Catalogue Search | MBRL
Search Results Heading
Explore the vast range of titles available.
MBRLSearchResults
-
DisciplineDiscipline
-
Is Peer ReviewedIs Peer Reviewed
-
Item TypeItem Type
-
SubjectSubject
-
YearFrom:-To:
-
More FiltersMore FiltersSourceLanguage
Done
Filters
Reset
45
result(s) for
"Tejasvi, Trilokraj"
Sort by:
Potential Use of ChatGPT in Responding to Patient Questions and Creating Patient Resources
2024
ChatGPT (OpenAI) is an artificial intelligence–based free natural language processing model that generates complex responses to user-generated prompts. The advent of this tool comes at a time when physician burnout is at an all-time high, which is attributed at least in part to time spent outside of the patient encounter within the electronic medical record (documenting the encounter, responding to patient messages, etc). Although ChatGPT is not specifically designed to provide medical information, it can generate preliminary responses to patients’ questions about their medical conditions and can precipitately create educational patient resources, which do inevitably require rigorous editing and fact-checking on the part of the health care provider to ensure accuracy. In this way, this assistive technology has the potential to not only enhance a physician’s efficiency and work-life balance but also enrich the patient-physician relationship and ultimately improve patient outcomes.
Journal Article
Large scale meta-analysis characterizes genetic architecture for common psoriasis associated variants
2017
Psoriasis is a complex disease of skin with a prevalence of about 2%. We conducted the largest meta-analysis of genome-wide association studies (GWAS) for psoriasis to date, including data from eight different Caucasian cohorts, with a combined effective sample size >39,000 individuals. We identified 16 additional psoriasis susceptibility loci achieving genome-wide significance, increasing the number of identified loci to 63 for European-origin individuals. Functional analysis highlighted the roles of interferon signalling and the NFκB cascade, and we showed that the psoriasis signals are enriched in regulatory elements from different T cells (CD8
+
T-cells and CD4
+
T-cells including T
H
0, T
H
1 and T
H
17). The identified loci explain ∼28% of the genetic heritability and generate a discriminatory genetic risk score (AUC=0.76 in our sample) that is significantly correlated with age at onset (
p=
2 × 10
−89
). This study provides a comprehensive layout for the genetic architecture of common variants for psoriasis.
Psoriasis is an immune-mediated skin disease with a complex genetic architecture. Here, Elder and colleagues identify 16 novel psoriasis susceptibility loci using GWAS meta-analysis with a combined effective sample size of over 39,000 individuals.
Journal Article
Dermoscopy practice guidelines for use in telemedicine
by
Tejasvi, Trilokraj
,
Jamerson, Taylor A.
,
Goldberg, Rebecca H.
in
692/700/139/1735
,
692/700/228
,
706/648/160
2022
Teledermoscopy, or the utilization of dermatoscopic images in telemedicine, can help diagnose dermatologic disease remotely, triage lesions of concern (i.e., determine whether in-person consultation with a dermatologist is necessary, biopsy, or reassure the patient), and monitor dermatologic lesions over time. Handheld dermatoscopes, a magnifying apparatus, have become a commonly utilized tool for providers in many healthcare settings and professions and allows users to view microstructures of the epidermis and dermis. This Dermoscopy Practice Guideline reflects current knowledge in the field of telemedicine to demonstrate the correct capture, usage, and incorporation of dermoscopic images into everyday practice.
Journal Article
Analysis of long non-coding RNAs highlights tissue-specific expression patterns and epigenetic profiles in normal and psoriatic skin
by
Tejasvi, Trilokraj
,
Voorhees, John J
,
Ding, Jun
in
Annotations
,
Autoimmune diseases
,
Cluster Analysis
2015
Although analysis pipelines have been developed to use RNA-seq to identify long non-coding RNAs (lncRNAs), inference of their biological and pathological relevance remains a challenge. As a result, most transcriptome studies of autoimmune disease have only assessed protein-coding transcripts.
