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result(s) for
"Tang, Deping"
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Transcriptome Analysis Reveals the Mechanism of Y0-C10-HSL on Biofilm Formation and Motility of Pseudomonas aeruginosa
2024
Background: Pseudomonas aeruginosa (P. aeruginosa) is a type of pathogen that takes advantage of opportunities to infect and form biofilm during infection. Inhibiting biofilm formation is a promising approach for the treatment of biofilm-related infections. Methods: Here, Y0-C10-HSL (N-cyclopentyl-n-decanamide) was designed, synthesized, and tested for its effect on biofilm formation, motility, and the Caenorhabditis elegans (C. elegans) survival assay. In addition, the molecular mechanism of Y0-C10-HSL on P. aeruginosa biofilm formation was explored using transcriptome analysis. Results: At a concentration of 200 μmol/L Y0-C10-HSL, biofilm and exopolysaccharides were decreased by 38.5% and 29.3%, respectively; Y0-C10-HSL effectively dispersed the pre-formed biofilm and inhibited the motility ability of P. aeruginosa; and the C. elegans survival assay showed that Y0-C10-HSL was safe and provided protection to C. elegans against P. aeruginosa infection (the survival rates of C. elegans were higher than 74% and increased by 39%, 35.1%, and 47.5%, respectively, when treated with 200 μmol/L Y0-C10-HSL at 24, 48, and 80 h). Transcriptome analysis showed that 585 differentially expressed genes (DEGs) were found after treatment with 200 μmol/L Y0-C10-HSL, including 254 up-regulated DEGs and 331 down-regulated DEGs. The genes involved in the quorum sensing system and biofilm formation were down-regulated. Conclusions: Y0-C10-HSL inhibited the biofilm formation and dispersed the pre-formed biofilm of P. aeruginosa through down-regulated genes related to quorum sensing pathways and biofilm formation. These findings provide a theoretical foundation for the treatment and prevention of antibiotic resistance in clinical and environmental microorganisms such as P. aeruginosa.
Journal Article
Diallyl Disulfide Attenuates Ionizing Radiation-Induced Migration and Invasion by Suppressing Nrf2 Signaling in Non–small-Cell Lung Cancer
2021
Non–small-cell lung cancer (NSCLC) is the leading cause of cancer-associated deaths. Radiotherapy remains the primary treatment method for NSCLC. Despite great advances in radiotherapy techniques and modalities, recurrence and resistance still limit therapeutic success, even low-dose ionizing radiation (IR) can induce the migration and invasion. Diallyl disulfide (DADS), a bioactive component extracted from garlic, exhibits a wide spectrum of biological activities including antitumor effects. However, the effect of DADS on IR-induced migration and invasion remains unclear. The present study reported that IR significantly promoted the migration and invasion of A549 cells. Pretreatment with 40 μM DADS enhanced the radiosensitivity of A549 cells and attenuated IR-induced migration and invasion. In addition, 40 μM DADS inhibited migration-related protein matrix metalloproteinase-2 and 9 (MMP-2/9) expression and suppressed IR-aggravated EMT by the upregulation of the epithelial marker, E-cadherin, and downregulation of the mesenchymal marker, N-cadherin, in A549 cells. Furthermore, DADS was found to inhibit the activation of Nrf2 signaling. Based on our previous results that knockdown of Nrf2 by siRNA suppressed IR-induced migration and invasion in A549 cells, we speculated that DADS attenuated IR-induced migration and invasion by suppressing the activation of Nrf2 signaling in A549 cells.
