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American Sign Language for dummies
\"Grasp the rich culture and language of the Deaf community To see people use American Sign Language (ASL) to share ideas is remarkable and fascinating to watch. Now, you have a chance to enter the wonderful world of sign language. American Sign Language For Dummies offers you an easy-to-access introduction so you can get your hands wet with ASL, whether you're new to the language or looking for a great refresher. Used predominantly in the United States, ASL provides the Deaf community with the ability to acquire and develop language and communication skills by utilizing facial expressions and body movements to convey and process linguistic information. With American Sign Language For Dummies, the complex visual-spatial and linguistic principles that form the basis for ASL are broken down, making this a great resource for friends, colleagues, students, education personnel, and parents of Deaf children. Grasp the various ways ASL is communicated Get up to speed on the latest technological advancements assisting the Deaf Understand how cultural background and regionalism can affect communication Practice signing with videos online If you want to get acquainted with Deaf culture and understand what it's like to be part of a special community with a unique shared and celebrated history and language, American Sign Language For Dummies gets you up to speed on ASL fast.\"--Amazon.com description.
Stable isotope fingerprinting: a novel method for identifying plant, fungal, or bacterial origins of amino acids
by
Larsen, Thomas
,
Taylor, D. Lee
,
O'Brien, Diane M.
in
Alaska
,
Amino acids
,
Amino Acids - analysis
2009
Amino acids play an important role in ecology as essential nutrients for animals and as currencies in symbiotic associations. Here we present a new approach to tracing the origins of amino acids by identifying unique patterns of carbon isotope signatures generated by amino acid synthesis in plants, fungi, and bacteria (\"¹³C fingerprints\"). We measured amino acid δ¹³C from 10 C₃ plants, 13 fungi, and 10 bacteria collected and isolated from a boreal forest in interior Alaska, USA, using gas chromatography-combustion-isotope ratio mass spectrometry (GC-C-IRMS). Microorganisms were cultured under amino-acid-free conditions and identified based on DNA sequences. Bacteria, fungi, and plants generated consistent, unique ¹³C fingerprints based on the more complex amino acids (five or more biosynthetic steps) that are classified as essential for animals. Linear discriminant analysis classified all samples correctly with >99% certainty and correctly classified nearly all insect samples from a previous study by diet. Our results suggest that ¹³C fingerprints of amino acids could provide a powerful in situ assay of the biosynthetic sources of amino acids and a potential new tool for understanding nutritional linkages in food webs.
Journal Article
Below-ground plant traits influence tundra plant acquisition of newly thawed permafrost nitrogen
by
Taylor, D. Lee
,
Genet, Hélène
,
Hewitt, Rebecca E.
in
Access
,
Alaska
,
Biological fertilization
2019
1. The release of permafrost-derived nitrogen (N) has the potential to fertilize tundra vegetation, which in turn may stimulate productivity and thus offset carbon (C) losses from thawing permafrost. Below-ground plant traits may mediate ecosystem response to permafrost thaw and associated feedbacks to the atmosphere by differentially conferring access to deep, newly thawed permafrost N. Yet, identifying roots and quantifying root N uptake from deep, cold soils in complex plant communities has proved challenging to date. 2. We investigated plant acquisition of experimentally added ¹⁵N isotope tracer applied at the permafrost boundary in graminoid- and shrub-dominated tundra at Eight Mile Lake, Alaska, when the thaw front was close to its maximum depth, simulating the release of newly thawed permafrost N. We used molecular tools to verify species and estimate biomass, nitrogen, and isotope pools. 3. Root biomass depth distributions follow an asymptotic relationship with depth, typical of other ecosystems. Few species had roots occurring close to the thaw front. Rubus chamaemorus, a short-statured non-mycorrhizal forb, and Carex bigelowii, a sedge, consistently had the deepest roots. Twenty-four hours after isotope addition, we observed that deep-rooted, non-mycorrhizal species had the highest ¹⁵N enrichment values in their fine root tissue indicating that they access deep N late in the growing season when the thaw front is deepest. Deep-rooted plants are therefore able to immediately take up newly thawed permafrost-derived N. During the following growing season, herbaceous, non-mycorrhizal plants allocated tracer above-ground before woody, mycorrhizal plants. Ectomycorrhizal deciduous and ericoid mycorrhizal evergreen shrubs, by contrast, did not have immediate access to the deep N tracer and assimilated it into new foliar tissue gradually over the following growing season. 4. Synthesis. Graminoids and forbs that have immediate access to deep N represent a modest C sink compared to C emissions from thawing permafrost. However, the effwcts of deep N fertilization on shrubs over longer time-scales may stimulate productivity and account for a more considerable N and C sink, constraining the permafrost C-climate feedback.
