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Understanding abundance and trends of beaked whales in the heavily industrialized Gulf of America (formerly Gulf of Mexico), is critical for management but challenging with visual-based distance-sampling due to their elusive surface behavior. Acoustic-based distance-sampling methods rely on accurate modeling of detection probability as a function of distance from a recorder, requiring population-specific diving and acoustic behavior parameters, which is currently lacking for Gulf populations. To address this, we used passive acoustic tracking with two 4-channel High-Frequency Acoustic Recording Packages (HARPs) deployed off Louisiana (~1100 m depth) in 2021. Echolocation clicks detected on both recorders were localized in 3D to characterize acoustic and diving behavior. These data informed a Monte Carlo cue-based simulation to estimate the probability of detection by a near-seafloor single-sensor HARP. A trial-based approach also estimated detection probability as a function of range to a single-channel sensor deployed at the site. Results show species-specific differences. Goose-beaked whales ( Ziphius cavirostris ), were detected for longer periods during foraging dives (n = 24 dives, mean: 20.5 min; range: 7–42) compared with Blainville’s ( Mesoplodon densirostris , n = 2 dives, 13.6 min; 11–16) and Gervais’ ( Mesoplodon europaeus , n = 24 dives, 12.7 min; 7–19) beaked whales. Maximum dive depths also differed, with some goose-beaked whales foraging at or near the seafloor. Descent and ascent rates were similar within species but differed among them (1.34/1.40 m/s for goose-beaked and 1.15/1.19 m/s for Gervais’ beaked whales). Source level and broadband directivity index were estimated at 225 dB pp re 1 μPa-1m and 26 dB for goose-beaked whales, and 218 dB pp re 1 μPa-1m and 20 dB for Gervais’ beaked whales. Estimates were not possible for Blainville’s beaked whales due to limited data. In both the Monte Carlo simulation and trial-based approach, detection probability declined sharply with ranges, reflecting the highly directional beam of beaked whale echolocation clicks.

Delphinids produce large numbers of short duration, broadband echolocation clicks which may be useful for species classification in passive acoustic monitoring efforts. A challenge in echolocation click classification is to overcome the many sources of variability to recognize underlying patterns across many detections. An automated unsupervised network-based classification method was developed to simulate the approach a human analyst uses when categorizing click types: Clusters of similar clicks were identified by incorporating multiple click characteristics (spectral shape and inter-click interval distributions) to distinguish within-type from between-type variation, and identify distinct, persistent click types. Once click types were established, an algorithm for classifying novel detections using existing clusters was tested. The automated classification method was applied to a dataset of 52 million clicks detected across five monitoring sites over two years in the Gulf of Mexico (GOM). Seven distinct click types were identified, one of which is known to be associated with an acoustically identifiable delphinid (Risso's dolphin) and six of which are not yet identified. All types occurred at multiple monitoring locations, but the relative occurrence of types varied, particularly between continental shelf and slope locations. Automatically-identified click types from autonomous seafloor recorders without verifiable species identification were compared with clicks detected on sea-surface towed hydrophone arrays in the presence of visually identified delphinid species. These comparisons suggest potential species identities for the animals producing some echolocation click types. The network-based classification method presented here is effective for rapid, unsupervised delphinid click classification across large datasets in which the click types may not be known a priori.

Distribution models are needed to understand spatiotemporal patterns in cetacean occurrence and to mitigate anthropogenic impacts. Shipboard line-transect visual surveys are the standard method for estimating abundance and describing the distributions of cetacean populations. Ship-board surveys provide high spatial resolution but lack temporal resolution and seasonal coverage. Stationary passive acoustic monitoring (PAM) employs acoustic sensors to sample point locations nearly continuously, providing high temporal resolution in local habitats across days, seasons and years. To evaluate whether cross-platform data synthesis can improve distribution predictions, models were developed for Cuvier’s beaked whales, sperm whales, and Risso’s dolphins in the oceanic Gulf of Mexico using two different methods: generalized additive models and neural networks. Neural networks were able to learn unspecified interactions between drivers. Models that incorporated PAM datasets out-performed models trained on visual data alone, and joint models performed best in two out of three cases. The modeling results suggest that, when taken together, multiple species distribution models using a variety of data types may support conservation and management of Gulf of Mexico cetacean populations by improving the understanding of temporal and spatial species distribution trends.

