dual-color control of neurons
by
Dieter, Alexander
,
Papagiakoumou, Eirini
,
Zhou, Fangmin
in
14/69
,
631/1647/2253
,
631/1647/328/2057
2021
Optogenetic manipulation of neuronal activity through excitatory and inhibitory opsins has become an indispensable experimental strategy in neuroscience research. For many applications bidirectional control of neuronal activity allowing both excitation and inhibition of the same neurons in a single experiment is desired. This requires low spectral overlap between the excitatory and inhibitory opsin, matched photocurrent amplitudes and a fixed expression ratio. Moreover, independent activation of two distinct neuronal populations with different optogenetic actuators is still challenging due to blue-light sensitivity of all opsins. Here we report BiPOLES, an optogenetic tool for potent neuronal excitation and inhibition with light of two different wavelengths. BiPOLES enables sensitive, reliable dual-color neuronal spiking and silencing with single- or two-photon excitation, optical tuning of the membrane voltage, and independent optogenetic control of two neuronal populations using a second, blue-light sensitive opsin. The utility of BiPOLES is demonstrated in worms, flies, mice and ferrets.
Currently, bidirectional control of activity in the same neurons in the same experiment is difficult. Here the authors report a Bidirectional Pair of Opsins for Light-induced Excitation and Silencing, BiPOLES, which they use in a range of organisms including worms, fruit flies, mice and ferrets.
Journal Article
Sensory integration and neuromodulatory feedback facilitate Drosophila mechanonociceptive behavior
2017
Noxious thermal and mechanical stimuli have to be faithfully detected and avoided to ensure survival. In this study, the authors uncover a modality-specific circuit responsible specifically for mechanonociceptive behavior in
Drosophila
. They show that the escape response to mechanical but not thermal noxious stimuli requires multisensory integration by mechanosensory neurons and neuromodulatory feedback signaling.
Nociception is an evolutionarily conserved mechanism to encode and process harmful environmental stimuli. Like most animals,
Drosophila melanogaster
larvae respond to a variety of nociceptive stimuli, including noxious touch and temperature, with stereotyped escape responses through activation of multimodal nociceptors. How behavioral responses to these different modalities are processed and integrated by the downstream network remains poorly understood. By combining trans-synaptic labeling, ultrastructural analysis, calcium imaging, optogenetics and behavioral analyses, we uncovered a circuit specific for mechanonociception but not thermonociception. Notably, integration of mechanosensory input from innocuous and nociceptive sensory neurons is required for robust mechanonociceptive responses. We further show that neurons integrating mechanosensory input facilitate primary nociceptive output by releasing short neuropeptide F, the
Drosophila
neuropeptide Y homolog. Our findings unveil how integration of somatosensory input and neuropeptide-mediated modulation can produce robust modality-specific escape behavior.
Journal Article
Individual lipid alterations at the origin of neuronal Ceramide Synthase defects
2025
The brain is highly susceptible to disturbances in lipid metabolism. Among the rare, genetically-linked epilepsies Progressive Myoclonic Epilepsy Type 8 (PME8), associated with the loss of Ceramide Synthase (CerS) activity, causes epileptic symptoms accompanied by early onset of neurodegenerative traits. The function of CerS is embedded in a complex, conserved metabolic pathway, making it difficult to identify the specific disease-relevant alterations. Here, we show that the expression of an enzymatically inactive c erS allele in Drosophila sensory neurons yielded developmental and early onset dendrite loss. Combining lipidomics and refined genetics with quantitative analysis of neuronal morphology in cerS mutants, we identified which lipids species are dysregulated and how they affect neuronal morphology. In cerS mutants, long and very-long acyl-chain C18-C24-ceramides were missing and necessary for dendrite elaboration. In addition, the substrate of CerS, (dh)S, and its metabolite (dh)S1P, increased. Especially increasing (dh)S1P strongly reduces dendritic complexity in cerS mutant neurons. Finally, we performed in vivo experiments to cell-autonomously rescue the morphological defects of cerS mutant neurons and report that a complete rescue can only be achieved if the toxic CerS substrate is converted to produce specific (C18-C24) ceramides. Thus, despite the complex metabolic alterations, our data provides essential information about the metabolic origin of PME8 and delineates a potential therapeutic avenue.
