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Tropical Applications of Meteorology Using Satellite Data and Ground-Based Observations (TAMSAT) rainfall monitoring products have been extended to provide spatially contiguous rainfall estimates across Africa. This has been achieved through a new, climatology-based calibration, which varies in both space and time. As a result, cumulative estimates of rainfall are now issued at the end of each 10-day period (dekad) at 4- km spatial resolution with pan-African coverage. The utility of the products for decision making is improved by the routine provision of validation reports, for which the 10-day (dekadal) TAMSAT rainfall estimates are compared with independent gauge observations. This paper describes the methodology by which the TAMSAT method has been applied to generate the pan-African rainfall monitoring products. It is demonstrated through comparison with gauge measurements that the method provides skillful estimates, although with a systematic dry bias. This study illustrates TAMSAT’s value as a complementary method of estimating rainfall through examples of successful operational application.

A new climate model, HadGEM3 N96ORCA1, is presented that is part of the GC3.1 configuration of HadGEM3. N96ORCA1 has a horizontal resolution of ~135 km in the atmosphere and 1° in the ocean and requires an order of magnitude less computing power than its medium‐resolution counterpart, N216ORCA025, while retaining a high degree of performance traceability. Scientific performance is compared to both observations and the N216ORCA025 model. N96ORCA1 reproduces observed climate mean and variability almost as well as N216ORCA025. Patterns of biases are similar across the two models. In the northwest Atlantic, N96ORCA1 shows a cold surface bias of up to 6 K, typical of ocean models of this resolution. The strength of the Atlantic meridional overturning circulation (16 to 17 Sv) matches observations. In the Southern Ocean, a warm surface bias (up to 2 K) is smaller than in N216ORCA025 and linked to improved ocean circulation. Model El Niño/Southern Oscillation and Atlantic Multidecadal Variability are close to observations. Both the cold bias in the Northern Hemisphere (N96ORCA1) and the warm bias in the Southern Hemisphere (N216ORCA025) develop in the first few decades of the simulations. As in many comparable climate models, simulated interhemispheric gradients of top‐of‐atmosphere radiation are larger than observations suggest, with contributions from both hemispheres. HadGEM3 GC3.1 N96ORCA1 constitutes the physical core of the UK Earth System Model (UKESM1) and will be used extensively in the Coupled Model Intercomparison Project 6 (CMIP6), both as part of the UK Earth System Model and as a stand‐alone coupled climate model. Plain Language Summary In this article, a new version of the climate model currently used in the United Kingdom (HadGEM3) is presented and analyzed. The circulation of the atmosphere and the oceans is simulated on a relatively coarse spatial grid with a grid cell size of about 120 km. The advantage of using a coarse spatial grid is that less computing power (on a supercomputer) is needed compared to using a finer grid. This gives an opportunity to do many more simulations of the ways in which Earth's climate may evolve in the decades and centuries ahead. We have carefully compared a simulation of the climate around the year 2000 with climate observations from that time and with a simulation from the same model with a finer spatial grid. Our results show that our new, coarse‐grid version is representing the current climate reasonably well, for instance, with regards to climate variability in the tropics and major ocean currents. However, there are clear differences between the two models. In the coarse‐grid model, the ocean surface is too cold in the northwest Atlantic, while in the fine‐grid version it is too warm in the Southern Ocean around Antarctica. We look into explanations for these inaccuracies. Key Points A low‐resolution, traceable version of the current Met Office Hadley Centre climate model HadGEM3 GC3.1 is presented The scientific performance is comparable to the medium‐resolution version, while requiring much less computational resources In the low‐resolution version the Southern Ocean warm bias is reduced, linked with a more realistic ocean circulation

