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"Tefferi, A"
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Novel mutations and their functional and clinical relevance in myeloproliferative neoplasms: JAK2, MPL, TET2, ASXL1, CBL, IDH and IKZF1
2010
Myeloproliferative neoplasms (MPNs) originate from genetically transformed hematopoietic stem cells that retain the capacity for multilineage differentiation and effective myelopoiesis. Beginning in early 2005, a number of novel mutations involving Janus kinase 2 (
JAK2)
, Myeloproliferative Leukemia Virus (
MPL
), TET oncogene family member 2 (
TET2
), Additional Sex Combs-Like 1 (
ASXL1
), Casitas B-lineage lymphoma proto-oncogene (
CBL
), Isocitrate dehydrogenase (
IDH
) and IKAROS family zinc finger 1 (
IKZF1
) have been described in
BCR-ABL1
-negative MPNs. However, none of these mutations were MPN specific, displayed mutual exclusivity or could be traced back to a common ancestral clone.
JAK2
and
MPL
mutations appear to exert a phenotype-modifying effect and are distinctly associated with polycythemia vera, essential thrombocythemia and primary myelofibrosis; the corresponding mutational frequencies are ∼99, 55 and 65% for
JAK2
and 0, 3 and 10% for
MPL
mutations. The incidence of
TET2
,
ASXL1
,
CBL
,
IDH
or
IKZF1
mutations in these disorders ranges from 0 to 17%; these latter mutations are more common in chronic (
TET2
,
ASXL1
,
CBL
) or juvenile (
CBL
) myelomonocytic leukemias, mastocytosis (
TET2
), myelodysplastic syndromes (
TET2
,
ASXL1
) and secondary acute myeloid leukemia, including blast-phase MPN (
IDH
,
ASXL1
,
IKZF1
). The functional consequences of MPN-associated mutations include unregulated JAK-STAT (Janus kinase/signal transducer and activator of transcription) signaling, epigenetic modulation of transcription and abnormal accumulation of oncoproteins. However, it is not clear as to whether and how these abnormalities contribute to disease initiation, clonal evolution or blastic transformation.
Journal Article
Blast transformation and fibrotic progression in polycythemia vera and essential thrombocythemia: a literature review of incidence and risk factors
2015
Polycythemia vera (PV) and essential thrombocythemia (ET) constitute two of the three
BCR-ABL1
-negative myeloproliferative neoplasms and are characterized by relatively long median survivals (approximately 14 and 20 years, respectively). Potentially fatal disease complications in PV and ET include disease transformation into myelofibrosis (MF) or acute myeloid leukemia (AML). The range of reported frequencies for post-PV MF were 4.9–6% at 10 years and 6–14% at 15 years and for post-ET MF were 0.8–4.9% at 10 years and 4–11% at 15 years. The corresponding figures for post-PV AML were 2.3–14.4% at 10 years and 5.5–18.7% at 15 years and for post-ET AML were 0.7–3% at 10 years and 2.1–5.3% at 15 years. Risk factors cited for post-PV MF include advanced age, leukocytosis, reticulin fibrosis, splenomegaly and
JAK2V617F
allele burden and for post-ET MF include advanced age, leukocytosis, anemia, reticulin fibrosis, absence of
JAK2V617F
, use of anagrelide and presence of
ASXL1
mutation. Risk factors for post-PV AML include advanced age, leukocytosis, reticulin fibrosis, splenomegaly, abnormal karyotype,
TP53
or
RUNX1
mutations as well as use of pipobroman, radiophosphorus (P
32
) and busulfan and for post-ET AML include advanced age, leukocytosis, anemia, extreme thrombocytosis, thrombosis, reticulin fibrosis,
TP53
or
RUNX1
mutations. It is important to note that some of the aforementioned incidence figures and risk factor determinations are probably inaccurate and at times conflicting because of the retrospective nature of studies and the inadvertent labeling, in some studies, of patients with prefibrotic primary MF or ‘masked’ PV, as ET. Ultimately, transformation of MPN leads to poor outcomes and management remains challenging. Further understanding of the molecular events leading to disease transformation is being investigated.