Journal Article
Neural circuits underlying context-dependent competition between defensive actions in Drosophila larvae
2025
To ensure their survival, animals must be able to respond adaptively to threats within their environment. However, the precise neural circuit mechanisms that underlie flexible defensive behaviors remain poorly understood. Using neuronal manipulations, machine learning-based behavioral detection, electron microscopy (EM) connectomics and calcium imaging in
Drosophila
larvae, we map second-order interneurons that are differentially involved in the competition between defensive actions in response to competing aversive cues. We find that mechanosensory stimulation inhibits escape behaviors in favor of startle behaviors by influencing the activity of escape-promoting second-order interneurons. Stronger activation of those neurons inhibits startle-like behaviors. This suggests that competition between startle and escape behaviors occurs at the level of second-order interneurons. Finally, we identify a pair of descending neurons that promote startle behaviors and could modulate the escape sequence. Taken together, these results characterize the pathways involved in startle and escape competition, which is modulated by the sensory context.
Neural circuit mechanisms underlying flexible defensive behaviors are not fully understood. Here authors show that mechanosensory information favors startle actions and activation of nociceptive pathways inhibits startle and promotes escape. Sensory context shapes the competitive selection between defensive actions by modulating the activity of escape promoting and startle inhibiting neurons.
Journal Article
A bistable inhibitory optoGPCR for multiplexed optogenetic control of neural circuits
by
Oren-Suissa, Meital
,
Benjamin, Asaf
,
Bruchas, Michael R.
in
631/378/340
,
631/378/548
,
631/443/376
2024
Information is transmitted between brain regions through the release of neurotransmitters from long-range projecting axons. Understanding how the activity of such long-range connections contributes to behavior requires efficient methods for reversibly manipulating their function. Chemogenetic and optogenetic tools, acting through endogenous G-protein-coupled receptor pathways, can be used to modulate synaptic transmission, but existing tools are limited in sensitivity, spatiotemporal precision or spectral multiplexing capabilities. Here we systematically evaluated multiple bistable opsins for optogenetic applications and found that the
Platynereis dumerilii
ciliary opsin (
Pd
CO) is an efficient, versatile, light-activated bistable G-protein-coupled receptor that can suppress synaptic transmission in mammalian neurons with high temporal precision in vivo.
Pd
CO has useful biophysical properties that enable spectral multiplexing with other optogenetic actuators and reporters. We demonstrate that
Pd
CO can be used to conduct reversible loss-of-function experiments in long-range projections of behaving animals, thereby enabling detailed synapse-specific functional circuit mapping.
Pd
CO is a switchable optogenetic tool for inhibiting synaptic transmission in neuronal terminals in vivo, as demonstrated in a variety of contexts mainly in the mouse.
Journal Article
Editorial: Connecting Form and Function: Recent Advances in Understanding Dendrite Morphogenesis and Plasticity
2022
A clonal screen by the Wang et al. identified 40 new genes involved in dendrite morphogenesis in Drosophila somatosensory neurons, revealing the importance of tubulin folding, Nogo signaling, RNA splicing, phosphoinositides, and glycosylation. Besides the cell intrinsic machinery, extrinsic mechanisms define many aspects of dendrite patterning across organisms. Because the molecular machinery governing dendrite development and plasticity is extremely complex, its components are often affected during aging and in neurological and neurodegenerative diseases. Additionally, injury-related kinase signaling pathways play a significant role in localized degeneration and regeneration (Furusawa and Emoto). Besides specific signaling pathways, global mechanisms have a profound impact on preserving dendritic homeostasis.