We used RNA-seq data from 99 lesional psoriatic, 27 uninvolved psoriatic, and 90 normal skin biopsies, and applied computational approaches to identify and characterize expressed lncRNAs. We detect 2,942 previously annotated and 1,080 novel lncRNAs which are expected to be skin specific. Notably, over 40% of the novel lncRNAs are differentially expressed and the proportions of differentially expressed transcripts among protein-coding mRNAs and previously-annotated lncRNAs are lower in psoriasis lesions versus uninvolved or normal skin. We find that many lncRNAs, in particular those that are differentially expressed, are co-expressed with genes involved in immune related functions, and that novel lncRNAs are enriched for localization in the epidermal differentiation complex. We also identify distinct tissue-specific expression patterns and epigenetic profiles for novel lncRNAs, some of which are shown to be regulated by cytokine treatment in cultured human keratinocytes.
Together, our results implicate many lncRNAs in the immunopathogenesis of psoriasis, and our results provide a resource for lncRNA studies in other autoimmune diseases.
Journal Article
Prognostic value of intratumoral lymphocyte-to-monocyte ratio and M0 macrophage enrichment in tumor immune microenvironment of melanoma
by
Harms, Paul W
,
Farha, Mark W
,
Jairath, Ruple
in
Cancer therapies
,
cutaneous melanoma
,
Datasets
2020
Skin cutaneous melanoma is characterized by significant heterogeneity in its molecular, genomic and immunologic features. Whole transcriptome RNA sequencing data from The Cancer Genome Atlas of skin cutaneous melanoma (n = 328) was utilized. CIBERSORT was used to identify immune cell type composition, on which unsupervised hierarchical clustering was performed. Analysis of overall survival was performed using Kaplan–Meier estimates and multivariate Cox regression analyses. Membership in the lymphocyte:monocyte
, monocyte
and M0
cluster was an independently poor prognostic factor for survival (HR: 3.03; 95% CI: 1.12–8.20; p = 0.029) and correlated with decreased predicted response to immune checkpoint blockade. In conclusion, an M0-macrophage-enriched, lymphocyte-to-monocyte-ratio-low phenotype in the primary melanoma tumor site independently characterizes an aggressive phenotype that may differentially respond to treatment.
Journal Article
Enhanced meta-analysis and replication studies identify five new psoriasis susceptibility loci
by
Tejasvi, Trilokraj
,
Tsoi, Lam C.
,
Enerback, Charlotta
in
631/208/205/2138
,
631/208/727/2000
,
692/699/249/1313/1758
2015
Psoriasis is a chronic autoimmune disease with complex genetic architecture. Previous genome-wide association studies (GWAS) and a recent meta-analysis using Immunochip data have uncovered 36 susceptibility loci. Here, we extend our previous meta-analysis of European ancestry by refined genotype calling and imputation and by the addition of 5,033 cases and 5,707 controls. The combined analysis, consisting of over 15,000 cases and 27,000 controls, identifies five new psoriasis susceptibility loci at genome-wide significance (
P
<5 × 10
−8
). The newly identified signals include two that reside in intergenic regions (1q31.1 and 5p13.1) and three residing near
PLCL2
(3p24.3),
NFKBIZ
(3q12.3) and
CAMK2G
(10q22.2). We further demonstrate that
NFKBIZ
is a
TRAF3IP2
-dependent target of IL-17 signalling in human skin keratinocytes, thereby functionally linking two strong candidate genes. These results further integrate the genetics and immunology of psoriasis, suggesting new avenues for functional analysis and improved therapies.
About 2% of the population are affected by psoriasis, a chronic skin disease with complex genetics. Here Tsoi
et al.
conduct a meta-analysis of several genome-wide association studies and identify five novel loci, helping to further our understanding of the biology behind this condition.
Journal Article
Dermoscopy to distinguish idiopathic guttate hypomelanosis from guttate lichen sclerosus flare
by
Briones, Naomi F.
,
Tejasvi, Trilokraj
,
Goldberg, Rebecca H.
in
Case Reports
,
dermoscopy
,
idiopathic guttate hypomelanosis
2024
Guttate lichen sclerosus (LS), a rare variant of extragenital LS, is an inflammatory disorder classically presenting with whitish patches and nodules coalescing into plaques. Idiopathic guttate hypomelanosis (IGH) is a benign, typically asymptomatic idiopathic leukoderma that presents with multiple round or oval porcelain-white macules on sun-exposed areas, especially the forearm extensor surface and shins. In this study, we report a case of IGH mimicking guttate LS in a patient, highlighting the importance of dermoscopic evaluation in the diagnosis of hypopigmented skin lesions in patients with skin of color.
