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"Sutherland, Joan M"
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Burkholderia phymatum is a highly effective nitrogen-fixing symbiont of Mimosa spp. and fixes nitrogen ex planta
by
Perin, Liamara
,
The James Hutton Institute
,
Simon, Marcelo F
in
acetylene reduction
,
Bacterial Proteins - classification
,
Bacterial Proteins - genetics
2007
• The ability of Burkholderia phymatum STM815 to effectively nodulate Mimosa spp., and to fix nitrogen ex planta , was compared with that of the known Mimosa symbiont Cupriavidus taiwanensis LMG19424. • Both strains were equally effective symbionts of M. pudica , but nodules formed by STM815 had greater nitrogenase activity. STM815 was shown to have a broader host range across the genus Mimosa than LMG19424, nodulating 30 out of 31 species, 21 of these effectively. LMG19424 effectively nodulated only nine species. GFP-marked variants were used to visualise symbiont presence within nodules. • STM815 gave significant acetylene reduction assay (ARA) activity in semisolid JMV medium ex planta , but no ARA activity was detected with LMG19424. 16S rDNA sequences of two isolates originally from Mimosa nodules in Papua New Guinea (NGR114 and NGR195A) identified them as Burkholderia phymatum also, with nodA , nodC and nifH genes of NGR195A identical to those of STM815. • B. phymatum is therefore an effective Mimosa symbiont with a broad host range, and is the first reported beta-rhizobial strain to fix nitrogen in free-living culture.
Journal Article
Exploratory space-time analysis of dengue incidence in Trinidad: a retrospective study using travel hubs as dispersal points, 1998–2004
by
Curtin, Kevin M
,
Sutherland, Joan M
,
Agard, John B
in
Analysis
,
Biomedical and Life Sciences
,
Biomedicine
2014
BACKGROUND: Dengue is an acute arboviral disease responsible for most of the illness and death in tropical and subtropical regions. Over the last 25 years there has been increase epidemic activity of the disease in the Caribbean, with the co-circulation of multiple serotypes. An understanding of the space and time dynamics of dengue could provide health agencies with important clues for reducing its impact. METHODS: Dengue Haemorrhagic Fever (DHF) cases observed for the period 1998–2004 were georeferenced using Geographic Information System software. Spatial clustering was calculated for individual years and for the entire study period using the Nearest Neighbor Index. Space and time interaction between DHF cases was determined using the Knox Test while the Nearest Neighbor Hierarchical method was used to extract DHF hot spots. All space and time distances calculated were validated using the Pearson r significance test. RESULTS: Results shows that (1) a decrease in mean distance between DHF cases correlates with activity leading up to an outbreak, (2) a decrease in temporal distance between DHF cases leads to increased geographic spread of the disease, with an outbreak occurrence about every 2 years, and (3) a general pattern in the movement of dengue incidents from more rural to urban settings leading up to an outbreak with hotspot areas associated with transportation hubs in Trinidad. CONCLUSION: Considering only the spatial dimension of the disease, results suggest that DHF cases become more concentrated leading up to an outbreak. However, with the additional consideration of time, results suggest that when an outbreak occurs incidents occur more rapidly in time leading to a parallel increase in the rate of distribution of the disease across space. The results of this study can be used by public health officers to help visualize and understand the spatial and temporal patterns of dengue, and to prepare warnings for the public. Dengue space-time patterns and hotspot detection will provide useful information to support public health officers in their efforts to control and predict dengue spread over critical hotspots allowing better allocation of resources.
Journal Article
The Epidemiology of Fatal road traffic Collisions in Trinidad and Tobago, West Indies (2000-2011)
by
Rostant, Luke
,
Chadee, Dave D.
,
Singh-Gopaul, Aruna
in
Accident prevention
,
Accidents
,
Age groups
2016
Summary of what was known
* Few studies on road traffic collisions conducted in Latin American and the Caribbean region
* Increasing car ownership within the region
* Lack of seatbelt usage in Trinidad
* Most accidents are associated with alcohol usage
* High mortality among pedestrians
Summary of what this study adds
* Most collisions occur at night
* Most collisions occur at weekends
* Collisions are evenly distributed throughout the year
* More males than females die in fatal collisions
* The most productive age group (15-44) is affected the most
* More drivers than pedestrians are affected
* Reflects the pattern of developed rather than developing countries with respect to time of day for RTCs
The purpose of the study is to determine the epidemiology of road traffic collisions (RTCs) in Trinidad and Tobago by characterizing RTCs in terms of number of collisions, fatalities, victim profiles, and locations for the purpose of informing accident prevention programs. Previous studies of RTCs in Trinidad and Tobago were primarily concerned with patterns of drivers use of seat belts, road collisions as a cause of mortality in young men, and the economic burden of road collisions. Attempts were made to model road fatalities, but limited epidemiological data meant that it was difficult to determine trends or develop models.
This study determined the epidemiology of RTCs in Trinidad and Tobago over the period 2000-2011using data collected by the Trinidad and Tobago Road Traffic Branch of the Police Service and secondary data from the Central Statistical Office. Data were analyzed using Excel, SPSS, and R statistical packages.
Fatalities were greater among men (80%) than among women (20%) and were highest on two major freeways in Trinidad [the Churchill-Roosevelt Highway and the Sir Solomon Hochoy Highway]. Most collisions occurred during the night among individuals between the ages of 15 and 44 years. Fatalities among drivers steadily increased over the study period and overtook fatalities among pedestrians, who were the group most affected in 2000. Most fatalities occurred at weekends.
These patterns can inform (i) education programs and (ii) road and traffic control measures.
