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916 result(s) for "University of Toronto"
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Decades of Reconstruction : Postwar Societies, State-building, and International Relations from the Seven Years' War to the Cold War
\"As wars and other conflicts increase on a worldwide scale, the alleged 'new wars' of the present day have taught that military victory does not necessarily result in a sustained state of peace. Rather, societies in conflict experience a 'status mixtus' - a transformative period that includes substantial changes in economy, politics, society and culture. Focusing on these decades of reconstruction in Europe and North America, this book examines the transformation of state systems, international relations, and normative principles in international comparison. By putting the postwar decade after 1945 into a long-term historical perspective, the chapters illuminate new patterns of transition between war and peace from the eighteenth to the twentieth century. Experts in the field show that states and societies are never restituted from a 'zero hour'. They also demonstrate that foreign and domestic policy are intermixed before and after peace breaks out.\"--Back cover.
Ion channel profiling of the Lymnaea stagnalis ganglia via transcriptome analysis
Background The pond snail Lymnaea stagnalis (L. stagnalis) has been widely used as a model organism in neurobiology, ecotoxicology, and parasitology due to the relative simplicity of its central nervous system (CNS). However, its usefulness is restricted by a limited availability of transcriptome data. While sequence information for the L. stagnalis CNS transcripts has been obtained from EST libraries and a de novo RNA-seq assembly, the quality of these assemblies is limited by a combination of low coverage of EST libraries, the fragmented nature of de novo assemblies, and lack of reference genome. Results In this study, taking advantage of the recent availability of a preliminary L. stagnalis genome, we generated an RNA-seq library from the adult L. stagnalis CNS, using a combination of genome-guided and de novo assembly programs to identify 17,832 protein-coding L. stagnalis transcripts. We combined our library with existing resources to produce a transcript set with greater sequence length, completeness, and diversity than previously available ones. Using our assembly and functional domain analysis, we profiled L. stagnalis CNS transcripts encoding ion channels and ionotropic receptors, which are key proteins for CNS function, and compared their sequences to other vertebrate and invertebrate model organisms. Interestingly, L. stagnalis transcripts encoding numerous putative Ca 2+ channels showed the most sequence similarity to those of Mus musculus , Danio rerio , Xenopus tropicalis , Drosophila melanogaster , and Caenorhabditis elegans , suggesting that many calcium channel-related signaling pathways may be evolutionarily conserved. Conclusions Our study provides the most thorough characterization to date of the L. stagnalis transcriptome and provides insights into differences between vertebrates and invertebrates in CNS transcript diversity, according to function and protein class. Furthermore, this study provides a complete characterization of the ion channels of Lymnaea stagnalis , opening new avenues for future research on fundamental neurobiological processes in this model system.
A review of air-ice chemical and physical interactions (AICI): liquids, quasi-liquids, and solids in snow
Snow in the environment acts as a host to rich chemistry and provides a matrix for physical exchange of contaminants within the ecosystem. The goal of this review is to summarise the current state of knowledge of physical processes and chemical reactivity in surface snow with relevance to polar regions. It focuses on a description of impurities in distinct compartments present in surface snow, such as snow crystals, grain boundaries, crystal surfaces, and liquid parts. It emphasises the microscopic description of the ice surface and its link with the environment. Distinct differences between the disordered air-ice interface, often termed quasi-liquid layer, and a liquid phase are highlighted. The reactivity in these different compartments of surface snow is discussed using many experimental studies, simulations, and selected snow models from the molecular to the macro-scale. Although new experimental techniques have extended our knowledge of the surface properties of ice and their impact on some single reactions and processes, others occurring on, at or within snow grains remain unquantified. The presence of liquid or liquid-like compartments either due to the formation of brine or disorder at surfaces of snow crystals below the freezing point may strongly modify reaction rates. Therefore, future experiments should include a detailed characterisation of the surface properties of the ice matrices. A further point that remains largely unresolved is the distribution of impurities between the different domains of the condensed phase inside the snowpack, i.e. in the bulk solid, in liquid at the surface or trapped in confined pockets within or between grains, or at the surface. While surface-sensitive laboratory techniques may in the future help to resolve this point for equilibrium conditions, additional uncertainty for the environmental snowpack may be caused by the highly dynamic nature of the snowpack due to the fast metamorphism occurring under certain environmental conditions. Due to these gaps in knowledge the first snow chemistry models have attempted to reproduce certain processes like the long-term incorporation of volatile compounds in snow and firn or the release of reactive species from the snowpack. Although so far none of the models offers a coupled approach of physical and chemical processes or a detailed representation of the different compartments, they have successfully been used to reproduce some field experiments. A fully coupled snow chemistry and physics model remains to be developed.