Journal Article
Sintering Characteristics and Microwave Dielectric Properties of BaTi4O9 Ceramics with CuO–TiO2 Addition
2023
Sintering characteristics, phase evolutions, microstructures, and microwave dielectric properties have been investigated for BaTi4O9 ceramics prepared by traditional low temperature sintering using CuO–TiO2 (CT) additions as aids. The sintering temperature of BaTi4O9 ceramics was found to evidently reduce from 1350 °C to about 1100 °C with a very small amount of 0.5 wt% CT addition. When the CT addition increased to beyond 0.5 wt%, however, it was not expected to further lower the sintering temperature. Meantime, the secondary phases of Ba4Ti13O30, BaTiO3, and TiO2 were observed in these BaTi4O9-based ceramics when the CT content was beyond 2 wt%. With the introduction of the CT addition, the permittivity (ε) had little enhancement, and the temperature coefficient of the resonant frequency (τf) was improved to near zero. The BaTi4O9 ceramics with 0.5 wt% CT additions, sintered at 1100 °C, exhibited excellent microwave dielectric properties, such as ε = 36.9, Q × f = 23100 GHz, and τf = 2.5 ppm/°C. In addition, the densification mechanism and variations of the microwave dielectric properties have also been discussed with the crystal phase and microstructure’s evolution.
Journal Article
Effect of L-HSL on biofilm and motility of Pseudomonas aeruginosa and its mechanism
by
Lin, Yanyan
,
Liu, Yali
,
Li, Mengjiao
in
4-Butyrolactone - analogs & derivatives
,
4-Butyrolactone - metabolism
,
4-Butyrolactone - pharmacology
2024
Pseudomonas aeruginosa
(
P. aeruginosa
) biofilm formation is a crucial cause of enhanced antibiotic resistance. Quorum sensing (QS) is involved in regulating biofilm formation; QS inhibitors block the QS signaling pathway as a new strategy to address bacterial resistance. This study investigated the potential and mechanism of L-HSL (N-(3-cyclic butyrolactone)-4-trifluorophenylacetamide) as a QS inhibitor for
P. aeruginosa
. The results showed that L-HSL effectively inhibited the biofilm formation and dispersed the pre-formed biofilm of
P. aeruginosa
. The production of extracellular polysaccharides and the motility ability of
P. aeruginosa
were suppressed by L-HSL.
C. elegans
infection experiment showed that L-HSL was non-toxic and provided protection to
C. elegans
against
P. aeruginosa
infection. Transcriptomic analysis revealed that L-HSL downregulated genes related to QS pathways and biofilm formation. L-HSL exhibits a promising potential as a therapeutic drug for
P. aeruginosa
infection.
Key points
• Chemical synthesis of N-(3-cyclic butyrolactone)-4-trifluorophenylacetamide, named L-HSL.
• L-HSL does not generate survival pressure on the growth of P. aeruginosa and can inhibit the QS system.
• KEGG enrichment analysis found that after L-HSL treatment, QS-related genes were downregulated.
Journal Article
Bio-adsorption and Bio-transformation of Arsenic by Acidithiobacillus ferrooxidans BY3
by
Gao, Qiyu
,
Song, Peng
,
Li, Hongyu
in
Acid mine drainage
,
Acid mine water
,
Acidithiobacillus - metabolism
2018
Arsenic, a toxic element in the environment, has seriously threatened the health of hundreds of millions of people in the world. Meanwhile, microorganisms play an important role in the adsorption and bio-transformation of arsenic. Here, we compared the biological characteristics of
Acidithiobacillus ferrooxidans
BY3 in different media systems, such as arsenic bio-adsorption and bio-transformation capacities. We show that arsenic stress significantly affected the pH and Eh of the culture systems, as well as the oxidation rates of Fe
2+
and bacteria numbers. Furthermore, arsenic influenced bacterial structure and composition of the cell membrane, caused volume decreased and changed the vibration conditions of characteristic peaks of surface groups (-CH
2
, -NH, and –OH) on cell membranes. In addition,
At.f-
BY3 shows high bio-adsorption abilities and certain bio-transformation abilities for iAs
III
. Bio-adsorption and conversion efficiency was also shown to be significantly affected by Fe
2+
concentrations in the reaction systems. Statistic analysis revealed 10.07-fold increase of the transformation ability of iAs
III
into iAs
V
in the 9 K growth media containing 1600 mg/L NaAsO
2
compared with that in the 1 K growth media. Our findings contribute to understand the applications and microbiological mechanisms of
Acidithiobacillus ferrooxidans
in arsenic pollution.
