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"Swan, James W."
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Scientific machine learning for modeling and simulating complex fluids
by
McKinley, Gareth H.
,
Swan, James W.
,
Lennon, Kyle R.
in
Computational fluid dynamics
,
Constitutive equations
,
Constitutive relationships
2023
The formulation of rheological constitutive equations—models that relate internal stresses and deformations in complex fluids—is a critical step in the engineering of systems involving soft materials. While data-driven models provide accessible alternatives to expensive first-principles models and less accurate empirical models in many engineering disciplines, the development of similar models for complex fluids has lagged. The diversity of techniques for characterizing non-Newtonian fluid dynamics creates a challenge for classical machine learning approaches, which require uniformly structured training data. Consequently, early machine-learning based constitutive equations have not been portable between different deformation protocols or mechanical observables. Here, we present a data-driven framework that resolves such issues, allowing rheologists to construct learnable models that incorporate essential physical information, while remaining agnostic to details regarding particular experimental protocols or flow kinematics. These scientific machine learning models incorporate a universal approximator within a materially objective tensorial constitutive framework. By construction, these models respect physical constraints, such as frame-invariance and tensor symmetry, required by continuum mechanics. We demonstrate that this framework facilitates the rapid discovery of accurate constitutive equations from limited data and that the learned models may be used to describe more kinematically complex flows. This inherent flexibility admits the application of these “digital fluid twins” to a range of material systems and engineering problems. We illustrate this flexibility by deploying a trained model within a multidimensional computational fluid dynamics simulation—a task that is not achievable using any previously developed data-driven rheological equation of state.
Journal Article
Colloidal gel elasticity arises from the packing of locally glassy clusters
by
Whitaker, Kathryn A.
,
Furst, Eric M.
,
Swan, James W.
in
639/301/923/1029
,
639/301/923/916
,
Agricultural biotechnology
2019
Colloidal gels formed by arrested phase separation are found widely in agriculture, biotechnology, and advanced manufacturing; yet, the emergence of elasticity and the nature of the arrested state in these abundant materials remains unresolved. Here, the quantitative agreement between integrated experimental, computational, and graph theoretic approaches are used to understand the arrested state and the origins of the gel elastic response. The micro-structural source of elasticity is identified by the
l
-balanced graph partition of the gels into minimally interconnected clusters that act as rigid, load bearing units. The number density of cluster-cluster connections grows with increasing attraction, and explains the emergence of elasticity in the network through the classic Cauchy-Born theory. Clusters are amorphous and iso-static. The internal cluster concentration maps onto the known attractive glass line of sticky colloids at low attraction strengths and extends it to higher strengths and lower particle volume fractions.
Colloidal gels are typically composed of solid particles dispersed in a liquid, which show some peculiar mechanic properties but their origins remain largely unsolved. Here, Whitaker et al. show that the elasticity formed via arrested phase separation arises from the packing of glassy clusters in gels.
Journal Article
Hydrodynamics control shear-induced pattern formation in attractive suspensions
by
Swan, James W.
,
Dolique, Vincent
,
Pecorario, Stefano
in
Computational fluid dynamics
,
Computer simulation
,
Condensed Matter
2019
Dilute suspensions of repulsive particles exhibit a Newtonian response to flow that can be accurately predicted by the particle volume fraction and the viscosity of the suspending fluid. However, such a description fails when the particles are weakly attractive. In a simple shear flow, suspensions of attractive particles exhibit complex, anisotropic microstructures and flow instabilities that are poorly understood and plague industrial processes. One such phenomenon, the formation of log-rolling flocs, which is ubiquitously observed in suspensions of attractive particles that are sheared while confined between parallel plates, is an exemplar of this phenomenology. Combining experiments and discrete element simulations, we demonstrate that this shear-induced structuring is driven by hydrodynamic coupling between the flocs and the confining boundaries. Clusters of particles trigger the formation of viscous eddies that are spaced periodically and whose centers act as stable regions where particles aggregate to form flocs spanning the vorticity direction. Simulation results for the wavelength of the periodic pattern of stripes formed by the logs and for the log diameter are in quantitative agreement with experimental observations on both colloidal and noncolloidal suspensions. Numerical and experimental results are successfully combined by means of rescaling in terms of a Mason number that describes the strength of the shear flow relative to the rupture force between contacting particles in the flocs. The introduction of this dimensionless group leads to a universal stability diagram for the log-rolling structures and allows for application of shear-induced structuring as a tool for assembling and patterning suspensions of attractive particles.
Journal Article
A data-driven method for automated data superposition with applications in soft matter science
by
McKinley, Gareth H.
,
Swan, James W.