Journal Article
A first comprehensive census of fungi in soil reveals both hyperdiversity and fine-scale niche partitioning
by
Taylor, D. Lee
,
Nusbaum, Chad
,
Mcfarland, Jack W.
in
Alaska
,
Biodiversity
,
Biological taxonomies
2014
Fungi play key roles in ecosystems as mutualists, pathogens, and decomposers. Current estimates of global species richness are highly uncertain, and the importance of stochastic vs. deterministic forces in the assembly of fungal communities is unknown. Molecular studies have so far failed to reach saturated, comprehensive estimates of fungal diversity. To obtain a more accurate estimate of global fungal diversity, we used a direct molecular approach to census diversity in a boreal ecosystem with precisely known plant diversity, and we carefully evaluated adequacy of sampling and accuracy of species delineation. We achieved the first exhaustive enumeration of fungi in soil, recording 1002 taxa in this system. We show that the fungus:plant ratio in Picea mariana forest soils from interior Alaska is at least 17:1 and is regionally stable. A global extrapolation of this ratio would suggest 6 million species of fungi, as opposed to leading estimates ranging from 616000 to 1.5 million. We also find that closely related fungi often occupy divergent niches. This pattern is seen in fungi spanning all major functional guilds and four phyla, suggesting a major role of deterministic niche partitioning in community assembly. Extinctions and range shifts are reorganizing biodiversity on Earth, yet our results suggest that 98% of fungi remain undescribed and that many of these species occupy unique niches.
Journal Article
Reprogramming the Epigenome With Vitamin C
2019
The erasure of epigenetic modifications across the genome of somatic cells is an essential requirement during their reprogramming into induced pluripotent stem cells (iPSCs). Vitamin C plays a pivotal role in remodeling the epigenome by enhancing the activity of Jumonji-C domain-containing histone demethylases (JHDMs) and the ten-eleven translocation (TET) proteins. By maintaining differentiation plasticity in culture, vitamin C also improves the quality of tissue specific stem cells derived from iPSCs that are highly sought after for use in regenerative medicine. The ability of vitamin C to potentiate the activity of histone and DNA demethylating enzymes also has clinical application in the treatment of cancer. Vitamin C deficiency has been widely reported in cancer patients and has recently been shown to accelerate cancer progression in disease models. Therapies involving high-dose vitamin C administration are currently gaining traction in the treatment of epigenetic dysregulation, by targeting aberrant histone and DNA methylation patterns associated with cancer progression.
Journal Article
Plant Identity Influences Foliar Fungal Symbionts More Than Elevation in the Colorado Rocky Mountains
by
Rudgers, Jennifer A.
,
Kazenel, Melanie R.
,
Lee Taylor, D.
in
altitude
,
Biogeography
,
Biomedical and Life Sciences
2019
Despite colonizing nearly every plant on Earth, foliar fungal symbionts have received little attention in studies on the biogeography of host-associated microbes. Evidence from regional scale studies suggests that foliar fungal symbiont distributions are influenced both by plant hosts and environmental variation in climate and soil resources. However, previous surveys have focused on either one plant host across an environmental gradient or one gradient and multiple plant hosts, making it difficult to disentangle the influence of host identity from the influence of the environment on foliar endophyte communities. We used a culture-based approach to survey fungal symbiont composition in the leaves of nine C₃ grass species along replicated elevation gradients in grasslands of the Colorado Rocky Mountains. In these ecosystems, the taxonomic richness and composition of foliar fungal symbionts were mostly structured by the taxonomic identity of the plant host rather than by variation in climate. Plant traits related to size (height and leaf length) were the best predictors of foliar fungal symbiont composition and diversity, and composition did not vary predictably with plant evolutionary history. The largest plants had the most diverse and distinctive fungal communities. These results suggest that across the ~ 300 m elevation range that we sampled, foliar fungal symbionts may indirectly experience climate change by tracking the shifting distributions of plant hosts rather than tracking climate directly.
Journal Article
An arctic community of symbiotic fungi assembled by long-distance dispersers: phylogenetic diversity of ectomycorrhizal basidiomycetes in Svalbard based on soil and sporocarp DNA
by
Taylor, D. Lee
,
Nusbaum, H. Chad
,
Robinson, Clare H.