Graphical Abstract
Bio-adsorption and bio-transformation are used as a biological method of heavy metals pollution, such as Cu
2+
, Ni
2+
, Pb
2+
, Cr
2+
, Zn
2+
, Cd
2+
, As
3+
and As
5+
in acid mine water. The aim of this investigation was to assess the performance of arsenite (iAsIII) to adsorption and transformation by
Acidithiobacillus ferrooxidans
BY3, and application of
Acidithiobacillus ferrooxidans
BY3 on the aspect of arsenic pollution has great potential of exploration.
Journal Article
Sintering Characteristics and Microwave Dielectric Properties of BaTisub.4Osub.9 Ceramics with CuO–TiOsub.2 Addition
2023
Sintering characteristics, phase evolutions, microstructures, and microwave dielectric properties have been investigated for BaTi[sub.4]O[sub.9] ceramics prepared by traditional low temperature sintering using CuO–TiO[sub.2] (CT) additions as aids. The sintering temperature of BaTi[sub.4]O[sub.9] ceramics was found to evidently reduce from 1350 °C to about 1100 °C with a very small amount of 0.5 wt% CT addition. When the CT addition increased to beyond 0.5 wt%, however, it was not expected to further lower the sintering temperature. Meantime, the secondary phases of Ba[sub.4]Ti[sub.13]O[sub.30], BaTiO[sub.3], and TiO[sub.2] were observed in these BaTi[sub.4]O[sub.9]-based ceramics when the CT content was beyond 2 wt%. With the introduction of the CT addition, the permittivity (ε) had little enhancement, and the temperature coefficient of the resonant frequency (τ[sub.f]) was improved to near zero. The BaTi[sub.4]O[sub.9] ceramics with 0.5 wt% CT additions, sintered at 1100 °C, exhibited excellent microwave dielectric properties, such as ε = 36.9, Q × f = 23100 GHz, and τ[sub.f] = 2.5 ppm/°C. In addition, the densification mechanism and variations of the microwave dielectric properties have also been discussed with the crystal phase and microstructure’s evolution.
Journal Article
MicroRNA-29b-3p enhances radiosensitivity through modulating WISP1-mediated mitochondrial apoptosis in prostate cancer cells
2020
Radiotherapy is frequently applied for clinically localized prostate cancer while its efficacy could be significantly hindered by radioresistance. MicroRNAs (miRNAs) are important regulators in mediating cellular responses to ionizing radiation (IR), and strongly associate with radiosensitivity in many cancers. In this study, enhancement of radiosensitivity by miR-29b-3p was demonstrated in prostate cancer cell line LNCaP in vitro. Results showed that miR-29b-3p expression was significantly upregulated in response to IR from both X-rays and carbon ion irradiations. Knockdown of miR-29b-3p resulted in radioresistance while overexpression of miR-29b-3p led to increased radiosensitivity (showing reduced cell viability, suppressed cell proliferation and decreased colony formation). In addition, miR-29b-3p was found to directly target Wnt1-inducible-signaling protein 1 (WISP1). Inhibition of WISP1 facilitated the mitochondrial apoptosis pathway through suppressing Bcl-XL expression while activating caspase-3 and poly (ADP-ribose) polymerase (PARP). The results indicated that miR-29b-3p was a radiosensitizing miRNAs and could enhance radiosensitivity of LNCaP cells by targeting WISP1. These findings suggested a novel treatment to overcome radioresistance in prostate cancer patients, especially those with higher levels of the WISP1 expression.
Journal Article
Mg2+ reduces biofilm quantity in Acidithiobacillus ferrooxidans through inhibiting Type IV pili formation
by
Gao, Qiyu
,
Xu, Ruixiang
,
Xu, Yuandong
in
Acidithiobacillus ferrooxidans
,
Attachment
,
bacteria
2018
Abstract
Bioleaching is a promising process for 350 million tons of Jinchuan low-grade pentlandite. But high concentration of Mg2+ is harmful to bioleaching microorganisms. Interestingly, biofilm formation can improve leaching rate. Thus, it is actually necessary to investigate the effect of Mg2+ stress on Acidithiobacillus ferrooxidans biofilms formation. In this study, we found that 0.1 and 0.5 M Mg2+ stress significantly reduced the total biomass of biofilm in a dose-dependent manner. The observation results of extracellular polymeric substances and bacteria using confocal laser scanning microscopy showed that the biofilm became thinner and looser under Mg2+ stress. Whereas 0.1 and 0.5 M Mg2+ stress had no remarkable effect on the bacterial viability, the attachment rate of Acidithiobacillus ferrooxidans to pentlandite was reduced by Mg2+ stress. Furthermore, sliding motility, twitching motility and the gene expression level of pilV and pilW were inhibited under Mg2+ stress. These results suggested that Mg2+ reduced biofilm formation through inhibiting pilV and pilW gene expression, decreasing Type IV pili formation and then attenuating the ability of attachment, subduing the active expansion of biofilms mediated by twitching motility. This study provided more information about the effect of Mg2+ stress on biofilm formation and may be useful for increasing the leaching rate in low-grade pentlandit.
