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Human activities are drastically altering water and material flows in river systems across Asia. These anthropogenic perturbations have rarely been linked to the carbon (C) fluxes of Asian rivers that may account for up to 40–50 % of the global fluxes. This review aims to provide a conceptual framework for assessing the human impacts on Asian river C fluxes, along with an update on anthropogenic alterations of riverine C fluxes. Drawing on case studies conducted in three selected rivers (the Ganges, Mekong, and Yellow River) and other major Asian rivers, the review focuses on the impacts of river impoundment and pollution on CO2 outgassing from the rivers draining South, Southeast, and East Asian regions that account for the largest fraction of river discharge and C exports from Asia and Oceania. A critical examination of major conceptual models of riverine processes against observed trends suggests that to better understand altered metabolisms and C fluxes in “anthropogenic land-water-scapes”, or riverine landscapes modified by human activities, the traditional view of the river continuum should be complemented with concepts addressing spatial and temporal discontinuities created by human activities, such as river impoundment and pollution. Recent booms in dam construction on many large Asian rivers pose a host of environmental problems, including increased retention of sediment and associated C. A small number of studies that measured greenhouse gas (GHG) emissions in dammed Asian rivers have reported contrasting impoundment effects: decreased GHG emissions from eutrophic reservoirs with enhanced primary production vs. increased emissions from the flooded vegetation and soils in the early years following dam construction or from the impounded reaches and downstream estuaries during the monsoon period. These contrasting results suggest that the rates of metabolic processes in the impounded and downstream reaches can vary greatly longitudinally over time as a combined result of diel shifts in the balance between autotrophy and heterotrophy, seasonal fluctuations between dry and monsoon periods, and a long-term change from a leaky post-construction phase to a gradual C sink. The rapid pace of urbanization across southern and eastern Asian regions has dramatically increased municipal water withdrawal, generating annually 120 km3 of wastewater in 24 countries, which comprises 39 % of the global municipal wastewater production. Although municipal wastewater constitutes only 1 % of the renewable surface water, it can disproportionately affect the receiving river water, particularly downstream of rapidly expanding metropolitan areas, resulting in eutrophication, increases in the amount and lability of organic C, and pulse emissions of CO2 and other GHGs. In rivers draining highly populated metropolitan areas, lower reaches and tributaries, which are often plagued by frequent algal blooms and pulsatile CO2 emissions from urban tributaries delivering high loads of wastewater, tended to exhibit higher levels of organic C and the partial pressure of CO2 (pCO2) than less impacted upstream reaches and eutrophic impounded reaches. More field measurements of pCO2, together with accurate flux calculations based on river-specific model parameters, are required to provide more accurate estimates of GHG emissions from the Asian rivers that are now underrepresented in the global C budgets. The new conceptual framework incorporating discontinuities created by impoundment and pollution into the river continuum needs to be tested with more field measurements of riverine metabolisms and CO2 dynamics across variously affected reaches to better constrain altered fluxes of organic C and CO2 resulting from changes in the balance between autotrophy and heterotrophy in increasingly human-modified river systems across Asia and other continents.

Intensive cropping, especially of rice, is considered to contribute to negative effects not only on soil chemical and biological properties but also on long-term grain yield. Appropriate crop rotation is often practiced as an alternative strategy to overcome the negative side effects of intensive cropping. Although soil microbial diversity and community structure have been shown to respond differently to altered agricultural management practices, little is known about possible links between crop rotation and grain yield on bacterial communities in rice paddy soil. In this study, we investigated the impact of specific rotational crops and compared it with intensive rice cultivation. The main crop rice ( Oryza sativa ) was rotated with maize ( Zea mays ) and mungbean ( Phaseolus aureus ) in different combinations in a system cultivating three crops per year. Soil bacterial communities were studied in two different cropping periods using pyrosequencing of the variable V4 region of the 16S rRNA. Our results showed that rotation with alternative crops increased rice yield by 24–46% depending on rotation structure and that bacterial community structure was altered in the presence of mungbean and/or maize compared to that in rice monoculture. In the crop rotation systems, composition, abundance, and diversity of soil bacterial communities were significantly different and higher than those in rice monoculture. Our results show that effects of crop rotation relate to changes in soil bacterial community structure suggesting that appropriate crop rotations provide a feasible practice to maintain the equilibrium in soil microbial environment for sustainable rice cultivation.

