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"Stanley, William"
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Assessing Monkeypox Virus Prevalence in Small Mammals at the Human–Animal Interface in the Democratic Republic of the Congo
2017
During 2012, 2013 and 2015, we collected small mammals within 25 km of the town of Boende in Tshuapa Province, the Democratic Republic of the Congo. The prevalence of monkeypox virus (MPXV) in this area is unknown; however, cases of human infection were previously confirmed near these collection sites. Samples were collected from 353 mammals (rodents, shrews, pangolins, elephant shrews, a potamogale, and a hyrax). Some rodents and shrews were captured from houses where human monkeypox cases have recently been identified, but most were trapped in forests and agricultural areas near villages. Real-time PCR and ELISA were used to assess evidence of MPXV infection and other Orthopoxvirus (OPXV) infections in these small mammals. Seven (2.0%) of these animal samples were found to be anti-orthopoxvirus immunoglobulin G (IgG) antibody positive (six rodents: two Funisciurus spp.; one Graphiurus lorraineus; one Cricetomys emini; one Heliosciurus sp.; one Oenomys hypoxanthus, and one elephant shrew Petrodromus tetradactylus); no individuals were found positive in PCR-based assays. These results suggest that a variety of animals can be infected with OPXVs, and that epidemiology studies and educational campaigns should focus on animals that people are regularly contacting, including larger rodents used as protein sources.
Journal Article
Consequences of plant-soil feedbacks in invasion
by
Suding, Katharine N.
,
van der Putten, Wim H.
,
Kulmatiski, Andrew
in
Abundance
,
acacia-longifolia
,
accumulation
2013
1. Plant species can influence soil biota, which in turn can influence the relative performance of plant species. These plant-soil feedbacks (PSFs) have been hypothesized to affect many community-level dynamics including species coexistence, dominance and invasion. 2. The importance of PSFs in exotic species invasion, although widely hypothesized, has been difficult to determine because invader establishment necessarily precedes invader-mediated PSFs. Here, we combine a spatial simulation model of invasion that incorporates PSFs with a meta-analysis that synthesizes published case studies describing feedbacks between pairs of native and exotic species. 3. While our spatial model confirmed the link between positive soil feedbacks ('home' advantage) for exotic species and exotic species spread, results were dependent on the initial abundance of the exotic species and the equivalence of dispersal and life history characteristics between exotic and native species. 4. The meta-analysis of 52 native-exotic pairwise feedback comparisons in 22 studies synthesized measures of native and exotic performance in soils conditioned by native and exotic species. The analysis indicated that the growth responses of native species were often greater in soil conditioned by native species than in soil conditioned exotic species (a 'home' advantage). The growth responses of exotic species were variable and not consistently related to species soil-conditioning effects. 5. Synthesis. Overlaying empirical estimates of pairwise PSFs with spatial simulations, we conclude that the empirically measured PSFs between native and exotic plant species are often not consistent with predictions of the spread of exotic species and mono-dominance. This is particularly the case when exotic species are initially rare and share similar dispersal and average fitness characteristics with native species. However, disturbance and other processes that increase the abundance of exotic species as well as the inclusion of species dispersal and life history differences can interact with PSF effects to explain the spread of invasive species.
Journal Article
Correction: Elevational Distribution and Ecology of Small Mammals on Tanzania's Second Highest Mountain
2019
[This corrects the article DOI: 10.1371/journal.pone.0162009.].
Journal Article
Elevational Distribution and Ecology of Small Mammals on Africa’s Highest Mountain
by
Stanley, William T.
,
Munissi, Maiko J.
,
Kihaule, Philip M.
in
Africa
,
Altitude
,
Animal Distribution
2014
Mt Kilimanjaro is Africa's highest mountain, and an icon for a country famous for its mammalian fauna. The distribution and abundance of small mammals on the mountain are poorly known. Here we document the distribution of shrews and rodents along an elevational gradient on the southeastern versant of Kilimanjaro. Five sites were sampled with elevational center points of 2000, 2500, 3000, 3500 and 4000 m, using a systematic methodology of standard traps and pitfall lines, to inventory the shrews and rodents of the slope. Sixteen species of mammal were recorded, including 6 shrew and 10 rodent species, and the greatest diversity of both was found at 3000 m, the elevational midpoint of the transect. No species previously unrecorded on Kilimanjaro were observed. Two genera of rodents that occur in nearby mountains (Hylomyscus and Beamys) were not recorded. Myosorex zinki, the only mammal endemic to Mt. Kilimanjaro, which previously was known by only a few specimens collected in the ericaceous or moorland habitat, was found in all but one (the lowest) of the sites sampled, and was one of the most widespread species of small mammal along the gradient. Two shrews (Crocidura allex and Sylvisorex granti) and one rodent (Dendromus insignis) were found throughout the entire transect, with Dendromus being observed at our highest trap point (4240 m). As in similar faunal surveys on other mountains of Tanzania, rainfall influenced the sample success of shrews, but not rodents. Trap success for rodents at 3500 m was notably low. This study contributes further justification for the conservation of the forest habitat of Mt. Kilimanjaro.