Climate change and climate variability are affecting marine mammal species and these impacts are projected to continue in the coming decades. Vulnerability assessments provide a framework for evaluating climate impacts over a broad range of species using currently available information. We conducted a trait-based climate vulnerability assessment using expert elicitation for 108 marine mammal stocks and stock groups in the western North Atlantic, Gulf of Mexico, and Caribbean Sea. Our approach combined the exposure (projected change in environmental conditions) and sensitivity (ability to tolerate and adapt to changing conditions) of marine mammal stocks to estimate vulnerability to climate change, and categorize stocks with a vulnerability index. The climate vulnerability score was very high for 44% (n = 47) of these stocks, high for 29% (n = 31), moderate for 20% (n = 22), and low for 7% (n = 8). The majority of stocks (n = 78; 72%) scored very high exposure, whereas 24% (n = 26) scored high, and 4% (n = 4) scored moderate. The sensitivity score was very high for 33% (n = 36) of these stocks, high for 18% (n = 19), moderate for 34% (n = 37), and low for 15% (n = 16). Vulnerability results were summarized for stocks in five taxonomic groups: pinnipeds (n = 4; 25% high, 75% moderate), mysticetes (n = 7; 29% very high, 57% high, 14% moderate), ziphiids (n = 8; 13% very high, 50% high, 38% moderate), delphinids (n = 84; 52% very high, 23% high, 15% moderate, 10% low), and other odontocetes (n = 5; 60% high, 40% moderate). Factors including temperature, ocean pH, and dissolved oxygen were the primary drivers of high climate exposure, with effects mediated through prey and habitat parameters. We quantified sources of uncertainty by bootstrapping vulnerability scores, conducting leave-one-out analyses of individual attributes and individual scorers, and through scoring data quality for each attribute. These results provide information for researchers, managers, and the public on marine mammal responses to climate change to enhance the development of more effective marine mammal management, restoration, and conservation activities that address current and future environmental variation and biological responses due to climate change.

Rorqual foraging behavior varies with species, prey type and foraging conditions, and can be a determining factor for their fitness. Little is known about the foraging ecology of Rice’s whales ( Balaenoptera ricei ), an endangered species with a population of fewer than 100 individuals. Suction cup tags were attached to two Rice’s whales to collect information on their diving kinematics and foraging behavior. The tagged whales primarily exhibited lunge-feeding near the sea bottom and to a lesser extent in the water-column and at the sea surface. During 6–10 min foraging dives, the whales typically circled their prey before executing one or two feeding lunges. Longer duration dives and dives with more feeding-lunges were followed by an increase in their breathing rate. The median lunge rate of one lunge per dive of both animals was much lower than expected based on comparative research on other lunge-feeding baleen whales, and may be associated with foraging on fish instead of krill or may be an indication of different foraging conditions. Both animals spent extended periods of the night near the sea surface, increasing the risk for ship strike. Furthermore, their circling before lunging may increase the risk for entanglement in bottom-longline fishing gear. Overall, these data show that Rice’s whale foraging behavior differs from other lunge feeding rorqual species and may be a significant factor in shaping our understanding of their foraging ecology. Efforts to mitigate threats to Rice’s whales will benefit from improved understanding of patterns in their habitat use and fine-scale ecology.

Marine Spatial Planning (MSP) provides a process that uses spatial data and models to evaluate environmental, social, economic, cultural, and management trade-offs when siting (i.e., strategically locating) ocean industries. Aquaculture is the fastest-growing food sector in the world. The United States (U.S.) has substantial opportunity for offshore aquaculture development given the size of its exclusive economic zone, habitat diversity, and variety of candidate species for cultivation. However, promising aquaculture areas overlap many protected species habitats. Aquaculture siting surveys, construction, operations, and decommissioning can alter protected species habitat and behavior. Additionally, aquaculture-associated vessel activity, underwater noise, and physical interactions between protected species and farms can increase the risk of injury and mortality. In 2020, the U.S. Gulf of Mexico was identified as one of the first regions to be evaluated for offshore aquaculture opportunities as directed by a Presidential Executive Order. We developed a transparent and repeatable method to identify aquaculture opportunity areas (AOAs) with the least conflict with protected species. First, we developed a generalized scoring approach for protected species that captures their vulnerability to adverse effects from anthropogenic activities using conservation status and demographic information. Next, we applied this approach to data layers for eight species listed under the Endangered Species Act, including five species of sea turtles, Rice’s whale, smalltooth sawfish, and giant manta ray. Next, we evaluated four methods for mathematically combining scores (i.e., Arithmetic mean, Geometric mean, Product, Lowest Scoring layer) to generate a combined protected species data layer. The Product approach provided the most logical ordering of, and the greatest contrast in, site suitability scores. Finally, we integrated the combined protected species data layer into a multi-criteria decision-making modeling framework for MSP. This process identified AOAs with reduced potential for protected species conflict. These modeling methods are transferable to other regions, to other sensitive or protected species, and for spatial planning for other ocean-uses.