The strength in numbers: comprehensive characterization of house dust using complementary mass spectrometric techniques
Untargeted analysis of a composite house dust sample has been performed as part of a collaborative effort to evaluate the progress in the field of suspect and nontarget screening and build an extensive database of organic indoor environment contaminants. Twenty-one participants reported results that were curated by the organizers of the collaborative trial. In total, nearly 2350 compounds were identified (18%) or tentatively identified (25% at confidence level 2 and 58% at confidence level 3), making the collaborative trial a success. However, a relatively small share (37%) of all compounds were reported by more than one participant, which shows that there is plenty of room for improvement in the field of suspect and nontarget screening. An even a smaller share (5%) of the total number of compounds were detected using both liquid chromatography–mass spectrometry (LC-MS) and gas chromatography–mass spectrometry (GC-MS). Thus, the two MS techniques are highly complementary. Most of the compounds were detected using LC with electrospray ionization (ESI) MS and comprehensive 2D GC (GC×GC) with atmospheric pressure chemical ionization (APCI) and electron ionization (EI), respectively. Collectively, the three techniques accounted for more than 75% of the reported compounds. Glycols, pharmaceuticals, pesticides, and various biogenic compounds dominated among the compounds reported by LC-MS participants, while hydrocarbons, hydrocarbon derivatives, and chlorinated paraffins and chlorinated biphenyls were primarily reported by GC-MS participants. Plastics additives, flavor and fragrances, and personal care products were reported by both LC-MS and GC-MS participants. It was concluded that the use of multiple analytical techniques was required for a comprehensive characterization of house dust contaminants. Further, several recommendations are given for improved suspect and nontarget screening of house dust and other indoor environment samples, including the use of open-source data processing tools. One of the tools allowed provisional identification of almost 500 compounds that had not been reported by participants.
Autoimmune Encephalitis: Insights Into Immune-Mediated Central Nervous System Injury
Autoimmune encephalitis (AE) is a category of immune-mediated disorders of the central nervous system (CNS) affecting children and adults. It is characterized by the subacute onset of altered mentation, neurocognitive issues, refractory seizures/drug-resistant epilepsy, movement disorders, and/or autonomic dysfunction. AE is mediated by autoantibodies targeting specific surface components or intracytoplasmic antigens in the CNS, leading to functional or structural alterations. Multiple triggers that induce autoimmunity have been described, which are mainly parainfectious and paraneoplastic. The imaging features of AE often overlap with each other and with other common causes of encephalitis/encephalopathy (infections and toxic-metabolic etiologies). Limbic encephalitis is the most common imaging finding shared by most of these entities. Cortical, basal ganglia, diencephalon, and brainstem involvement may also be present. Cerebellar involvement is rare and is often a part of paraneoplastic degeneration. Owing to an improved understanding of AE, their incidence and detection have increased. Hence, in an appropriate setting, a high degree of suspicion is crucial when reporting clinical MRIs to ensure prompt treatment and better patient outcomes. In this review, we discuss the pathophysiology of AE and common etiologies encountered in clinical practice.
