Catalogue Search | MBRL
Search Results Heading
Explore the vast range of titles available.
MBRLSearchResults
-
DisciplineDiscipline
-
Is Peer ReviewedIs Peer Reviewed
-
Item TypeItem Type
-
SubjectSubject
-
YearFrom:-To:
-
More FiltersMore FiltersSourceLanguage
Done
Filters
Reset
49
result(s) for
"Vesterinen, Eero J."
Sort by:
Next Generation Sequencing of Fecal DNA Reveals the Dietary Diversity of the Widespread Insectivorous Predator Daubenton’s Bat (Myotis daubentonii) in Southwestern Finland
by
Laine, Veronika N.
,
Vesterinen, Eero J.
,
Lilley, Thomas
in
Animal behavior
,
Animals
,
Aquatic insects
2013
Understanding predator-prey dynamics is a fundamental task in the evaluation of the adaptive capacities of species. However, direct observations or morphological identification of fecal remains do not offer an effective way to study the dietary ecology of elusive species, such as nocturnal insectivorous bats. However, recent advances in molecular techniques have opened a new method for identifying prey species from fecal samples. In this study, we amplified species-specific mitochondrial COI fragments from fecal DNA extractions from 34 individual Daubenton's bats (Myotis daubentonii) collected between 2008 and 2010 from southwestern Finland. Altogether, 128 different species of prey were identified based on a comprehensive local DNA reference library. In our study area, Daubenton's bats feed most frequently on insects of the orders Diptera (found in the diet of 94% individuals), Trichoptera (69%) and Lepidoptera (63%). The most frequent dipteran family in the diet was Chironomidae, which was found in 31 of 34 individuals. Most common prey species were chironomids Microtendipes pedellus (found in 50% of bats), Glyptotendipes cauliginellus (44%), and Procladius ferrugineus (41%). For the first time, an accurate species level list of the diet of the insectivorous Daubenton's bat (Myotis daubentonii) in Finland is presented. We report a generally applicable method for describing the arthropod diet of vertebrate predators. We compare public databases to a national database to highlight the importance of a local reference database.
Journal Article
Honeybees’ foraging choices for nectar and pollen revealed by DNA metabarcoding
by
Pferschy-Wenzig, Eva-Maria
,
Wirta, Helena
,
Vesterinen, Eero J.
in
631/158
,
631/158/2452
,
631/158/2456
2023
Honeybees are the most widespread managed pollinators of our food crops, and a crucial part of their well-being is a suitable diet. Yet, we do not know how they choose flowers to collect nectar or pollen from. Here we studied forty-three honeybee colonies in six apiaries over a summer, identifying the floral origins of honey and hive-stored pollen samples by DNA-metabarcoding. We recorded the available flowering plants and analyzed the specialized metabolites in honey. Overall, we find that honeybees use mostly the same plants for both nectar and pollen, yet per colony less than half of the plant genera are used for both nectar and pollen at a time. Across samples, on average fewer plant genera were used for pollen, but the composition was more variable among samples, suggesting higher selectivity for pollen sources. Of the available flowering plants, honeybees used only a fraction for either nectar or pollen foraging. The time of summer guided the plant choices the most, and the location impacted both the plants selected and the specialized metabolite composition in honey. Thus, honeybees are selective for both nectar and pollen, implicating a need of a wide variety of floral resources to choose an optimal diet from.