Many Coupled Model Intercomparison Project phase 6 (CMIP6) models have exhibited a substantial cold bias in the global mean surface temperature (GMST) in the latter part of the 20th century. An overly strong negative aerosol forcing has been suggested as a leading contributor to this bias. An updated configuration of UK Earth System Model (UKESM) version 1, UKESM1.1, has been developed with the aim of reducing the historical cold bias in this model. Changes implemented include an improved representation of SO2 dry deposition, along with several other smaller modifications to the aerosol scheme and a retuning of some uncertain parameters of the fully coupled Earth system model. The Diagnostic, Evaluation and Characterization of Klima (DECK) experiments, a six-member historical ensemble and a subset of future scenario simulations are completed. In addition, the total anthropogenic effective radiative forcing (ERF), its components and the effective and transient climate sensitivities are also computed. The UKESM1.1 preindustrial climate is warmer than UKESM1 by up to 0.75 K, and a significant improvement in the historical GMST record is simulated, with the magnitude of the cold bias reduced by over 50 %. The warmer climate increases ocean heat uptake in the Northern Hemisphere oceans and reduces Arctic sea ice, which is in better agreement with observations. Changes to the aerosol and related cloud properties are a driver of the improved GMST simulation despite only a modest reduction in the magnitude of the negative aerosol ERF (which increases by +0.08 Wm-2). The total anthropogenic ERF increases from 1.76 Wm-2 in UKESM1 to 1.84 Wm-2 in UKESM1.1. The effective climate sensitivity (5.27 K) and transient climate response (2.64 K) remain largely unchanged from UKESM1 (5.36 and 2.76 K respectively).

The term “atmospheric river” is used to describe corridors of strong water vapor transport in the troposphere. Filaments of enhanced water vapor, commonly observed in satellite imagery extending from the subtropics to the extratropics, are routinely used as a proxy for identifying these regions of strong water vapor transport. The precipitation associated with these filaments of enhanced water vapor can lead to high-impact flooding events. However, there remains some debate as to how these filaments form. In this paper, the authors analyze the transport of water vapor within a climatology of wintertime North Atlantic extratropical cyclones. Results show that atmospheric rivers are formed by the cold front that sweeps up water vapor in the warm sector as it catches up with the warm front. This causes a narrow band of high water vapor content to form ahead of the cold front at the base of the warm conveyor belt airflow. Thus, water vapor in the cyclone’s warm sector, not long-distance transport of water vapor from the subtropics, is responsible for the generation of filaments of high water vapor content. A continuous cycle of evaporation and moisture convergence within the cyclone replenishes water vapor lost via precipitation. Thus, rather than representing a direct and continuous feed of moist air from the subtropics into the center of a cyclone (as suggested by the term “atmospheric river”), these filaments are, in fact, the result of water vapor exported from the cyclone, and thus they represent the footprints left behind as cyclones travel poleward from the subtropics.

Mineral dust plays an important role in Earth system models and is linked to many components, including atmospheric wind speed, precipitation and radiation, surface vegetation cover and soil properties and oceanic biogeochemical systems. In this paper, the dust scheme in the first configuration of the United Kingdom Earth System Model UKESM1 is described, and simulations of dust and its radiative effects are presented and compared with results from the parallel coupled atmosphere–ocean general circulation model (GCM) HadGEM3-GC3.1. Not only changes in the driving model fields but also changes in the dust size distribution are shown to lead to considerable differences to the present-day dust simulations and to projected future changes. UKESM1 simulations produce a present-day, top-of-the-atmosphere (ToA) dust direct radiative effect (DRE – defined as the change in downward net flux directly due to the presence of dust) of 0.086 W m−2 from a dust load of 19.5 Tg. Under climate change pathways these values decrease considerably. In the 2081–2100 mean of the Shared Socioeconomic Pathway SSP5–8.45 ToA DRE reaches 0.048 W m−2 from a load of 15.1 Tg. In contrast, in HadGEM3-GC3.1 the present-day values of −0.296 W m−2 and 15.0 Tg are almost unchanged at −0.289 W m−2 and 14.5 Tg in the 2081–2100 mean. The primary mechanism causing the differences in future dust projections is shown to be the vegetation response, which dominates over the direct effects of warming in our models. Though there are considerable uncertainties associated with any such estimates, the results presented demonstrate both the importance of the size distribution for dust modelling and also the necessity of including Earth system processes such as interactive vegetation in dust simulations for climate change studies.