Soil phosphorus is heavily restricted by soil acidification and salinization. There is a need to determine a biological solution for this issue to replace the overuse of chemical phosphorus fertilizer that aggravates adverse conditions, such as salinity, acidity, and metallic toxicity. Therefore, this study aimed at determining the phosphorus dynamics in terms of the soil, growth, and yield of rice under the supplementation of phosphate (P)-solubilizing purple nonsulfur bacteria (PNSB), Cereibacter sphaeroides ST16 and ST26, in salinized soil collected from An Bien district, Kien Giang province, Vietnam, under greenhouse conditions. The experiment followed a completely randomized block design with two factors and four replications. In particular, the reduced percentages of P fertilizer (A) were 0%, 25%, 50%, 75%, and 100% P. The supplementations of C. sphaeroides strains (B) were the negative control, ST16, ST26, and a mixture of both ST16 and ST26. The results showed that supplying the C. sphaeroides ST16 and ST26 reduced the insoluble P content by 10.1–10.6% Fe-P, 10.3–12.2% Ca-P, and 12.7–43.1% Al-P and increased available P by 8.33–27.8%, leading to total P uptake in plants increasing by 29.4–56.1%. The C. sphaeroides strains also reduced soil Na+. Therefore, supplying the C. sphaeroides strains increased the rice growth and yield components of rice, leading to a greater yield of 26.5–51.0%. Supplying each strain of ST16 and ST26 reduced 50–100% P fertilizer as recommended. Ultimately, inoculation of the bacterial mixture allowed a reduction by 100% P fertilizer percentage as recommended but the yield remained the still.

Breast cancer remains the most common malignant cancer in women, with a staggering incidence of two million cases annually worldwide; therefore, it is crucial to explore novel biomarkers to assess the diagnosis and prognosis of breast cancer patients. NIMA-related kinase (NEK) protein kinase contains 11 family members named NEK1-NEK11, which were discovered from Aspergillus Nidulans; however, the role of NEK family genes for tumor development remains unclear and requires additional study. In the present study, we investigate the prognosis relationships of NEK family genes for breast cancer development, as well as the gene expression signature via the bioinformatics approach. The results of several integrative analyses revealed that most of the NEK family genes are overexpressed in breast cancer. Among these family genes, NEK2/6/8 overexpression had poor prognostic significance in distant metastasis-free survival (DMFS) in breast cancer patients. Meanwhile, NEK2/6 had the highest level of DNA methylation, and the functional enrichment analysis from MetaCore and Gene Set Enrichment Analysis (GSEA) suggested that NEK2 was associated with the cell cycle, G2M checkpoint, DNA repair, E2F, MYC, MTORC1, and interferon-related signaling. Moreover, Tumor Immune Estimation Resource (TIMER) results showed that the transcriptional levels of NEK2 were positively correlated with immune infiltration of B cells and CD4+ T Cell. Collectively, the current study indicated that NEK family genes, especially NEK2 which is involved in immune infiltration, and may serve as prognosis biomarkers for breast cancer progression.

Soluble phosphorus (P) and P uptake are heavily affected by adverse conditions, such as salinity and acidity. The study aimed to evaluate the effects of P-solubilizing purple nonsulfur bacteria (PSPNSB) on soil characteristics, P uptake, growth, and yield of rice planted in saline soil in Thoi Binh – Ca Mau under greenhouse conditions. The pot experiment was completely randomized in blocks with two factors. Factor A was the rate of phosphorus chemical fertilization at 0, 25, 50, 75, and 100% P according to the recommendation. Factor B was the PSPNSB including a single strain of ST16 or ST26 and a mixture of them. The soluble P in soil increased by 16.4–18.2% when ST16 and ST26 were supplied singly or in the mixture, leading to the increase in total P uptake in rice by 19.2–30.1% in two continuous crops. Moreover, the growth and yield components of rice were also improved, leading to an increase in rice grain yield by 7.20–17.7%. Moreover, supplying the strains reduced Na in soil and Na content in stem, leaves, and grains, leading to the reduction in proline content in rice. Supplying the ST16 and ST26 or their mixture replaced 100% P fertilizer but still ensured the rice grain yield. Further approaches should be made to investigate the possibility of the potent strains replacing chemical P fertilizers under field conditions.

Aspergillus oryzae is a filamentous fungus widely used in food industry and as a microbial cell factory for recombinant protein production. Due to the inherent resistance of A. oryzae to common antifungal compounds, genetic transformation of this mold usually requires auxotrophic mutants. In this study, we show that Agrobacterium tumefaciens -mediated transformation (ATMT) method is very efficient for deletion of the pyrG gene in different Aspergillus oryzae wild-type strains to generate uridine/uracil auxotrophic mutants. Our data indicated that all the obtained uridine/uracil auxotrophic transformants, which are 5- fluoroorotic acid (5-FOA) resistant, exist as the pyrG deletion mutants. Using these auxotrophic mutants and the pyrG selectable marker for genetic transformation via A. tumefaciens , we could get about 1060 transformants per 10 6 fungal spores. In addition, these A. oryzae mutants were also used successfully for expression of the DsRed fluorescent reporter gene under control of the A. oryzae amyB promoter by the ATMT method, which resulted in obvious red transformants on agar plates. Our work provides a new and effective approach for constructing the uridine/uracil auxotrophic mutants in the importantly industrial fungus A. oryzae . This strategy appears to be applicable to other filamentous fungi to develop similar genetic transformation systems based on auxotrophic/nutritional markers for food-grade recombinant applications.