Journal Article
Ticks (Acari: Ixodidae) parasitizing migrating and local breeding birds in Finland
2022
Ticks are globally renowned vectors for numerous zoonoses, and birds have been identified as important hosts for several species of hard ticks (Acari: Ixodidae) and tick-borne pathogens. Many European bird species overwinter in Africa and Western Asia, consequently migrating back to breeding grounds in Europe in the spring. During these spring migrations, birds may transport exotic tick species (and associated pathogens) to areas outside their typical distribution ranges. In Finland, very few studies have been conducted regarding ticks parasitizing migrating or local birds, and existing data are outdated, likely not reflecting the current situation. Consequently, in 2018, we asked volunteer bird ringers to collect ticks from migrating and local birds, to update current knowledge on ticks found parasitizing birds in Finland. In total 430 ticks were collected from 193 birds belonging to 32 species, caught for ringing between 2018 and 2020. Furthermore, four Ixodes uriae were collected from two roosting islets of sea birds in 2016 and 2020. Ticks collected on birds consisted of: Ixodes ricinus (n = 421), Ixodes arboricola (4), Ixodes lividus (2) and Hyalomma marginatum (3). Ixodes ricinus loads (nymphs and larvae) were highest on thrushes (Passeriformes: Turdidae) and European robins (Erithacus rubecula). The only clearly imported exotic tick species was H. marginatum. This study forms the second report of both I. uriae and I. arboricola from Finland, and possibly the northernmost observation of I. arboricola from Europe. The importation of exotic tick species by migrating birds seems a rare occurrence, as over 97% of all ticks collected from birds arriving in Finland during their spring migrations were I. ricinus, a species native to and abundant in Finland.
Journal Article
Crowdsourced tick observation data from across 60 years reveals major increases and northwards shifts in tick contact areas in Finland
2023
There is mounting evidence of increases in tick (Acari: Ixodidae) contacts in Finland during the past few decades, highlighted by increases in the incidence of Lyme borreliosis and tick-borne encephalitis (TBE). While nationwide field studies to map distributions of ticks are not feasible, crowdsourcing provides a comprehensive method with which to assess large-scale changes in tick contact areas. Here, we assess changes in tick contact areas in Finland between 1958 and 2021 using three different nationwide crowdsourced data sets. The data revealed vast increases in tick contact areas, with ticks estimated to be contacted locally approximately 400 km further north in western and approximately 100 km further north in eastern Finland in 2021 than 1958. Tick contact rates appeared to be highest along the coastline and on the shores of large lakes, possibly indicating higher tick abundance therein. In general, tick observations per inhabitant increased from 2015 to 2021. Tick contact areas have expanded in Finland over the past 60 years. It appears that taiga ticks (
Ixodes persulcatus
) are behind most of the northwards shifts in tick contact areas, with
Ixodes ricinus
contributing mostly to new contact areas in the south. While ticks are now present in most of Finland, there are still areas where tick abundance is low and/or establishment not possible, mainly in northern Finland.
Journal Article
Root, Nodule and Soil Bacterial Communities Associated With the Invasive Nitrogen‐Fixing Lupinus polyphyllus
by
Vesterinen, Eero J.
,
Mousavi, Seyed Abdollah
,
Ramula, Satu
in
Bacteria
,
Biological invasions
,
Chemistry
2024
ABSTRACT
Plants host microorganisms that can facilitate their success in becoming invasive. Established plant invasions might thus provide useful insights into potential changes in plant‐associated microbiomes over the course of the invasion process. Here, we investigated the endophytic bacterial communities of the invasive herbaceous legume Lupinus polyphyllus, which is able to form mutualistic associations with N‐fixing bacteria. More specifically, we examined the alpha diversity (observed bacterial taxa richness and Shannon diversity) and composition of bacterial communities in roots and nodules sampled from core and edge locations within 10 established invasion sites (> 10 years old) in southwestern Finland. Moreover, we compared the alpha diversity and structure of bacterial communities in the rhizosphere and bulk soil between core and edge locations within these invasion sites. We found that roots and nodules had distinctive endophytic bacterial communities, with roots having 24% higher bacterial alpha diversity (Shannon diversity) than nodules. In nodules, the dominant bacteria were assigned to the family Bradyrhizobiaceae, which includes N‐fixing bacteria. Soil bacterial communities, instead, were shaped by soil type, with bulk soil hosting up to 27% higher alpha diversity (richness and Shannon diversity) than rhizosphere soil; however, there was no apparent difference in their community composition. Soil bacterial communities were only weakly associated with soil chemistry. Endophytic and soil bacterial communities did not differ between core and edge locations within the established invasions. Our findings suggest that L. polyphyllus may not induce dramatic changes in the bacterial communities with which it associates over the course of the local invasion process.
