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High-throughput nucleic acid sequencing has greatly accelerated the discovery of viruses in the environment. Mosquitoes, because of their public health importance, are among those organisms whose viromes are being intensively characterized. Despite the deluge of sequence information, our understanding of the major drivers influencing the ecology of mosquito viromes remains limited. Using methods to increase the relative proportion of microbial RNA coupled with RNA-seq we characterize RNA viruses and other symbionts of three mosquito species collected along a rural to urban habitat gradient in Thailand. The full factorial study design allows us to explicitly investigate the relative importance of host species and habitat in structuring viral communities. We found that the pattern of virus presence was defined primarily by host species rather than by geographic locations or habitats. Our result suggests that insect-associated viruses display relatively narrow host ranges but are capable of spreading through a mosquito population at the geographical scale of our study. We also detected various single-celled and multicellular microorganisms such as bacteria, alveolates, fungi, and nematodes. Our study emphasizes the importance of including ecological information in viromic studies in order to gain further insights into viral ecology in systems where host specificity is driving both viral ecology and evolution.

Recent years have seen the greatest ecological disturbances of our times, with global human expansion, species and habitat loss, climate change, and the emergence of new and previously-known infectious diseases. Biodiversity loss affects infectious disease risk by disrupting normal relationships between hosts and pathogens. Mosquito-borne pathogens respond to changing dynamics on multiple transmission levels and appear to increase in disturbed systems, yet current knowledge of mosquito diversity and the relative abundance of vectors as a function of habitat change is limited. We characterize mosquito communities across habitats with differing levels of anthropogenic ecological disturbance in central Thailand. During the 2008 rainy season, adult mosquito collections from 24 sites, representing 6 habitat types ranging from forest to urban, yielded 62,126 intact female mosquitoes (83,325 total mosquitoes) that were assigned to 109 taxa. Female mosquito abundance was highest in rice fields and lowest in forests. Diversity indices and rarefied species richness estimates indicate the mosquito fauna was more diverse in rural and less diverse in rice field habitats, while extrapolated estimates of true richness (Chao1 and ACE) indicated higher diversity in the forest and fragmented forest habitats and lower diversity in the urban. Culex sp. (Vishnui subgroup) was the most common taxon found overall and the most frequent in fragmented forest, rice field, rural, and suburban habitats. The distributions of species of medical importance differed significantly across habitat types and were always lowest in the intact, forest habitat. The relative abundance of key vector species, Aedes aegypti and Culex quinquefasciatus, was negatively correlated with diversity, suggesting that direct species interactions and/or habitat-mediated factors differentially affecting invasive disease vectors may be important mechanisms linking biodiversity loss to human health. Our results are an important first step for understanding the dynamics of mosquito vector distributions under changing environmental features across landscapes of Thailand.

Despite the increasing burden of dengue, the regional emergence of the virus in Kenya has not been examined. This study investigates the genetic structure and regional spread of dengue virus-2 in Kenya. Viral RNA from acutely ill patients in Kenya was enriched and sequenced. Six new dengue-2 genomes were combined with 349 publicly available genomes and phylogenies used to infer gene flow between Kenya and other countries. Analyses indicate two dengue-2 Cosmopolitan genotype lineages circulating in Kenya, linked to recent outbreaks in coastal Kenya and Burkina Faso. Lineages circulating in Western, Southern, and Eastern Africa exhibiting similar evolutionary features are also reported. Phylogeography suggests importation of dengue-2 into Kenya from East and Southeast Asia and bidirectional geneflow. Additional lineages circulating in Africa are also imported from East and Southeast Asia. These findings underscore how intermittent importations from East and Southeast Asia drive dengue-2 circulation in Kenya and Africa more broadly. There is limited data about local emergence and spread of dengue virus in East African countries. In this study, the authors investigate genetic and geographic epidemiology of dengue virus 2 in East Africa and report co-circulation of multiple distinct lineages introduced from regions in East and Southeast Asia.