Journal Article
Classification and diagnosis of myeloproliferative neoplasms: The 2008 World Health Organization criteria and point-of-care diagnostic algorithms
2008
The 2001 World Health Organization (WHO) treatise on the classification of hematopoietic tumors lists chronic myeloproliferative diseases (CMPDs) as a subdivision of myeloid neoplasms that includes the four classic myeloproliferative disorders (MPDs)—chronic myelogenous leukemia, polycythemia vera (PV), essential thrombocythemia (ET) and primary myelofibrosis (PMF)—as well as chronic neutrophilic leukemia (CNL), chronic eosinophilic leukemia/hypereosinophilic syndrome (CEL/HES) and ‘CMPD, unclassifiable’. In the upcoming 4th edition of the WHO document, due out in 2008, the term ‘CMPDs’ is replaced by ‘myeloproliferative neoplasms (MPNs)’, and the MPN category now includes mast cell disease (MCD), in addition to the other subcategories mentioned above. At the same time, however, myeloid neoplasms with molecularly characterized clonal eosinophilia, previously classified under CEL/HES, are now removed from the MPN section and assembled into a new category of their own. The WHO diagnostic criteria for both the classic
BCR–ABL
-negative MPDs (that is PV, ET and PMF) and CEL/HES have also been revised, in the 2008 edition, by incorporating new information on their molecular pathogenesis. The current review highlights these changes and also provides diagnostic algorithms that are tailored to routine clinical practice.
Journal Article
The Ten-Eleven Translocation-2 (TET2) gene in hematopoiesis and hematopoietic diseases
by
Fuks, F
,
Vainchenker, W
,
Bernard, O A
in
631/208/176/1988
,
692/420/2489/2487/2486
,
692/699/67/1990
2014
Ten-Eleven Translocation-2
(
TET2
) inactivation through loss-of-function mutation, deletion and
IDH1/2
(Isocitrate Dehydrogenase 1 and 2) gene mutation is a common event in myeloid and lymphoid malignancies.
TET2
gene mutations similar to those observed in myeloid and lymphoid malignancies also accumulate with age in otherwise healthy subjects with clonal hematopoiesis. TET2 is one of the three proteins of the TET (Ten-Eleven Translocation) family, which are evolutionarily conserved dioxygenases that catalyze the conversion of 5-methyl-cytosine (5-mC) to 5-hydroxymethyl-cytosine (5-hmC) and promote DNA demethylation. TET dioxygenases require 2-oxoglutarate, oxygen and Fe(II) for their activity, which is enhanced in the presence of ascorbic acid.
TET2
is the most expressed
TET
gene in the hematopoietic tissue, especially in hematopoietic stem cells. In addition to their hydroxylase activity, TET proteins recruit the O-linked β-D-N-acetylglucosamine (O-GlcNAc) transferase (OGT) enzyme to chromatin, which promotes post-transcriptional modifications of histones and facilitates gene expression. The TET2 level is regulated by interaction with IDAX, originating from
TET2
gene fission during evolution, and by the microRNA miR-22. TET2 has pleiotropic roles during hematopoiesis, including stem-cell self-renewal, lineage commitment and terminal differentiation of monocytes. Analysis of
Tet2
knockout mice, which are viable and fertile, demonstrated that Tet2 functions as a tumor suppressor whose haploinsufficiency initiates myeloid and lymphoid transformations. This review summarizes the recently identified TET2 physiological and pathological functions and discusses how this knowledge influences our therapeutic approaches in hematological malignancies and possibly other tumor types.