,
Lennon, Kyle R.
in
Algorithms
,
Automation
,
Bayesian statistics
2023
The superposition of data sets with internal parametric self-similarity is a longstanding and widespread technique for the analysis of many types of experimental data across the physical sciences. Typically, this superposition is performed manually, or recently through the application of one of a few automated algorithms. However, these methods are often heuristic in nature, are prone to user bias via manual data shifting or parameterization, and lack a native framework for handling uncertainty in both the data and the resulting model of the superposed data. In this work, we develop a data-driven, nonparametric method for superposing experimental data with arbitrary coordinate transformations, which employs Gaussian process regression to learn statistical models that describe the data, and then uses maximum a posteriori estimation to optimally superpose the data sets. This statistical framework is robust to experimental noise and automatically produces uncertainty estimates for the learned coordinate transformations. Moreover, it is distinguished from black-box machine learning in its interpretability—specifically, it produces a model that may itself be interrogated to gain insight into the system under study. We demonstrate these salient features of our method through its application to four representative data sets characterizing the mechanics of soft materials. In every case, our method replicates results obtained using other approaches, but with reduced bias and the addition of uncertainty estimates. This method enables a standardized, statistical treatment of self-similar data across many fields, producing interpretable data-driven models that may inform applications such as materials classification, design, and discovery.
Journal Article
How Confinement-Induced Structures Alter the Contribution of Hydrodynamic and Short-Ranged Repulsion Forces to the Viscosity of Colloidal Suspensions
2017
Confined systems ranging from the atomic to the granular are ubiquitous in nature. Experiments and simulations of such atomic and granular systems have shown a complex relationship between the microstructural arrangements under confinement, the short-ranged particle stresses, and flow fields. Understanding the same correlation between structure and rheology in the colloidal regime is important due to the significance of such suspensions in industrial applications. Moreover, colloidal suspensions exhibit a wide range of structures under confinement that could considerably modify such force balances and the resulting viscosity. Here, we use a combination of experiments and simulations to elucidate how confinement-induced structures alter the relative contributions of hydrodynamic and short-range repulsive forces to produce up to a tenfold change in the viscosity. In the experiments we use a custom-built confocal rheoscope to image the particle configurations of a colloidal suspension while simultaneously measuring its stress response. We find that as the gap decreases below 15 particle diameters, the viscosity first decreases from its bulk value, shows fluctuations with the gap, and then sharply increases for gaps below 3 particle diameters. These trends in the viscosity are shown to strongly correlate with the suspension microstructure. Further, we compare our experimental results to those from two different simulations techniques, which enables us to determine the relative contributions of hydrodynamic and short-range repulsive stresses to the suspension rheology. The first method uses the lubrication approximation to find the hydrodynamic stress and includes a short-range repulsive force between the particles while the second is a Stokesian dynamics simulation that calculates the full hydrodynamic stress in the suspension. We find that the decrease in the viscosity at moderate confinements has a significant contribution from both the hydrodynamic and short-range repulsive forces whereas the increase in viscosities at gaps less than 3 particle diameters arises primarily from short-range repulsive forces. These results provide important insights into the rheological behavior of confined suspensions and further enable us to tune the viscosity of confined suspensions by changing properties such as the gap, polydispersity, and the volume fraction.
Journal Article
Fast Stokesian dynamics
2019
We present a new method for large scale dynamic simulation of colloidal particles with hydrodynamic interactions and Brownian forces, which we call fast Stokesian dynamics (FSD). The approach for modelling the hydrodynamic interactions between particles is based on the Stokesian dynamics (SD) algorithm ( J. Fluid Mech. , vol. 448, 2001, pp. 115–146), which decomposes the interactions into near-field (short-ranged, pairwise additive and diverging) and far-field (long-ranged many-body) contributions. In FSD, the standard system of linear equations for SD is reformulated using a single saddle point matrix. We show that this reformulation is generalizable to a host of particular simulation methods enabling the self-consistent inclusion of a wide range of constraints, geometries and physics in the SD simulation scheme. Importantly for fast, large scale simulations, we show that the saddle point equation is solved very efficiently by iterative methods for which novel preconditioners are derived. In contrast to existing approaches to accelerating SD algorithms, the FSD algorithm avoids explicit inversion of ill-conditioned hydrodynamic operators without adequate preconditioning, which drastically reduces computation time. Furthermore, the FSD formulation is combined with advanced sampling techniques in order to rapidly generate the stochastic forces required for Brownian motion. Specifically, we adopt the standard approach of decomposing the stochastic forces into near-field and far-field parts. The near-field Brownian force is readily computed using an iterative Krylov subspace method, for which a novel preconditioner is developed, while the far-field Brownian force is efficiently computed by linearly transforming those forces into a fluctuating velocity field, computed easily using the positively split Ewald approach ( J. Chem. Phys. , vol. 146, 2017, 124116). The resultant effect of this field on the particle motion is determined through solution of a system of linear equations using the same saddle point matrix used for deterministic calculations. Thus, this calculation is also very efficient. Additionally, application of the saddle point formulation to develop high-resolution hydrodynamic models from constrained collections of particles (similar to the immersed boundary method) is demonstrated and the convergence of such models is discussed in detail. Finally, an optimized graphics processing unit implementation of FSD for mono-disperse spherical particles is used to demonstrated performance and accuracy of dynamic simulations of$O(10^{5})$particles, and an open source plugin for the HOOMD-blue suite of molecular dynamics software is included in the supplementary material.