Pygmy sperm whales (Kogia breviceps) and dwarf sperm whales (Kogia sima) are deep diving cetaceans that commonly strand along the coast of the southeast US, but that are difficult to study visually at sea because of their elusive behavior. Conventional visual surveys are thought to significantly underestimate the presence of Kogia and they have proven difficult to approach for tracking and tagging. An approach is presented for density estimation of signals presumed to be from Kogia spp. based on passive acoustic monitoring data collected at sites in the Gulf of Mexico (GOM) from the period following the Deepwater Horizon oil spill (2010-2013). Both species of Kogia are known to inhabit the GOM, although it is not possible to acoustically separate the two based on available knowledge of their echolocation clicks. An increasing interannual density trend is suggested for animals near the primary zone of impact of the oil spill, and to the southeast of the spill. Densities were estimated based on both counting individual echolocation clicks and counting the presence of groups of animals during one-min time windows. Densities derived from acoustic monitoring at three sites are all substantially higher (4–16 animals /1000 km2) than those that have been derived for Kogia from line transect visual surveys in the same region (0.5 animals/1000 km2). The most likely explanation for the observed discrepancy is that the visual surveys are underestimating Kogia spp. density, due to the assumption of perfect detectability on the survey trackline. We present an alternative approach for density estimation, one that derives echolocation and behavioral parameters based on comparison of modeled and observed sound received levels at sites of varying depth.

Killer whales occur in the Gulf of Mexico (GoMex) and the North Atlantic, including off the southeastern United States (SEUS). Data from cetacean surveys during 1990 – 2021 and other sources were combined to assess killer whale biology, including spatial and temporal distribution, social structure, genetics, morphology, acoustics, and predatory behavior. GoMex records occurred predominantly in oceanic waters (>200 m) during spring and summer. SEUS records occurred primarily in winter and spring off the North Carolina region along the shelf-edge and deeper waters, and off the east coast of Florida. Photo-identification analysis of GoMex killer whales resulted in 49 individuals sighted up to seven times with sighting histories up to 26 years, and social analysis provided evidence of long-term relationships up to 16 years. The GoMex genetic samples revealed two mtDNA haplotypes, one of which does not match any outside the GoMex. Most GoMex whales had wide non-faint saddle patches and many had cookiecutter shark scars while no scars were noted on SEUS whales. Three groups recorded in the GoMex made few calls, but a group harassing sperm whales produced many. Cetaceans and tuna are known prey in the GoMex and SEUS, respectively. Directed studies of killer whales in the GoMex areas would be difficult to implement as this species is very rare. It is therefore important to pursue ongoing efforts to collect behavioral, acoustic and any biological samples that will contribute to improve our understanding of the biology and ecology of killer whales in tropical and subtropical regions.

Shortly after the Deepwater Horizon oil spill began in April 2010, a widely spaced passive acoustic monitoring array was deployed in the northeastern Gulf of Mexico to document the impacts of this unprecedentedly large and deep offshore oil spill on oceanic marine mammals. The array was subsequently maintained for over a decade. Here we document decadal density declines for seven of eight monitored species groups, including sperm whales (up to 31%), beaked whales (up to 83%), and small delphinids (up to 43%). Declines were observed both within and outside of the surface oil footprint. Though not conclusively linked to the oil spill, the broad spatial and temporal scale of these declines observed for disparate marine mammal species is consistent with Deepwater Horizon impacts. These declines have exceeded and outlasted post-spill damage assessment predictions, suggesting that the offshore ecosystem impacts of Deepwater Horizon may have been larger than previously thought. Whale and delphinid numbers in the Gulf of Mexico have declined by up to 83% in the ten years following the Deepwater Horizon oil spill, according to analysis of passive acoustic monitoring data.

Habitat characterization allows prediction of dolphin distributions in response to oceanographic processes and can be used to understand and predict effects of anthropogenic disturbances. Many habitat models focus on contemporary dolphin occurrence and environmental predictor data, but time-lagged oceanographic data may increase a model’s predictive power due to ecological successional processes. Using hourly occurrence of Risso’s dolphinGrampus griseusclicks and 2 types of Pacific white-sided dolphinLagenorhynchus obliquidensclicks in autonomous passive acoustic recordings, we investigate the importance of time-lagged predictor variables with generalized additive models. These models relate dolphin acoustic activity from recordings at 6 sites in the Southern California Bight between August 2005 and December 2007 to oceanographic variables including sea surface temperature (SST), SST coefficient of variation (CV), sea surface chlorophyll concentration (chl), chl CV, upwelling indices, and solar and lunar temporal indices. The most consistently selected variables among the trial models evaluated during cross-validation were SST (100% of models) and SST CV (80%) for Risso’s dolphin clicks; solar indices (100%) and SST and SST CV (60% each) for Pacific white-sided type A (PWS A) clicks; and SST CV (100%), solar indices (100%) and SST (80%) for Pacific white-sided type B (PWS B) clicks. Best predictive models for Risso’s dolphins and PWS A clicks included time-lagged variables, suggesting the importance of ecological succession between abiotic variables and dolphin occurrence, while best models of PWS B clicks were for current conditions, suggesting association with prey-aggregating features such as fronts and eddies.