The complexity of breast cancer includes many interacting biological processes, and proteasome alpha (PSMA) subunits are reported to be involved in many cancerous diseases, although the transcriptomic expression of this gene family in breast cancer still needs to be more thoroughly investigated. Consequently, we used a holistic bioinformatics approach to study the PSMA genes involved in breast cancer by integrating several well-established high-throughput databases and tools, such as cBioPortal, Oncomine, and the Kaplan–Meier plotter. Additionally, correlations of breast cancer patient survival and PSMA messenger RNA expressions were also studied. The results demonstrated that breast cancer tissues had higher expression levels of PSMA genes compared to normal breast tissues. Furthermore, PSMA2, PSMA3, PSMA4, PSMA6, and PSMA7 showed high expression levels, which were correlated with poor survival of breast cancer patients. In contrast, PSMA5 and PSMA8 had high expression levels, which were associated with good prognoses. We also found that PSMA family genes were positively correlated with the cell cycle, ubiquinone metabolism, oxidative stress, and immune response signaling, including antigen presentation by major histocompatibility class, interferon-gamma, and the cluster of differentiation signaling. Collectively, these findings suggest that PSMA genes have the potential to serve as novel biomarkers and therapeutic targets for breast cancer. Nevertheless, the bioinformatic results from the present study would be strengthened with experimental validation in the future by prospective studies on the underlying biological mechanisms of PSMA genes and breast cancer.

Large construction projects are inherently complex and dynamic. A comprehensive answer on how to manage such projects successfully is difficult to provide. This paper expounds on the success factors for large construction projects in Vietnam. A survey questionnaire was used to collect data from practitioners. Factor analysis was employed to categorize these success factors perceived by 109 respondents from 42 construction-related organizations. Factor analysis uncovered that these success factors can be grouped under four categories, here titled the four COMs: comfort, competence, commitment, and communication. The result can be used as a guideline to successfully handle construction projects in Vietnam as well as in other countries, especially in the emerging economies in Asia and the rest of the world.

Fluorescence nanosilica-based cell tracker has been explored and applied in cell biological research. However, the aggregation of these nanoparticles at physiological pH is still the main limitation. In this research, we introduced a novel fluorescence nano-based cell tracker suitable for application in live cells. The silica-coated fluorescein isothiocyanate isomer (FITC-SiO 2 ) nanoparticles (NPs) were modified with carboxymethylsilanetriol disodium salt (FITC-SiO 2 -COOH), integrating the dianion form of FITC molecules. This nanosystem exhibited superior dispersion in aqueous solutions and effectively mitigated dye leakage. These labeled NPs displayed notable biocompatibility and minimal cytotoxicity in both in vitro and in vivo conditions. Significantly, the NPs did not have negative implications on cell migration or angiogenesis. They successfully penetrated primary fibroblasts, human umbilical vein endothelial cells and HeLa cells in both 2D and 3D cultures, with the fluorescence signal enduring for over 72 h. Furthermore, the NP signals were consistently observed in the developing gastrointestinal tract of live medaka fish larvae for extended periods during phases of subdued digestive activity, without manifesting any apparent acute toxicity. These results underscore the promising utility of FITC-SiO 2 -COOH NPs as advanced live cell trackers in biological research.

We carried out an in-depth study on structural characteristics, both primary and conformational structure in solution of a novel sulfated polysaccharide from green seaweed Codium geppiorum collected in central coast of Vietnam. Primary structure of the polysaccharide was determined mainly by NMR spectra, while conformation was elucidated by using small-angle X-ray scattering method. The polysaccharide was evaluated for its cytotoxic effects on three human cancer cell lines. The results indicated that dominant structure of Codium geppiorum polysaccharide is a linear sulfated galactan, and it was composed of → 4)- β -D-Gal p 3S-(1 → , → 3)- β -D-Gal p 4S-(1 → and → 3)- β -D-Gal p -(1 → residues connected through 1,3-linkages. The polysaccharide has a rodlike conformation in aqueous solution, and it shows chain association with cross-sectional radius of gyration, R gc , around 0.70 nm as estimated from small-angle X-ray scattering measurements. The polysaccharide exhibited a significant cytotoxic activity against HT29 (colorectal adenocarcinoma), 8505c (undifferentiated thyroid carcinomas) and Hela (cervical cancer) human cancer cell lines with IC 50 values of 51.85 ± 2.30, 89.30 ± 2.35 and 72.22 ± 6.73 µg/mL, respectively.