in
Agaricales
,
Animal and plant ecology
,
Animal, plant and microbial ecology
2012
Aim: Current evidence from temperate studies suggests that ectomycorrhizal (ECM) fungi require overland routes for migration because of their obligate symbiotic associations with woody plants. Despite their key roles in arctic ecosystems, the phylogenetic diversity and phylogeography of arctic ECM fungi remains little known. Here we assess the phylogenetic diversity of ECM communities in an isolated, formerly glaciated, high arctic archipelago, and provide explanations for their phylogeographic origins. Location: Svalbard. Methods: We generated and analysed internal transcribed spacer (ITS) nuclear ribosomal DNA sequences from both curated sporocarp collections (from Svalbard) and soil polymerase chain reaction (PCR) clone libraries (from Svalbard and the North American Arctic), compared these with publicly available sequences in GenBank, and estimated the phylogenetic diversity of ECM fungi in Svalbard. In addition, we conducted coalescent analyses to estimate migration rates in selected species. Results: Despite Svalbard's geographic isolation and arctic climate, its ECM fungi are surprisingly diverse, with at least 72 non-singleton operational taxonomic units (soil) and 109 phylogroups (soil + sporocarp). The most species-rich genera are Thelephora/Tomentella, Cortinarius and Inocybe, followed by Hebeloma, Russula, Lactarius, Entoloma, Sebacina, Clavulina, Laccaria, Leccinum and Alnicola. Despite the scarcity of available reference data from other arctic regions, the majority of the phylogroups (73.4%) were also found outside Svalbard. At the same time, all putative Svalbard 'endemics' were newly sequenced taxa from diverse genera with massive undocumented diversity. Overall, our results support long-distance dispersal more strongly than vicariance and glacial survival. However, because of the high variation in nucleotide substitution rates among fungi, allopatric persistence since the Pliocene, although unlikely, cannot be statistically rejected. Results from the coalescent analyses suggest recent gene flow among different arctic areas. Main conclusions: Our results indicate numerous recent colonization events and suggest that long-distance, transoceanic dispersal is widespread in arctic ECM fungi, which differs markedly from the currently prevailing view on the dispersal capabilities of ECM fungi. Our molecular evidence indicates that long-distance dispersal has probably played a major role in the phylogeographic history of some ECM fungi in the Northern Hemisphere. Our results may have implications for studies on the biodiversity, ecology and conservation of arctic fungi in general.
Journal Article
Applying the Lorenz Curve and Gini Coefficient to Measure the Population Distribution
by
Lee, Taylor J. C
,
Siddiq, Fazley K
,
Klymentieva, Halyna
in
Air pollution
,
Estate taxes
,
Income inequality
2023
The population distribution in Canada across subnational jurisdictions exhibits significant inequality. Precipitous growth within concentrated urban agglomerations, culminating in severe rural depopulation, has perpetuated existing subnational population growth disparities. More densely populated metropolitan areas are experiencing an increasing proportion of the aggregate population, while ruralized jurisdictions succumb to a dramatic population exodus. Accordingly, the geographic dispersion of the Canadian population has become increasingly skewed, and thus a substantial proportion of the national populace is concentrated within a handful of metropolitan jurisdictions. The localization of growth within urbanized zones renders the geography of the population distribution increasingly volatile, thereby carving a fault line into the landscape of the national economy. Using census data from 1991 to the most recent (2021), this study formulates a novel quantification of the unequal distribution of population in Canada over time, utilizing an adaptation of the Lorenz curve and the Gini coefficient. The findings exhibit significant and growing inequality in the population distribution with a substantial proportion of the national populace concentrated within a few metropolitan areas. Rising rent and real estate prices have led to increasing gentrification, fundamentally altering the economic and social reality of the country.
Journal Article
Volatile chemical products emerging as largest petrochemical source of urban organic emissions
by
McDonald, Brian C.
,
Ryerson, Thomas B.
,
Gentner, Drew R.
in
Adhesives
,
Aerosols
,
Air Pollutants - adverse effects
2018
Transport-derived emissions of volatile organic compounds (VOCs) have decreased owing to stricter controls on air pollution. This means that the relative importance of chemicals in pesticides, coatings, printing inks, adhesives, cleaning agents, and personal care products has increased. McDonald et al. show that these volatile chemical products now contribute fully one-half of emitted VOCs in 33 industrialized cities (see the Perspective by Lewis). Thus, the focus of efforts to mitigate ozone formation and toxic chemical burdens need to be adjusted. Science , this issue p. 760 ; see also p. 744 Chemical products contribute as much organic air pollution as transportation emissions in many cities. A gap in emission inventories of urban volatile organic compound (VOC) sources, which contribute to regional ozone and aerosol burdens, has increased as transportation emissions in the United States and Europe have declined rapidly. A detailed mass balance demonstrates that the use of volatile chemical products (VCPs)—including pesticides, coatings, printing inks, adhesives, cleaning agents, and personal care products—now constitutes half of fossil fuel VOC emissions in industrialized cities. The high fraction of VCP emissions is consistent with observed urban outdoor and indoor air measurements. We show that human exposure to carbonaceous aerosols of fossil origin is transitioning away from transportation-related sources and toward VCPs. Existing U.S. regulations on VCPs emphasize mitigating ozone and air toxics, but they currently exempt many chemicals that lead to secondary organic aerosols.
Journal Article