Journal Article
CALR vs JAK2 vs MPL-mutated or triple-negative myelofibrosis: clinical, cytogenetic and molecular comparisons
by
Finke, C M
,
Ketterling, R
,
Hanson, C H
in
631/208/2489/144
,
631/208/737
,
692/699/67/1990/2331
2014
Calreticulin (
CALR
) mutations were recently described in
JAK2
and
MPL
unmutated primary myelofibrosis (PMF) and essential thrombocythemia. In the current study, we compared the clinical, cytogenetic and molecular features of patients with PMF with or without
CALR
,
JAK2
or
MPL
mutations. Among 254 study patients, 147 (58%) harbored
JAK2
, 63 (25%)
CALR
and 21 (8.3%)
MPL
mutations; 22 (8.7%) patients were negative for all three mutations, whereas one patient expressed both
JAK2
and
CALR
mutations. Study patients were also screened for
ASXL1
(31%),
EZH2
(6%),
IDH
(4%),
SRSF2
(12%),
SF3B1
(7%) and
U2AF1
(16%) mutations. In univariate analysis,
CALR
mutations were associated with younger age (
P
<0.0001), higher platelet count (
P
<0.0001) and lower DIPSS-plus score (
P
=0.02).
CALR
-mutated patients were also less likely to be anemic, require transfusions or display leukocytosis. Spliceosome mutations were infrequent (
P
=0.0001) in
CALR
-mutated patients, but no other molecular or cytogenetic associations were evident. In multivariable analysis,
CALR
mutations had a favorable impact on survival that was independent of both DIPSS-plus risk and
ASXL1
mutation status (
P
=0.001; HR 3.4 for triple-negative and 2.2 for
JAK2
-mutated). Triple-negative patients also displayed inferior LFS (
P
=0.003). The current study identifies ‘CALR
–
ASXL1
+
’ and ‘triple-negative’ as high-risk molecular signatures in PMF.
Journal Article
Cytogenetic and molecular abnormalities in chronic myelomonocytic leukemia
2016
Chronic myelomonocytic leukemia (CMML) is a clonal stem cell disorder associated with peripheral blood monocytosis and an inherent tendency to transform to acute myeloid leukemia. CMML has overlapping features of myelodysplastic syndromes and myeloproliferative neoplasms. Clonal cytogenetic changes are seen in ~30%, whereas gene mutations are seen in >90% of patients. Common cytogenetic abnormalities include; trisomy 8, -Y, -7/del(7q), trisomy 21 and del(20q), with the Mayo–French risk stratification effectively risk stratifying patients based on cytogenetic abnormalities. Gene mutations frequently involve epigenetic regulators (
TET2
~60%), modulators of chromatin (
ASXL1
~40%), spliceosome components (
SRSF2
~50%), transcription factors (
RUNX1
~15%) and signal pathways (
RAS
~30%,
CBL
~15%). Of these, thus far, only nonsense and frameshift
ASXL1
mutations have been shown to negatively impact overall survival. This has resulted in the development of contemporary, molecularly integrated (inclusive of
ASXL1
mutations) CMML prognostic models, including Molecular Mayo Model and the Groupe Français des Myélodysplasies model. Better understanding of the prevalent genetic and epigenetic dysregulation has resulted in emerging targeted treatment options for some patients. The development of an integrated (cytogenetic and molecular) prognostic model along with CMML-specific response assessment criteria are much needed future goals.
Journal Article
An overview on CALR and CSF3R mutations and a proposal for revision of WHO diagnostic criteria for myeloproliferative neoplasms
by
Vannucchi, A M
,
Thiele, J
,
Barbui, T
in
631/208/737
,
692/420/2489/144/68
,
692/699/67/1990/2331
2014
Disease-specific mutations facilitate diagnostic precision and drug target discovery. In myeloproliferative neoplasms (MPN), this is best exemplified by the chronic myeloid leukemia-associated
BCR-ABL1
. No other mutation in MPN has thus far shown a similar degree of diagnostic accuracy or therapeutic relevance. However,
JAK2
and
KIT
mutations are detected in more than 90% of patients with polycythemia vera and systemic mastocytosis, respectively, and are therefore used as highly sensitive clonal markers in these diseases.