Vector‐borne diseases are a major health burden, yet factors affecting their spread are only partially understood. For example, microbial symbionts can impact mosquito reproduction, survival, and vectorial capacity, and hence affect disease transmission. Nonetheless, current knowledge of mosquito‐associated microbial communities is limited. To characterize the bacterial and eukaryotic microbial communities of multiple vector species collected from different habitat types in disease endemic areas, we employed next‐generation 454 pyrosequencing of 16S and 18S rRNA amplicon libraries, also known as metabarcoding. We investigated pooled whole adult mosquitoes of three medically important vectors, Aedes aegypti, Ae. albopictus, and Culex quinquefasciatus, collected from different habitats across central Thailand where we previously characterized mosquito diversity. Our results indicate that diversity within the mosquito microbiota is low, with the majority of microbes assigned to one or a few taxa. Two of the most common eukaryotic and bacterial genera recovered (Ascogregarina and Wolbachia, respectively) are known mosquito endosymbionts with potentially parasitic and long evolutionary relationships with their hosts. Patterns of microbial composition and diversity appeared to differ by both vector species and habitat for a given species, although high variability between samples suggests a strong stochastic element to microbiota assembly. In general, our findings suggest that multiple factors, such as habitat condition and mosquito species identity, may influence overall microbial community composition, and thus provide a basis for further investigations into the interactions between vectors, their microbial communities, and human‐impacted landscapes that may ultimately affect vector‐borne disease risk. Current knowledge of mosquito‐associated microbial communities is limited; even though several studies have characterized mosquito bacterial microbiota in natural habitats, few have characterized eukaryotes. In this study, we employed next‐generation 454 pyrosequencing of 16s and 18s rRNA amplicon libraries to simultaneously describe both the bacterial and eukaryotic of pooled whole adult mosquitoes of three medically important vectors, Aedes aegypti, Ae. albopictus, and Culex quinquefasciatus, collected from different habitats across central Thailand. Our findings suggest that multiple factors, such as habitat condition and mosquito species identity, may influence overall microbial community composition, and thus add to the current knowledge of vector‐associated microbiota, especially the eukaryotes, to help reveal microbial species with the potential to control mosquito‐borne diseases, and to emphasize the need to understand how vector symbiotic microbial communities vary across habitats and may ultimately affect vector‐borne disease transmission.

Phlebotomine sand flies remain poorly studied in southeastern Peru, a region with a high burden of cutaneous leishmaniasis (CL). Using modified ultraviolet (UV) light traps, we surveyed sand fly assemblages at Manu Biological Station during the wet season within secondary forest, Guadua bamboo forest, fruit crop plots, and peridomicile habitats. We collected 2641 sand flies representing 32 species. Habitat type was the primary driver of assemblage composition, with minimum nightly temperature as the strongest environmental correlate. Sand fly abundance was highest in secondary forest (n = 921) and peridomicile habitats (n = 836), where assemblages were dominated by Nyssomyia shawi, a generalist species. Although Guadua bamboo forests harbored lower abundance (n = 386), potential vector species comprised 92% of the assemblage compared to 42–86% in other habitats, suggesting that expanding bamboo forests may favor a higher proportion of potential CL vectors. Peridomicile assemblages consisted largely of generalist species that overlapped with adjacent forested habitats, indicating potential pathways for sylvatic-to-peridomestic spillover. Although the study’s limited scope (i.e., limited to a single season and locality) does not allow broad generalization, our findings suggest the importance of habitat in structuring patterns of potential vector exposure.

We develop and analyse an ordinary differential equation model to investigate the transmission dynamics of releasing Wolbachia-infected mosquitoes to establish an endemic infection in a population of wild uninfected mosquitoes. Wolbachia is a genus of endosymbiotic bacteria that can infect mosquitoes and reduce their ability to transmit some viral mosquito-transmitted diseases, including dengue fever, chikungunya, and Zika. Although the bacterium is transmitted vertically from infected mothers to their offspring, it can be difficult to establish an endemic infection in a wild mosquito population. Our transmission model for the adult and aquatic-stage mosquitoes takes into account Wolbachia-induced fitness change and cytoplasmic incompatibility. We show that, for a wide range of realistic parameter values, the basic reproduction number, , is less than one. Hence, the epidemic will die out if only a few Wolbachia-infected mosquitoes are introduced into the wild population. Even though the basic reproduction number is less than one, an endemic Wolbachia infection can be established if a sufficient number of infected mosquitoes are released. This threshold effect is created by a backward bifurcation with three coexisting equilibria: a stable zero-infection equilibrium, an intermediate-infection unstable endemic equilibrium, and a high-infection stable endemic equilibrium. We analyse the impact of reducing the wild mosquito population before introducing the infected mosquitoes and observed that the most effective approach to establish the infection in the wild is based on reducing mosquitoes in both the adult and aquatic stages.