Ficus insipida tree rings as biomonitors for gaseous elemental mercury in the artisanal gold mining-impacted Peruvian Amazon
IntroductionThe primary source of anthropogenic atmospheric mercury (Hg) emissions globally is artisanal and small-scale gold mining (ASGM). Estimates of Hg emissions from ASGM are poorly constrained due to a lack of monitoring data and the informal, generally unregulated nature of this industry. Trees accumulate atmospheric gaseous elemental mercury (GEM) in bolewood following stomatal uptake and thus have the potential to be used as biomonitors to quantify the spatial and temporal footprint of Hg emissions from ASGM.MethodsWe collected tree cores from Ficus insipida at three mining-impacted and two remote, unimpacted sites in the Peruvian Amazon (n = 4 trees per site).ResultsWe show that tree ring Hg concentrations were higher near ASGM activity located near mining towns (6.0 ng g−1) compared to remote sites (0.9 ng g−1) and recent tree rings were strongly linearly correlated with atmospheric GEM concentrations across all sites (p < 0.0001, r2 = 0.64), especially in the dry season when there is enhanced ASGM activity (p < 0.0001, r2 = 0.76), highlighting the potential for tree rings to be used as biomonitors for GEM. At the most impacted sites, tree-ring Hg increased over time in response to intensification of ASGM.DiscussionThus far, applications of dendrochemistry to quantify Hg pollution have been largely restricted to coniferous species in temperate regions, but this study shows that tropical species also quantify Hg pollution. We conclude that Ficus insipida is a suitable biomonitor and powerful tool for characterizing the spatial, and potentially temporal footprint of GEM emissions from ASGM in the neotropics.
Exploring the Potential of Broadband Complementary Metal Oxide Semiconductor Micro-Coil Nuclear Magnetic Resonance for Environmental Research
With sensitivity being the Achilles’ heel of nuclear magnetic resonance (NMR), the superior mass sensitivity offered by micro-coils can be an excellent choice for tiny, mass limited samples such as eggs and small organisms. Recently, complementary metal oxide semiconductor (CMOS)-based micro-coil transceivers have been reported and demonstrate excellent mass sensitivity. However, the ability of broadband CMOS micro-coils to study heteronuclei has yet to be investigated, and here their potential is explored within the lens of environmental research. Eleven nuclei including 7Li, 19F, 31P and, 205Tl were studied and detection limits in the low to mid picomole range were found for an extended experiment. Further, two environmentally relevant samples (a sprouting broccoli seed and a D. magna egg) were successfully studied using the CMOS micro-coil system. 13C NMR was used to help resolve broad signals in the 1H spectrum of the 13C enriched broccoli seed, and steady state free precession was used to improve the signal-to-noise ratio by a factor of six. 19F NMR was used to track fluorinated contaminants in a single D. magna egg, showing potential for studying egg–pollutant interactions. Overall, CMOS micro-coil NMR demonstrates significant promise in environmental research, especially when the future potential to scale to multiple coil arrays (greatly improving throughput) is considered.
Parental legacy, demography, and admixture influenced the evolution of the two subgenomes of the tetraploid Capsella bursa-pastoris (Brassicaceae)
Allopolyploidy is generally perceived as a major source of evolutionary novelties and as an instantaneous way to create isolation barriers. However, we do not have a clear understanding of how two subgenomes evolve and interact once they have fused in an allopolyploid species nor how isolated they are from their relatives. Here, we address these questions by analyzing genomic and transcriptomic data of allotetraploid Capsella bursa-pastoris in three differentiated populations, Asia, Europe, and the Middle East. We phased the two subge-nomes, one descended from the outcrossing and highly diverse Capsella grandiflora (Cbp Cg) and the other one from the selfing and genetically depauperate Capsella orientalis (Cbp Co). For each subgenome, we assessed its relationship with the diploid relatives, temporal changes of effective population size (N e), signatures of positive and negative selection , and gene expression patterns. In all three regions, N e of the two subgenomes decreased gradually over time and the Cbp Co subgenome accumulated more deleterious changes than Cbp Cg. There were signs of widespread admixture between C. bursa-pastoris and its diploid relatives. The two subgenomes were impacted differentially depending on geographic region suggesting either strong interploidy gene flow or multiple origins of C. bursa-pastoris. Selective sweeps were more common on the Cbp Cg subgenome in Europe and the Middle East, and on the Cbp Co subgenome in Asia. In contrast, differences in expression were limited with the Cbp Cg subgenome slightly more expressed than Cbp Co in Europe and the Middle-East. In summary, after more than 100,000 generations of co-existence , the two subgenomes of C. bursa-pastoris still retained a strong signature of parental legacy but their evolutionary trajectory strongly varied across geographic regions.