Journal Article
Elevational Distribution and Ecology of Small Mammals on Tanzania's Second Highest Mountain
2016
Mt. Meru is Tanzania's second highest mountain and the ninth highest in Africa. The distribution and abundance of small mammals on this massif are poorly known. Here we document the distribution of shrews and rodents along an elevational gradient on the southeastern versant of Mt. Meru. Five sites were sampled with elevational center points of 1950, 2300, 2650, 3000, and 3600 m, using a systematic methodology of standard traps and pitfall lines, to inventory the shrews and rodents of the slope. Ten species of mammal were recorded, comprising 2 shrew and 8 rodent species with the greatest diversity for each group at 2300 m. No species previously unrecorded on Mt. Meru was observed. Two rodent genera that occur in nearby Eastern Arc Mountains (Hylomyscus and Beamys) were not recorded. The rodent Lophuromys verhageni and a recently described species of shrew, Crocidura newmarki, are the only endemic mammals on Mt. Meru, and were widespread across the elevational gradient. As in similar small mammal surveys on other mountains of Tanzania, rainfall positively influenced trap success rates for shrews, but not for rodents. This study provides new information on the local small mammal fauna of the massif, but numerous other questions remain to be explored. Comparisons are made to similar surveys of other mountains in Tanzania.
Journal Article
Improved Mitochondrial Function with Diet-Induced Increase in Either Docosahexaenoic Acid or Arachidonic Acid in Membrane Phospholipids
by
Polster, Brian M.
,
Hoppel, Charles L.
,
Rosiers, Christine Des
in
Anesthesiology
,
Animals
,
Apoptosis
2012
Mitochondria can depolarize and trigger cell death through the opening of the mitochondrial permeability transition pore (MPTP). We recently showed that an increase in the long chain n3 polyunsaturated fatty acids (PUFA) docosahexaenoic acid (DHA; 22:6n3) and depletion of the n6 PUFA arachidonic acid (ARA; 20:4n6) in mitochondrial membranes is associated with a greater Ca(2+) load required to induce MPTP opening. Here we manipulated mitochondrial phospholipid composition by supplementing the diet with DHA, ARA or combined DHA+ARA in rats for 10 weeks. There were no effects on cardiac function, or respiration of isolated mitochondria. Analysis of mitochondrial phospholipids showed DHA supplementation increased DHA and displaced ARA in mitochondrial membranes, while supplementation with ARA or DHA+ARA increased ARA and depleted linoleic acid (18:2n6). Phospholipid analysis revealed a similar pattern, particularly in cardiolipin. Tetralinoleoyl cardiolipin was depleted by 80% with ARA or DHA+ARA supplementation, with linoleic acid side chains replaced by ARA. Both the DHA and ARA groups had delayed Ca(2+)-induced MPTP opening, but the DHA+ARA group was similar to the control diet. In conclusion, alterations in mitochondria membrane phospholipid fatty acid composition caused by dietary DHA or ARA was associated with a greater cumulative Ca(2+) load required to induced MPTP opening. Further, high levels of tetralinoleoyl cardiolipin were not essential for normal mitochondrial function if replaced with very-long chain n3 or n6 PUFAs.
Journal Article
Small terrestrial mammal distributions in Simien Mountains National Park, Ethiopia: a reassessment after 88 years
by
Stanley, William T.
,
Kerbis Peterhans, Julian C.
,
Meheretu, Yonas
in
climate change
,
data collection
,
elevational gradients
2020
Despite the presence of mostly endemic species, the most comprehensive data set on the distribution and ecology of small mammals inhabiting Simien Mountains National Park (SMNP) dated from 1927. The study we carried out and report here provides a unique opportunity to assess the possible role of climate change over the last 88 years on the elevational distribution of mammals in the Ethiopian highlands. Between September and November 2015, three of us (EWC, WTS, YM) collected nonvolant small mammals at four sites (2,900, 3,250, 3,600, and 4,000 m a.s.l.) along the western slope of the Simien Mountains using standardized sampling. Over a 4-week period we recorded 13 species, comprising 11 species of rodents and two of shrews, all endemic to the Ethiopian Plateau. We found the greatest species richness at mid-elevations (3,250 m), consistent with a general pattern found on many other mountains worldwide, but less so in Africa. We compared our species distribution results to the 1927 data set and found upward elevational shifts in species' ranges, highlighting the role and influence of climate change on the small mammal community. SMNP represents an exceptionally valuable core area of endemism and the best protected natural habitat in northern Ethiopia.