We document the development of the first version of the U.K. Earth System Model UKESM1. The model represents a major advance on its predecessor HadGEM2‐ES, with enhancements to all component models and new feedback mechanisms. These include a new core physical model with a well‐resolved stratosphere; terrestrial biogeochemistry with coupled carbon and nitrogen cycles and enhanced land management; tropospheric‐stratospheric chemistry allowing the holistic simulation of radiative forcing from ozone, methane, and nitrous oxide; two‐moment, five‐species, modal aerosol; and ocean biogeochemistry with two‐way coupling to the carbon cycle and atmospheric aerosols. The complexity of coupling between the ocean, land, and atmosphere physical climate and biogeochemical cycles in UKESM1 is unprecedented for an Earth system model. We describe in detail the process by which the coupled model was developed and tuned to achieve acceptable performance in key physical and Earth system quantities and discuss the challenges involved in mitigating biases in a model with complex connections between its components. Overall, the model performs well, with a stable pre‐industrial state and good agreement with observations in the latter period of its historical simulations. However, global mean surface temperature exhibits stronger‐than‐observed cooling from 1950 to 1970, followed by rapid warming from 1980 to 2014. Metrics from idealized simulations show a high climate sensitivity relative to previous generations of models: Equilibrium climate sensitivity is 5.4 K, transient climate response ranges from 2.68 to 2.85 K, and transient climate response to cumulative emissions is 2.49 to 2.66 K TtC−1. Plain Language Summary We describe the development and behavior of UKESM1, a novel climate model that includes improved representations of processes in the atmosphere, ocean, and on land. These processes are inter‐related: For example, dust is produced on the land and blown up into the atmosphere where it affects the amount of sunlight falling on Earth. Dust can also be dissolved in the ocean, where it affects marine life. This in turn changes both the amount of carbon dioxide absorbed by the ocean and the material emitted from the surface into the atmosphere, which has an affect on the formation of clouds. UKESM1 includes many processes and interactions such as these, giving it a high level of complexity. Ensuring realistic process behavior is a major challenge in the development of our model, and we have carefully tested this. UKESM1 performs well, correctly exhibiting stable results from a continuous pre‐industrial simulation (used to provide a reference for future experiments) and showing good agreement with observations toward the end of its historical simulations. Results for some properties—including the degree to which average surface temperature changes with increased amounts of carbon dioxide in the atmosphere—are examined in detail. Key Points UKESM1 represents a major advance over its predecessor HadGEM2‐ES, both in the complexity of its components and its internal coupling The complex coupling presents challenges to the model development; we document the tuning process employed to obtain acceptable performance UKESM1 performs well, having a stable pre‐industrial state and showing good agreement with observations in a wide variety of contexts

Here we present a description of the UKCA StratTrop chemical mechanism, which is used in the UKESM1 Earth system model for CMIP6. The StratTrop chemical mechanism is a merger of previously well-evaluated tropospheric and stratospheric mechanisms, and we provide results from a series of bespoke integrations to assess the overall performance of the model.We find that the StratTrop scheme performs well when compared to a wide array of observations. The analysis we present here focuses on key components of atmospheric composition, namely the performance of the model to simulate ozone in the stratosphere and troposphere and constituents that are important for ozone in these regions. We find that the results obtained for tropospheric ozone and its budget terms from the use of the StratTrop mechanism are sensitive to the host model; simulations with the same chemical mechanism run in an earlier version of the MetUM host model show a range of sensitivity to emissions that the current model does not fall within.Whilst the general model performance is suitable for use in the UKESM1 CMIP6 integrations, we note some shortcomings in the scheme that future targeted studies will address.