Mg2+ stress reduced biofilm formation by inhibiting pilV, pilW gene expression, attenuating the ability of attachment, subduing the active expansion of biofilms mediated by twitching motility.
Journal Article
Strand-specific RNA-seq analysis of the Acidithiobacillus ferrooxidans transcriptome in response to magnesium stress
2018
Bioleaching is a promising process for 350 million tons Jinchuan low-grade pentlandite. But, Jinchuan pentlandite has lots of magnesium and high concentration of Mg2+ is harmful to bioleaching microorganisms. Thus, finding a way to improve the adaption of microorganisms to Mg2+ is a key for bioleaching. In the study, we found that oxidizing activity, bioleaching ability and biofilm formation of A.f were inhibited by Mg2+ stress. In addition, we analyzed mRNA and small RNA (sRNA) of Acidithiobacillus ferrooxidans (A.f) under Mg2+ stress by strand-specific RNA-sequencing (ssRNA-seq). After the bioinformatics process, 2475 coding genes were obtained, and there were 33 differential expression genes (DEGs) in 0.1 M-VS-Con, including 28 down-regulated and 5 up-regulated, whereas 52 DEGs were obtained in 0.5 M-VS-Con, including 28 down-regulated and 24 up-regulated. Gene ontology analysis showed most of DEGs were involved in catalytic activity, metabolic process and single-organism process. Furthermore, we identified 636 sRNA and some differential expression sRNA that may respond to Mg2+ stress. Further analysis of DEGs suggested that Mg2+ stress reduced biofilm formation perhaps through inhibiting Type IV Pili-related gene expression and inhibited bacterial activity perhaps through affecting carbon fixation. The study provided the foundation to understand the mechanisms of Mg2+ resistance in A.f and may be helpful to improve bioleaching ability for pentlandit.
Journal Article
reduces biofilm quantity in Acidithiobacillus ferrooxidans through inhibiting Type IV pili formation
2018
Bioleaching is a promising process for 350 million tons of Jinchuan low-grade pentlandite. But high concentration of [Mg.sup.2+] is harmful to bioleaching microorganisms. Interestingly, biofilm formation can improve leaching rate. Thus, it is actually necessary to investigate the effect of [Mg.sup.2+] stress on Acidithiobacillus ferrooxidans biofilms formation. In this study, we found that 0.1 and 0.5 M [Mg.sup.2+] stress significantly reduced the total biomass of biofilm in a dose-dependent manner. The observation results of extracellular polymeric substances and bacteria using confocal laser scanning microscopy showed that the biofilm became thinner and looser under [Mg.sup.2+] stress. Whereas 0.1 and 0.5 M [Mg.sup.2+] stress had no remarkable effect on the bacterial viability, the attachment rate of Acidithiobacillus ferrooxidans to pentlandite was reduced by [Mg.sup.2+] stress. Furthermore, sliding motility, twitching motility and the gene expression level of pilV and pilW were inhibited under [Mg.sup.2+] stress. These results suggested that [Mg.sup.2+] reduced biofilm formation through inhibiting pilV and pilW gene expression, decreasing Type IV pili formation and then attenuating the ability of attachment, subduing the active expansion of biofilms mediated by twitching motility. This study provided more information about the effect of [Mg.sup.2+] stress on biofilm formation and may be useful for increasing the leaching rate in low-grade pentlandit.
Journal Article