Journal Article
Differences in initial abundances reveal divergent dynamic structures in Gause's predator–prey experiments
by
Mühlbauer, Lina Kaya
,
Harpole, William Stanley
,
Clark, Adam Thomas
in
Biodiversity
,
chaos
,
Chaos theory
2022
Improved understanding of complex dynamics has revealed insights across many facets of ecology, and has enabled improved forecasts and management of future ecosystem states. However, an enduring challenge in forecasting complex dynamics remains the differentiation between complexity and stochasticity, that is, to determine whether declines in predictability are caused by stochasticity, nonlinearity, or chaos. Here, we show how to quantify the relative contributions of these factors to prediction error using Georgii Gause's iconic predator–prey microcosm experiments, which, critically, include experimental replicates that differ from one another only in initial abundances. We show that these differences in initial abundances interact with stochasticity, nonlinearity, and chaos in unique ways, allowing us to identify the impacts of these factors on prediction error. Our results suggest that jointly analyzing replicate time series across multiple, distinct starting points may be necessary for understanding and predicting the wide range of potential dynamic types in complex ecological systems. In this manuscript, we show that differences in the initial abundances in a two‐species predator–prey microcosm experiment leads to divergence in their underlying dynamics, which impedes precise forecasting across replicates. We then access the relative contributions of nonlinearity, chaos, and stochasticity to this decrease in predictability. To do this, we analyze time‐series data of two predator–prey systems, produced by Georgii F. Gause in 1936. In these experiments, replicates only differ in their initial abundances.
Journal Article
Pancreatic β-Cell Membrane Fluidity and Toxicity Induced by Human Islet Amyloid Polypeptide Species
by
Davis, Thomas P.
,
Ke, Pu Chun
,
Gurzov, Esteban N.
in
639/624/1107/328/1978
,
692/699/2743/137/773
,
Cell Line
2016
Aggregation of human islet amyloid polypeptide (hIAPP) into fibrils and plaques is associated with pancreatic β-cell loss in type 2 diabetes (T2D). However, due to the rapidness of hIAPP conversion in aqueous phase, exactly which hIAPP species is responsible for the observed toxicity and through what mechanisms remains ambiguous. In light of the importance of understanding hIAPP toxicity for T2D here we show a biophysical scheme based on the use of a lipophilic Laurdan dye for examining MIN6 cell membranes upon exposure to fresh and oligomeric hIAPP as well as mature amyloid. It has been found that all three hIAPP species, especially fresh hIAPP, enhanced membrane fluidity and caused losses in cell viability. The cell generation of reactive oxygen species (ROS), however, was the most pronounced with mature amyloid hIAPP. The correlation between changes in membrane fluidity and cell viability and their lack of correlation with ROS production suggest hIAPP toxicity is elicited through both physical and biochemical means. This study offers a new insight into β-cell toxicity induced by controlled hIAPP species, as well as new biophysical methodologies that may prove beneficial for the studies of T2D as well as neurological disorders.
Journal Article
Modeling Neural Adaptation in Auditory Cortex
by
Boatman-Reich, Dana
,
Beeman, David
,
Kudela, Pawel
in
Acoustic Stimulation - methods
,
Adaptation
,
Adaptation, Physiological - physiology
2018
Neural responses recorded from auditory cortex exhibit adaptation, a stimulus-specific decrease that occurs when the same sound is presented repeatedly. Stimulus-specific adaptation is thought to facilitate perception in noisy environments. Although adaptation is assumed to arise independently from cortex, this has been difficult to validate directly
. In this study, we used a neural network model of auditory cortex with multicompartmental cell modeling to investigate cortical adaptation. We found that repetitive, non-adapted inputs to layer IV neurons in the model elicited frequency-specific decreases in simulated single neuron, population-level and local field potential (LFP) activity, consistent with stimulus-specific cortical adaptation. Simulated recordings of LFPs, generated solely by excitatory post-synaptic inputs and recorded from layers II/III in the model, showed similar waveform morphologies and stimulus probability effects as auditory evoked responses recorded from human cortex. We tested two proposed mechanisms of cortical adaptation, neural fatigue and neural sharpening, by varying the strength and type of inter- and intra-layer synaptic connections (excitatory, inhibitory). Model simulations showed that synaptic depression modeled in excitatory (AMPA) synapses was sufficient to elicit a reduction in neural firing rate, consistent with neural fatigue. However, introduction of lateral inhibition from local layer II/III interneurons resulted in a reduction in the number of responding neurons, but not their firing rates, consistent with neural sharpening. These modeling results demonstrate that adaptation can arise from multiple neural mechanisms in auditory cortex.
Journal Article