We document and evaluate the aerosol schemes as implemented in the physical and Earth system models, the Global Coupled 3.1 configuration of the Hadley Centre Global Environment Model version 3 (HadGEM3-GC3.1) and the United Kingdom Earth System Model (UKESM1), which are contributing to the sixth Coupled Model Intercomparison Project (CMIP6). The simulation of aerosols in the present-day period of the historical ensemble of these models is evaluated against a range of observations. Updates to the aerosol microphysics scheme are documented as well as differences in the aerosol representation between the physical and Earth system configurations. The additional Earth system interactions included in UKESM1 lead to differences in the emissions of natural aerosol sources such as dimethyl sulfide, mineral dust and organic aerosol and subsequent evolution of these species in the model. UKESM1 also includes a stratospheric–tropospheric chemistry scheme which is fully coupled to the aerosol scheme, while GC3.1 employs a simplified aerosol chemistry mechanism driven by prescribed monthly climatologies of the relevant oxidants. Overall, the simulated speciated aerosol mass concentrations compare reasonably well with observations. Both models capture the negative trend in sulfate aerosol concentrations over Europe and the eastern United States of America (US) although the models tend to underestimate sulfate concentrations in both regions. Interactive emissions of biogenic volatile organic compounds in UKESM1 lead to an improved agreement of organic aerosol over the US. Simulated dust burdens are similar in both models despite a 2-fold difference in dust emissions. Aerosol optical depth is biased low in dust source and outflow regions but performs well in other regions compared to a number of satellite and ground-based retrievals of aerosol optical depth. Simulated aerosol number concentrations are generally within a factor of 2 of the observations, with both models tending to overestimate number concentrations over remote ocean regions, apart from at high latitudes, and underestimate over Northern Hemisphere continents. Finally, a new primary marine organic aerosol source is implemented in UKESM1 for the first time. The impact of this new aerosol source is evaluated. Over the pristine Southern Ocean, it is found to improve the seasonal cycle of organic aerosol mass and cloud droplet number concentrations relative to GC3.1 although underestimations in cloud droplet number concentrations remain. This paper provides a useful characterisation of the aerosol climatology in both models and will facilitate understanding in the numerous aerosol–climate interaction studies that will be conducted as part of CMIP6 and beyond.

Tropical Applications of Meteorology Using Satellite Data and Ground-Based Observations (TAMSAT) rainfall monitoring products have been extended to provide spatially contiguous rainfall estimates across Africa. This has been achieved through a new, climatology-based calibration, which varies in both space and time. As a result, cumulative estimates of rainfall are now issued at the end of each 10-day period (dekad) at 4-km spatial resolution with pan-African coverage. The utility of the products for decision making is improved by the routine provision of validation reports, for which the 10-day (dekadal) TAMSAT rainfall estimates are compared with independent gauge observations. This paper describes the methodology by which the TAMSAT method has been applied to generate the pan-African rainfall monitoring products. It is demonstrated through comparison with gauge measurements that the method provides skillful estimates, although with a systematic dry bias. This study illustrates TAMSAT’s value as a complementary method of estimating rainfall through examples of successful operational application.

Biomarker discovery and implementation are at the forefront of the precision medicine movement. Modern advances in the field of metabolomics afford the opportunity to readily identify new metabolite biomarkers across a wide array of disciplines. Many of the metabolites are derived from or directly reflective of mitochondrial metabolism. L-carnitine and acylcarnitines are established mitochondrial biomarkers used to screen neonates for a series of genetic disorders affecting fatty acid oxidation, known as the inborn errors of metabolism. However, L-carnitine and acylcarnitines are not routinely measured beyond this screening, despite the growing evidence that shows their clinical utility outside of these disorders. Measurements of the carnitine pool have been used to identify the disease and prognosticate mortality among disorders such as diabetes, sepsis, cancer, and heart failure, as well as identify subjects experiencing adverse drug reactions from various medications like valproic acid, clofazimine, zidovudine, cisplatin, propofol, and cyclosporine. The aim of this review is to collect and interpret the literature evidence supporting the clinical biomarker application of L-carnitine and acylcarnitines. Further study of these metabolites could ultimately provide mechanistic insights that guide therapeutic decisions and elucidate new pharmacologic targets.