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result(s) for
"Vladimir, Klemo"
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Epigenetics insights from perceived facial aging
2023
Facial aging is the most visible manifestation of aging. People desire to look younger than others of the same chronological age. Hence, perceived age is often used as a visible marker of aging, while biological age, often estimated by methylation markers, is used as an objective measure of age. Multiple epigenetics-based clocks have been developed for accurate estimation of general biological age and the age of specific organs, including the skin. However, it is not clear whether the epigenetic biomarkers (CpGs) used in these clocks are drivers of aging processes or consequences of aging. In this proof-of-concept study, we integrate data from GWAS on perceived facial aging and EWAS on CpGs measured in blood. By running EW Mendelian randomization, we identify hundreds of putative CpGs that are potentially causal to perceived facial aging with similar numbers of damaging markers that causally drive or accelerate facial aging and protective methylation markers that causally slow down or protect from aging. We further demonstrate that while candidate causal CpGs have little overlap with known epigenetics-based clocks, they affect genes or proteins with known functions in skin aging, such as skin pigmentation, elastin, and collagen levels. Overall, our results suggest that blood methylation markers reflect facial aging processes, and thus can be used to quantify skin aging and develop anti-aging solutions that target the root causes of aging.
Journal Article
Polygenic Risk Score and Risk Factors for Gestational Diabetes
2022
Gestational diabetes mellitus (GDM) is a common complication of pregnancy that adversely affects maternal and offspring health. A variety of risk factors, such as BMI and age, have been associated with increased risks of gestational diabetes. However, in many cases, gestational diabetes occurs in healthy nulliparous women with no obvious risk factors. Emerging data suggest that the tendency to develop gestational diabetes has genetic and environmental components. Here we develop a polygenic risk score for GDM and investigate relationships between its genetic architecture and genetically constructed risk factors and biomarkers. Our results demonstrate that the polygenic risk score can be used as an early screening tool that identifies women at higher risk of GDM before its onset allowing comprehensive monitoring and preventative programs to mitigate the risks.
Journal Article
Polygenic Risk Score and Risk Factors for Preeclampsia and Gestational Hypertension
by
Mostashari, Ali
,
Perišić, Marija Majda
,
Karpov, Sarah
in
Biobanks
,
Blood pressure
,
Body mass index
2022
Preeclampsia and gestational hypertensive disorders (GHD) are common complications of pregnancy that adversely affect maternal and offspring health, often with long-term consequences. High BMI, advanced age, and pre-existing conditions are known risk factors for GHD. Yet, assessing a woman’s risk of GHD based on only these characteristics needs to be reevaluated in order to identify at-risk women, facilitate early diagnosis, and implement lifestyle recommendations. This study demonstrates that a risk score developed with machine learning from the case-control genetics dataset can be used as an early screening test for GHD. We further confirm BMI as a risk factor for GHD and investigate a relationship between GHD and genetically constructed anthropometric measures and biomarkers. Our results show that polygenic risk score can be used as an early screening tool that, together with other known risk factors and medical history, would assist in identifying women at higher risk of GHD before its onset to enable stratification of patients into low-risk and high-risk groups for monitoring and preventative programs to mitigate the risks.
Journal Article
Application of social game context to teaching mutual exclusion
by
Šilić, Marin
,
Popović, Miroslav
,
Vladimir, Klemo
in
C (programming language)
,
Computer architecture
,
concurrency
2018
Mutual exclusion mechanisms, like semaphore and monitor, are fundamental tools used by software engineers to solve the race condition problem, ensure barrier, and achieve other workflow patterns. Introductory teachings on how parallel and concurrent processes compete over shared resources have the underlying working principles of the operating system and computer architecture as a starting point for learning the mutual exclusion concepts. Conventional teaching method focuses on lectures and solving race condition problem with counting semaphore in C programming language. Before applying conventional teaching method, we advocate the introduction of a social game scenario in teaching basic concepts of workers concurrently competing over a shared resource. We also introduce a simplified mutual exclusion assignment in which the implementation complexity is reduced by application of a specially designed graphical mechanism for mutual exclusion. Compared to a conventional method, the proposed experimental teaching method has a 15% higher success rate in solving race condition problem in C programming language. Regardless of additional steps introduced to make students familiar with the concepts of mutual exclusion, the experimental method is slightly advantageous when median time-on-task results are compared.
Journal Article
Epigenetics Insights from Perceived Facial Aging
2023
Facial aging is the most visible manifestation of aging. People desire to look younger than others of the same chronological age. Hence, perceived age is often used as a visible marker of aging, while biological age, often estimated by methylation markers, is used as an objective measure of age. Multiple epigenetics-based clocks have been developed for accurate estimation of general biological age and the age of specific organs, including the skin. However, it is not clear whether the epigenetic biomarkers (CpGs) used in these clocks are drivers of aging processes or consequences of aging.
In this proof-of-concept study, we integrate data from GWAS on perceived facial aging, and EWAS on CpGs measured in blood. By running EW Mendelian randomization, we identify hundreds of putative CpGs that are potentially causal to perceived facial aging with similar numbers of damaging markers that causally drive or accelerate facial aging and protective methylation markers that causally slow down or protect from aging. We further demonstrate that while candidate causal CpGs have little overlap with known epigenetics-based clocks, they affect genes or proteins with known functions in skin aging such as skin pigmentation, elastin, and collagen levels. Overall, our results suggest that blood methylation markers reflect facial aging processes, and thus can be used to quantify skin aging and develop anti-aging solutions that target the root causes of aging.