Journal Article
Optimized design and in vivo application of optogenetically functionalized Drosophila dopamine receptors
by
Francisco J. Rodriguez Jimenez
,
Bibi Nusreen Imambocus
,
Kathrin Sauter
in
13/51
,
13/89
,
14/19
2023
Neuromodulatory signaling
via
G protein-coupled receptors (GPCRs) plays a pivotal role in regulating neural network function and animal behavior. The recent development of optogenetic tools to induce G protein-mediated signaling provides the promise of acute and cell type-specific manipulation of neuromodulatory signals. However, designing and deploying optogenetically functionalized GPCRs (optoXRs) with accurate specificity and activity to mimic endogenous signaling in vivo remains challenging. Here we optimize the design of optoXRs by considering evolutionary conserved GPCR-G protein interactions and demonstrate the feasibility of this approach using two
Drosophila
Dopamine receptors (optoDopRs). These optoDopRs exhibit high signaling specificity and light sensitivity in vitro. In vivo, we show receptor and cell type-specific effects of dopaminergic signaling in various behaviors, including the ability of optoDopRs to rescue the loss of the endogenous receptors. This work demonstrates that optoXRs can enable optical control of neuromodulatory receptor-specific signaling in functional and behavioral studies.
Designing optogenetically functionalized G protein-coupled receptors (optoXRs) to mimic endogenous signaling in vivo is challenging. Here, the authors optimize the design of optoXRs by considering evolutionary conserved protein interactions, and they employ this approach in fruit flies.
Journal Article
Optogenetic delivery of trophic signals in a genetic model of Parkinson’s disease
by
Furthmann, Nikolas
,
Biebl, Julia
,
Ingles-Prieto, Alvaro
in
1-Phosphatidylinositol 3-kinase
,
AKT protein
,
Animals
2021
Optogenetics has been harnessed to shed new mechanistic light on current and future therapeutic strategies. This has been to date achieved by the regulation of ion flow and electrical signals in neuronal cells and neural circuits that are known to be affected by disease. In contrast, the optogenetic delivery of trophic biochemical signals, which support cell survival and are implicated in degenerative disorders, has never been demonstrated in an animal model of disease. Here, we reengineered the human and Drosophila melanogaster REarranged during Transfection (hRET and dRET) receptors to be activated by light, creating one-component optogenetic tools termed Opto-hRET and Opto-dRET. Upon blue light stimulation, these receptors robustly induced the MAPK/ERK proliferative signaling pathway in cultured cells. In PINK1 B9 flies that exhibit loss of PTEN-induced putative kinase 1 ( PINK1 ), a kinase associated with familial Parkinson’s disease (PD), light activation of Opto-dRET suppressed mitochondrial defects, tissue degeneration and behavioral deficits. In human cells with PINK1 loss-of-function, mitochondrial fragmentation was rescued using Opto-dRET via the PI3K/NF-кB pathway. Our results demonstrate that a light-activated receptor can ameliorate disease hallmarks in a genetic model of PD. The optogenetic delivery of trophic signals is cell type-specific and reversible and thus has the potential to inspire novel strategies towards a spatio-temporal regulation of tissue repair.
Journal Article
Maintenance of cell type-specific connectivity and circuit function requires Tao kinase
by
Pedersen, Lisa Hedegaard
,
Tenedini, Federico Marcello
,
Petruzzi, Mabel Matamala
in
14/10
,
14/19
,
147/28
2019
Sensory circuits are typically established during early development, yet how circuit specificity and function are maintained during organismal growth has not been elucidated. To gain insight we quantitatively investigated synaptic growth and connectivity in the
Drosophila
nociceptive network during larval development. We show that connectivity between primary nociceptors and their downstream neurons scales with animal size. We further identified the conserved Ste20-like kinase Tao as a negative regulator of synaptic growth required for maintenance of circuit specificity and connectivity. Loss of Tao kinase resulted in exuberant postsynaptic specializations and aberrant connectivity during larval growth. Using functional imaging and behavioral analysis we show that loss of Tao-induced ectopic synapses with inappropriate partner neurons are functional and alter behavioral responses in a connection-specific manner. Our data show that fine-tuning of synaptic growth by Tao kinase is required for maintaining specificity and behavioral output of the neuronal network during animal growth.
It is unclear how circuit specificity and function are maintained during organismal growth. In this study, authors show that connectivity between primary nociceptors and their downstream neurons scales with animal size and that Ste20-like kinase Tao acts as a negative regulator of synaptic growth required for maintenance of circuit specificity and connectivity.
Journal Article