We found that roots and nodules of the invasive herb Lupinus polyphyllus had distinctive endophytic bacterial communities, but endophytic and soil bacterial communities did not differ between core and edge locations within the established invasions. Our findings suggest that L. polyphyllus may not induce dramatic changes in the bacterial communities with which it associates over the course of the local invasion process.
Journal Article
A global class reunion with multiple groups feasting on the declining insect smorgasbord
2020
We report a detection of a surprising similarity in the diet of predators across distant phyla. Though just a first glimpse into the subject, our discovery contradicts traditional aspects of biology, as the earliest notions in ecology have linked the most severe competition of resources with evolutionary relatedness. We argue that our finding deserves more research, and propose a plan to reveal more information on the current biodiversity loss around the world. While doing so, we expand the recently proposed conservation roadmaps into a parallel study of global interaction networks.
Journal Article
Large‐scale long‐term passive‐acoustic monitoring reveals spatio‐temporal activity patterns of boreal bats
by
Ylönen, Jari
,
Aspi, Jouni
,
Solbakken, Jostein
in
acoustic monitoring
,
Acoustic tracking
,
Acoustics
2023
The distribution ranges and spatio‐temporal patterns in the occurrence and activity of boreal bats are yet largely unknown due to their cryptic lifestyle and lack of suitable and efficient study methods. We approached the issue by establishing a permanent passive‐acoustic sampling setup spanning the area of Finland to gain an understanding on how latitude affects bat species composition and activity patterns in northern Europe. The recorded bat calls were semi‐automatically identified for three target taxa; Myotis spp., Eptesicus nilssonii or Pipistrellus nathusii and the seasonal activity patterns were modeled for each taxa across the seven sampling years (2015–2021). We found an increase in activity since 2015 for E. nilssonii and Myotis spp. For E. nilssonii and Myotis spp. we found significant latitude ‐dependent seasonal activity patterns, where seasonal variation in patterns appeared stronger in the north. Over the years, activity of P. nathusii increased during activity peak in June and late season but decreased in mid season. We found the passive‐acoustic monitoring network to be an effective and cost‐efficient method for gathering bat activity data to analyze spatio‐temporal patterns. Long‐term data on the composition and dynamics of bat communities facilitates better estimates of abundances and population trend directions for conservation purposes and predicting the effects of climate change.
Journal Article
Pellets of proof: First glimpse of the dietary composition of adult odonates as revealed by metabarcoding of feces
by
Vesterinen, Eero J.
,
Kaunisto, Kari M.
,
Sääksjärvi, Ilari E.
in
cytochrome oxidase subunit I
,
damselfly
,
Deoxyribonucleic acid
2017
Recent advances in molecular techniques allow us to resolve the diet of unstudied taxa. Odonates are potentially important top‐down regulators of many insects. Yet, to date, our knowledge of odonate prey use is based mainly on limited observations of odonates catching or eating their prey. In this study, we examine the potential use of metabarcoding in establishing the diet of three adult odonate species (Lestes sponsa, Enallagma cyathigerum, and Sympetrum danae) at a site in southwestern Finland. To this purpose, we compared three different methods for extracting DNA from fecal samples: the Macherey‐Nagel Nucleospin XS kit, a traditional salt extraction, and the Zymo Research Fecal Microprep kit. From these extracts, we amplified group‐specific mitochondrial markers (COI and 16S rRNA) from altogether 72 odonate individuals, and compared them to comprehensive reference libraries. The three odonate species show major overlap in diet, with no significant differences between individuals of different size and/or gender, reflecting opportunistic foraging of adult odonates. Of a total of 41 different prey species detected, the most frequently consumed ones were Diptera, with additional records of six other orders. Based on our data, the best DNA extraction method is the traditional salt extraction, as it provides the most information on prey content while also being the most economical. To our knowledge, this is the first study to resolve the species‐level diet of adult odonates. Armed with the appropriate methodological caveats, we are ready to examine the ecological role of odonates in both terrestrial and aquatic food webs, and in transferring subsidies between these two realms.