JAK2
and
MPL
mutations also occur in essential thrombocythemia (ET) and primary myelofibrosis (PMF), but their diagnostic value is limited by suboptimal sensitivity and specificity. The molecular diagnostic gap in
JAK2/MPL
-unmutated ET/PMF is now partially addressed by the recent discovery of calreticulin (
CALR
) mutations in the majority of such cases. However, bone marrow morphology remains the central diagnostic platform and is essential for distinguishing ET from prefibrotic PMF and diagnosing patients those do not express
JAK2
,
MPL
or
CALR
(triple-negative). The year 2013 was also marked by the description of
CSF3R
mutations in the majority of patients with chronic neutrophilic leukemia (CNL). Herein, we argue for the inclusion of
CALR
and
CSF3R
mutations in the World Health Organization classification system for ET/PMF and CNL, respectively.
Journal Article
The history of myeloproliferative disorders: before and after Dameshek
In 1951, William Dameshek described the concept of ‘myeloproliferative disorders (MPDs)’ by grouping together chronic myelogenous leukemia (CML), polycythemia vera (PV), essential thrombocythemia (ET), primary myelofibrosis (PMF) and erythroleukemia; he reasoned that a self-perpetuating trilineage myeloproliferation underlined their pathogenesis. Pre-Dameshek luminaries who laid the foundation for this unifying concept include Bennett, Virchow, Heuck, Vaquez, Osler, Di Guglielmo and Epstein. In 1960, Nowell and Hungerford discovered the Philadelphia (Ph) chromosome in CML. In 1967, Fialkow and colleagues used X-linked polymorphisms to establish CML as a clonal stem cell disease. Also in 1967, the PV Study Group was summoned by Louis Wasserman to study the natural history of PV and conduct large-scale clinical trials. In 1972, Janet Rowley deciphered the Ph chromosome as a reciprocal translocation between chromosomes 9 and 22, thus paving the way for its subsequent characterization as an oncogenic
BCR–ABL
mutation. In 1996, Brian Druker discovered imatinib—a small molecule ABL inhibitor with exceptional therapeutic activity in CML. In 2005, a gain-of-function
JAK2
mutation (
JAK2
V617F) was described in
BCR–ABL
-negative MPDs, raising the prospect of a CML-like treatment strategy in PV, ET and PMF. The current review considers these and other landmark events in the history of MPDs.
Journal Article
CALR and ASXL1 mutations-based molecular prognostication in primary myelofibrosis: an international study of 570 patients
2014
Current prognostication in primary myelofibrosis (PMF) is based on the dynamic international prognostic scoring system (DIPSS)-plus, which employs clinical and cytogenetic variables. We recently reported DIPSS-plus independent prognostic significance for calreticulin (
CALR
) (favorable) and
ASXL1
(unfavorable) mutations. In the current study, 570 PMF patients were recruited for derivation (
n
=277) and validation (
n
=293) of a molecular prognostic model based on these two mutations. Survival was the longest in
CALR
+
ASXL1
−
(median 10.4 years) and shortest in
CALR
−
ASXL1
+
patients (median, 2.3 years; hazard ratio (HR), 5.9; 95% confidence interval (CI), 3.5–10.0).
CALR
+
ASXL1
+
and
CALR
–
ASXL1
−
patients had similar survival and were grouped together in an intermediate-risk category (median survival, 5.8 years; HR, 2.5; 95% CI, 1.5–4.0). The
CALR
/
ASXL1
mutations-based prognostic model was DIPSS-plus independent (
P
<0.0001) and effective in identifying low-/intermediate-1-risk patients with shorter (median, 4 years) or longer (median 20 years) survival and high-/intermediate-2-risk patients with shorter (median, 2.3 years) survival. Multivariable analysis distinguished
CALR
−
ASXL1
+
mutational status as the most significant risk factor for survival: HR 3.7 vs 2.8 for age >65 years vs 2.7 for unfavorable karyotype. These observations signify immediate clinical relevance and warrant i)
CALR
and
ASXL1
mutation determination in all patients with PMF and ii) molecular revision of DIPSS-plus.
Journal Article