Urban greenspaces, including residential parks and conservation areas, provide ecological and recreational benefits. This study reports mosquito surveillance and blood meal analysis data from greenspaces in Vero Beach, Florida. It also compares mosquito assemblages and host associations across residential and conservation greenspaces to assess how greenspace type impacts mosquito abundance and host interactions. Using CO2-baited traps and large-diameter aspirators, mosquitoes were collected over 26 sampling weeks (February–December 2023) yielding over 19,000 female mosquitoes from 32 species. Although mosquito species richness and community composition were similar across greenspace types, relative abundance of some key vector and nuisance species differed significantly. For example, Aedes taeniorhynchus was more common in preserved coastal wetland greenspaces, while Aedes aegypti and Aedes albopictus were more common in residential greenspaces. Generalized linear models revealed the impacts of climatic variables on the abundance of many key mosquito species. Blood meal analyses showed that host associations did not vary significantly by greenspace type, suggesting stable mosquito–host interactions across the landscape. These results highlight that greenspaces are not uniform in their mosquito species composition. Further studies on the effects of different greenspace types on mosquito communities can help to identify urban landscape features that minimize mosquito-borne disease risk.

Background Dengue is a mosquito-borne viral disease posing a significant threat to public health. Dengue virus (DENV) evolution is often characterized by lineage turnover, which, along with ecological and immunological factors, has been linked to changes in dengue phenotype affecting epidemic dynamics. Utilizing epidemiologic and virologic data from long-term population-based studies (the Nicaraguan Pediatric Dengue Cohort Study and Nicaraguan Dengue Hospital-based Study), we describe a lineage turnover of DENV serotype 2 (DENV-2) prior to a large dengue epidemic in 2019. Prior to this epidemic, Nicaragua had experienced relatively low levels of DENV transmission from 2014 to 2019, a period dominated by chikungunya in 2014/15 and Zika in 2016. Results Our phylogenetic analyses confirmed that all Nicaraguan DENV-2 isolates from 2018 to 2019 formed their own clade within the Nicaraguan lineage of the Asian/American genotype. The emergence of the new DENV-2 lineage reflects a replacement of the formerly dominant clade presiding from 2005 to 2009, a lineage turnover marked by several shared derived amino acid substitutions throughout the genome. To elucidate evolutionary drivers of lineage turnover, we performed selection pressure analysis and reconstructed the demographic history of DENV-2. We found evidence of adaptive evolution by natural selection at the codon level as well as in branch formation. Conclusions The timing of its emergence, along with a statistical signal of adaptive evolution and distinctive amino acid substitutions, the latest in the NS5 gene, suggest that this lineage may have increased fitness relative to the prior dominant DENV-2 strains. This may have contributed to the intensity of the 2019 DENV-2 epidemic, in addition to previously identified immunological factors associated with pre-existing Zika virus immunity.

With ongoing global efforts to eliminate malaria, several countries have entered a pre-elimination stage, in which populations of the primary mosquito vector are reduced and the rates of malaria transmission are low. Efforts to eliminate malaria have changed the dynamics of disease transmission, causing a shift in anopheline community composition in some regions. One of the most abundant species of Anopheles found in pre-elimination areas, such as southern Africa, is Anopheles squamosus (Theobald, 1901; Diptera: Culicidae). Although An. squamosus has been documented across the African continent, limited information is available about its biology. Knowing what, when, and where the malaria vector bites humans can help develop effective malaria control strategies. The aim of this review is to compile the information available on An. squamosus’s biology, ecology, distribution, behavior, and potential role in disease transmission. The review of current literature suggested that An. squamosus is abundant throughout the African continent. Studies indicate that this species occupies the same range and exhibits similar behaviors to primary malaria vectors in southern and eastern African countries, like Zambia. In conclusion, An. squamosus continues to be an understudied species that has circumvented disease control measures and further studies are needed to develop effective control strategies.

Dengue virus infection, transmitted via mosquito bites, poses a substantial risk to global public health. Studies suggest that the mosquito's microbial community can profoundly influence vector-borne pathogen transmissions, including dengue virus. Ascogregarina culicis (Ross) of the phylum Apicomplexa is among the most common parasites of Aedes aegypti (Linnaeus), the principal vector of dengue. Despite a high prevalence worldwide, including in the areas where dengue is endemic, the impact of A. culicis on Ae. aegypti vector competence for dengue virus is unknown.This study aimed to investigate the effects of A. culicis infection on mosquito size and fitness, as measured by wing length, and the susceptibility to dengue virus infection in Ae. aegypti. Our results showed that there was no statistically significant difference in wing lengths between Ae. aegypti infected and not infected with A. culicis. Furthermore, A. culicis infection did not significantly affect dengue virus infection or disseminated infection rate. However, there was a significant association between shorter wings and higher dengue virus infection rate, whereby a 0.1-mm increase in wing length decreased the odds of the mosquito being infected by 32%.Thus, based on our result, A. culicis infection does not influence the body size and dengue virus infection in Ae. aegypti.This study helps to shed light on a common but neglected eukaryotic mosquito parasite.