This is the first study to shed light on the species‐level diet of adult odonates. Drawing on molecular tools, we find that Odonata diet shows extensive overlap with previous records of bat diet and tentative records of bird diet, thus revealing major overlap in prey choice by dominant vertebrate groups. Based on the current study, we recommend using a traditional salt‐based method for the extraction and purification of odonate fecal DNA.
Journal Article
From feces to data: A metabarcoding method for analyzing consumed and available prey in a bird‐insect food web
2019
Diets play a key role in understanding trophic interactions. Knowing the actual structure of food webs contributes greatly to our understanding of biodiversity and ecosystem functioning. The research of prey preferences of different predators requires knowledge not only of the prey consumed, but also of what is available. In this study, we applied DNA metabarcoding to analyze the diet of 4 bird species (willow tits Poecile montanus, Siberian tits Poecile cinctus, great tits Parus major and blue tits Cyanistes caeruleus) by using the feces of nestlings. The availability of their assumed prey (Lepidoptera) was determined from feces of larvae (frass) collected from the main foraging habitat, birch (Betula spp.) canopy. We identified 53 prey species from the nestling feces, of which 11 (21%) were also detected from the frass samples (eight lepidopterans). Approximately 80% of identified prey species in the nestling feces represented lepidopterans, which is in line with the earlier studies on the parids' diet. A subsequent laboratory experiment showed a threshold for fecal sample size and the barcoding success, suggesting that the smallest frass samples do not contain enough larval DNA to be detected by high‐throughput sequencing. To summarize, we apply metabarcoding for the first time in a combined approach to identify available prey (through frass) and consumed prey (via nestling feces), expanding the scope and precision for future dietary studies on insectivorous birds.
We apply DNA metabarcoding for the first time in a combined approach, analyzing feces from both arthropods and their avian predators to identify available and consumed prey. Using our methods, often species‐specific identifications were obtained from our samples, expanding the scope and precision for dietary studies on insectivorous birds.
Journal Article
Tick-borne pathogens in Finland: comparison of Ixodes ricinus and I. persulcatus in sympatric and parapatric areas
by
Laaksonen, Maija
,
Puisto, Anna
,
Vesterinen, Eero J.
in
Anaplasma
,
Animals
,
Arachnid Vectors - microbiology
2018
Background
Almost 3500 tick samples, originally collected
via
a nationwide citizen science campaign in 2015, were screened to reveal the prevalence and distribution of a wide spectrum of established and putative tick-borne pathogens vectored by
Ixodes ricinus
and
I. persulcatus
in Finland. The unique geographical distribution of these two tick species in Finland allowed us to compare pathogen occurrence between an
I. ricinus-
dominated area (southern Finland), an
I. persulcatus-
dominated area (northern Finland), and a sympatric area (central Finland).
Results
Of the analysed ticks, almost 30% carried at least one pathogen and 2% carried more than one pathogen. A higher overall prevalence of tick-borne pathogens was observed in
I. ricinus
than in
I. persulcatus
: 30.0% (604/2014)
versus
24.0% (348/1451), respectively. In addition,
I. ricinus
were more frequently co-infected than
I. persulcatus
: 2.4% (49/2014)
versus
0.8% (12/1451), respectively. Causative agents of Lyme borreliosis, i.e. bacterial genospecies in
Borrelia burgdorferi
(
sensu lato
) group, were the most prevalent pathogens (overall 17%). “
Candidatus
Rickettsia tarasevichiae” was found for the first time in
I. ricinus
ticks and in Finnish ticks in general. Moreover,
Babesia divergens
,
B. venatorum
and “
Candidatus
Neoehrlichia mikurensis” were reported for the first time from the Finnish mainland.
Conclusions
The present study provides valuable information on the prevalence and geographical distribution of various tick-borne pathogens in
I. ricinus
and
I. persulcatus
ticks in Finland. Moreover, this comprehensive subset of ticks revealed the presence of rare and potentially dangerous pathogens. The highest prevalence of infected ticks was in the
I. ricinus
-dominated area in southern Finland, while the prevalence was essentially equal in sympatric and
I. persulcatus-
dominated areas. However, the highest infection rates for both species were in areas of their dominance, either in south or north Finland.
Journal Article