Journal Article
Multi-scale kinetics of a field-directed colloidal phase transition
by
Bunnell, Charles T
,
Furst, Eric M
,
Hall, Nancy R
in
Chemical suspensions
,
Colloids
,
Colloids - chemistry
2012
Polarizable colloids are expected to form crystalline equilibrium phases when exposed to a steady, uniform field. However, when colloids become localized this field-induced phase transition arrests and the suspension persists indefinitely as a kinetically trapped, percolated structure. We anneal such gels formed from magneto-rheological fluids by toggling the field strength at varied frequencies. This processing allows the arrested structure to relax periodically to equilibrium—colloid-rich, cylindrical columns. Two distinct growth regimes are observed: one in which particle domains ripen through diffusive relaxation of the gel, and the other where the system-spanning structure collapses and columnar domains coalesce apparently through field-driven interactions. There is a stark boundary as a function of magnetic field strength and toggle frequency distinguishing the two regimes. These results demonstrate how kinetic barriers to a colloidal phase transition are subverted through measured, periodic variation of driving forces. Such directed assembly may be harnessed to create unique materials from dispersions of colloids.
Journal Article
Modelling a hydrodynamic instability in freely settling colloidal gels
by
Varga, Zsigmond
,
Swan, James W.
,
Hofmann, Jennifer L.
in
Brownian motion
,
Catastrophic collapse
,
Catastrophic events
2018
Attractive colloidal dispersions, suspensions of fine particles which aggregate and frequently form a space-spanning elastic gel are ubiquitous materials in society with a wide range of applications. The colloidal networks in these materials can exist in a mode of free settling when the network weight exceeds its compressive yield stress. An equivalent state occurs when the network is held fixed in place and used as a filter through which the suspending fluid is pumped. In either scenario, hydrodynamic instabilities leading to loss of network integrity occur. Experimental observations have shown that the loss of integrity is associated with the formation of eroded channels, so-called streamers, through which the fluid flows rapidly. However, the dynamics of growth and subsequent mechanism of collapse remain poorly understood. Here, a phenomenological model is presented that describes dynamically the radial growth of a streamer due to erosion of the network by rapid fluid back flow. The model exhibits a finite-time blowup – the onset of catastrophic failure in the gel – due to activated breaking of the inter-colloid bonds. Brownian dynamics simulations of hydrodynamically interacting and settling colloids in dilute gels are employed to examine the initiation and propagation of this instability, which are in good agreement with the theory. The model dynamics is also shown to accurately replicate measurements of streamer growth in two different experimental systems. The predictive capabilities and future improvements of the model are discussed and a stability-state diagram is presented providing insight into engineering strategies for avoiding settling instabilities in networks meant to have long shelf lives.
Journal Article
Quantifying the hydrodynamic contribution to electrical transport in non-Brownian suspensions
by
Lin, Han
,
Majji, Madhu V.
,
Swan, James W.
in
Applied Physical Sciences
,
charge carrier diffusion
,
Diffusion rate
2022
Electrical transport in semiconducting and metallic particle suspensions is an enabling feature of emerging grid-scale battery technologies. Although the physics of the transport process plays a key role in these technologies, no universal framework has yet emerged. Here, we examine the important contribution of shear flow to the electrical transport of non-Brownian suspensions. We find that these suspensions exhibit a strong dependence of the transport rate on the particle volume fraction and applied shear rate, which enables the conductivity to be dynamically changed by over 10⁷ decades based on the applied shear rate. We combine experiments and simulations to conclude that the transport process relies on a combination of charge and particle diffusion with a rate that can be predicted using a quantitative physical model that incorporates the self-diffusion of the particles.
Journal Article
Medium amplitude parallel superposition (MAPS) rheology of a wormlike micellar solution
by
McKinley, Gareth H.
,
Swan, James W.
,
Lennon, Kyle R.
in
Amplitudes
,
Chain entanglement
,
Characterization and Evaluation of Materials
2021
The weakly nonlinear rheology of a surfactant solution of wormlike micelles is investigated from both a modeling and experimental perspective using the framework of medium amplitude parallel superposition (MAPS) rheology. MAPS rheology defines material functions, such as the third-order complex compliance, which span the entire weakly nonlinear response space of viscoelastic materials to simple shear deformations. Three-tone oscillatory shear deformations are applied to obtain feature-rich data characterizing the third-order complex compliance with high data throughput. Here, data for a CPyCl solution are compared to the analytical solution for the MAPS response of a reptation-reaction constitutive model, which treats micelles as linear polymers that can break apart and recombine in solution. Regression of the data to the model predictions provides new insight into how these breakage and recombination processes are affected by shear, and demonstrates the importance of using information-rich data to infer precise estimates of model parameters.
Graphical abstract
Journal Article