Journal Article
Genetic signature to provide robust risk assessment of psoriatic arthritis development in psoriasis patients
2018
Psoriatic arthritis (PsA) is a complex chronic musculoskeletal condition that occurs in ~30% of psoriasis patients. Currently, no systematic strategy is available that utilizes the differences in genetic architecture between PsA and cutaneous-only psoriasis (PsC) to assess PsA risk before symptoms appear. Here, we introduce a computational pipeline for predicting PsA among psoriasis patients using data from six cohorts with >7000 genotyped PsA and PsC patients. We identify 9 new loci for psoriasis or its subtypes and achieve 0.82 area under the receiver operator curve in distinguishing PsA vs. PsC when using 200 genetic markers. Among the top 5% of our PsA prediction we achieve >90% precision with 100% specificity and 16% recall for predicting PsA among psoriatic patients, using conditional inference forest or shrinkage discriminant analysis. Combining statistical and machine-learning techniques, we show that the underlying genetic differences between psoriasis subtypes can be used for individualized subtype risk assessment.
Approximately 30% of psoriasis patients develop psoriatic arthritis (PsA) and early diagnosis is crucial for the management of PsA. Here, Patrick et al. develop a computational pipeline involving statistical and machine-learning methods that can assess the risk of progression to PsA based on genetic markers.
Journal Article
Molecular Dissection of Psoriasis: Integrating Genetics and Biology
by
Elder, James T.
,
Tejasvi, Trilokraj
,
Nair, Rajan P.
in
Biological and medical sciences
,
Dermatology
,
Genetic Markers
2010
Psoriasis is a common and debilitating disease of the skin, nails, and joints, with an acknowledged but complex genetic basis. Early genome-wide linkage studies of psoriasis focused on segregation of microsatellite markers in families; however, the only locus consistently identified resided in the major histocompatibility complex. Subsequently, several groups mapped this locus to the vicinity of HLA-C, and two groups have reported HLA-Cw6 itself to be the major susceptibility allele. More recently, the development of millions of single-nucleotide polymorphisms, coupled with the development of high-throughput genotyping platforms and a comprehensive map of human haplotypes, has made possible a genome-wide association approach using cases and controls rather than families. Taking advantage of these developments, we participated in a collaborative genome-wide association study of psoriasis involving thousands of cases and controls. Initial analysis of these data revealed and/or confirmed association between psoriasis and seven genetic loci—HLA-C, IL12B, IL23R, IL23A, IL4/IL13, TNFAIP3, and TNIP1—and ongoing studies are revealing additional loci. Here, we review the epidemiology, immunopathology, and genetics of psoriasis, and present a disease model integrating its genetics and immunology.
Journal Article
Genome-wide association analysis identifies three psoriasis susceptibility loci
by
Tejasvi, Trilokraj
,
Ike, Robert
,
Voorhees, John J
in
631/208/205/2138
,
631/208/727/2000
,
692/699/249/1313/1758
2010
James Elder and colleagues report meta-analyses of two psoriasis genome-wide association studies with replication in additional cohorts. They make use of imputation using both the HapMap and initial 1000 Genomes Project datasets and identify three new psoriasis susceptibility loci.
We carried out a meta-analysis of two recent psoriasis genome-wide association studies
1
,
2
with a combined discovery sample of 1,831 affected individuals (cases) and 2,546 controls. One hundred and two loci selected based on
P
value rankings were followed up in a three-stage replication study including 4,064 cases and 4,685 controls from Michigan, Toronto, Newfoundland and Germany. In the combined meta-analysis, we identified three new susceptibility loci, including one at
NOS2
(rs4795067, combined
P
= 4 × 10
−11
), one at
FBXL19
(rs10782001, combined
P
= 9 × 10
−10
) and one near
PSMA6
-
NFKBIA
(rs12586317, combined
P
= 2 × 10
−8
). All three loci were also associated with psoriatic arthritis (rs4795067, combined
P
= 1 × 10
−5
; rs10782001, combined
P
= 4 × 10
−8
; and rs12586317, combined
P
= 6 × 10
−5
) and purely cutaneous psoriasis (rs4795067, combined
P
= 1 × 10
−8
; rs10782001, combined
P
= 2 × 10
−6
; and rs12586317, combined
P
= 1 × 10
−6
). We also replicated a recently identified
3
association signal near
RNF114
(rs495337, combined
P
= 2 × 10
−7
).
Journal Article