Journal Article
Aedes aegypti (L.) mosquitoes in Trinidad, West Indies: Longevity Case Studies
2017
Few laboratory and field studies have reported long survival periods for Ae. aegypti females and even fewer have designed experiments to characterize this important life history trait. This study was conducted under laboratory conditions to determine the number of blood meals taken by individual females, the number of eggs laid per individual female, the length of the gonotrophic cycle, and the duration of female survival. The results showed individual females oviposited between 670 and 1,500 eggs throughout their lifetimes, females undergoing large numbers of gonotrophic cycles and surviving up to 224 days. These results are discussed in the context of vector competence, unique alternating high and low oviposition patterns observed after week 14, and resource partitioning/allocation by older Ae. aegypti females after blood feeding.
Journal Article
Characterisation of rhizobia from African acacias and other tropical woody legumes using Biolog™ and partial 16S rRNA sequencing
by
Young, J. Peter W.
,
Haukka, Kaisa E.
,
Wang, Wen-Jun
in
African acacia
,
Biolog
,
Carbon sources
1999
Abstract
A Biolog™ (sole carbon source utilisation) user database of tropical and temperature rhizobial strains was created and used in conjunction with the partial 16S rRNA sequencing method to characterise 12 rhizobial isolates from African acacias and other tropical woody legumes. There was close agreement between the two methods but also some significant discrepancies. A high degree of diversity was shown in the relatively small sample of isolates, with 4 out of 5 of the currently proposed rhizobial genera represented. This is the first time Biolog has shown congruence with genotypic fingerprinting using a wide selection of rhizobial reference and test strains.
Journal Article
Characterisation of rhizobia from African acacias and other tropical woody legumes using Biolog™ and partial 16S rRNA sequencing
1999
A Biolog™ (sole carbon source utilisation) user database of tropical and temperature rhizobial strains was created and used in conjunction with the partial 16S rRNA sequencing method to characterise 12 rhizobial isolates from African acacias and other tropical woody legumes. There was close agreement between the two methods but also some significant discrepancies. A high degree of diversity was shown in the relatively small sample of isolates, with 4 out of 5 of the currently proposed rhizobial genera represented. This is the first time Biolog has shown congruence with genotypic fingerprinting using a wide selection of rhizobial reference and test strains.
Journal Article
The Epidemiology of Fatal road traffic Collisions in Trinidad and Tobago, West Indies (2000-2011)
2016
of what was known • Few studies on road traffic collisions conducted in Latin American and the Caribbean region • Increasing car ownership within the region • Lack of seatbelt usage in Trinidad • Most accidents are associated with alcohol usage • High mortality among pedestrians Summary of what this study adds • Most collisions occur at night • Most collisions occur at weekends • Collisions are evenly distributed throughout the year • More males than females die in fatal collisions • The most productive age group (15-44) is affected the most • More drivers than pedestrians are affected • Reflects the pattern of developed rather than developing countries with respect to time of day for RTCs Background The purpose of the study is to determine the epidemiology of road traffic collisions (RTCs) in Trinidad and Tobago by characterizing RTCs in terms of number of collisions, fatalities, victim profiles, and locations for the purpose of informing accident prevention programs. Previous studies of RTCs in Trinidad and Tobago were primarily concerned with patterns of drivers use of seat belts, road collisions as a cause of mortality in young men, and the economic burden of road collisions. Attempts were made to model road fatalities, but limited epidemiological data meant that it was difficult to determine trends or develop models. Methods This study determined the epidemiology of RTCs in Trinidad and Tobago over the period 2000-2011using data collected by the Trinidad and Tobago Road Traffic Branch of the Police Service and secondary data from the Central Statistical Office. Data were analyzed using Excel, SPSS, and R statistical packages. Results Fatalities were greater among men (80%) than among women (20%) and were highest on two major freeways in Trinidad [the Churchill-Roosevelt Highway and the Sir Solomon Hochoy Highway]. Most collisions occurred during the night among individuals between the ages of 15 and 44 years. Fatalities among drivers steadily increased over the study period and overtook fatalities among pedestrians, who were the group most affected in 2000. Most fatalities occurred at weekends. Conclusions These patterns can inform (i) education programs and (ii) road and traffic control measures.
Journal Article
Cluster root development in Grevillea robusta (Proteaceae). II. The development of the endodermis in a determinate root and in an indeterminate, lateral root
by
SUTHERLAND, JOAN M.
,
SPRENT, JANET I.
,
SKENE, KEITH R.
in
Agronomy. Soil science and plant productions
,
Biological and medical sciences
,
cell division
1998
Light, fluorescence and electron microscopy were employed to follow
the development of the endodermis in
cluster roots and lateral roots of Grevillea robusta A. Cunn.
ex
R. Br. Endodermal cells had three different origins:
rootlet endodermis arose from the rootlet meristem; endodermis covering
the primordium shortly after initiation
came from division of parental endodermis; cells at the junction between
parent and rootlet endodermis developed
from re-differentiated rootlet cortical cells. In the cluster root,
the Casparian band formed in three ways, and was
not initially present opposite the two sets of single xylem elements in
the rootlet stele. A new clearing technique
was developed that allowed visualization of xylem, suberized endodermis,
Casparian band formation and phenolic
compounds. In lateral roots, endodermal differentiation was asynchronous,
but was related to position relative to
protoxylem poles. However, the observed delay began before these poles
had differentiated. At the tip of mature
rootlets, which are determinate, the endodermis terminates in a
‘dome’ of cells, with the initial cell differentiating
as an endodermal cell. Results are discussed in terms of determinate
development in roots and the spatial and
temporal contexts within which this development takes place.
Journal Article