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result(s) for
"Watanabe, Shinji"
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Magnetic dynamics and nonreciprocal excitation in uniform hedgehog order in icosahedral 1/1 approximant crystal
2023
The hedgehog state in the icosahedral quasicrystal (QC) has attracted great interest as the theoretical discovery of topological magnetic texture in aperiodic systems. The revealed magnetic dynamics exhibits nonreciprocal excitation in the vast extent of the reciprocal lattice
q
-energy
ω
space, whose emergence mechanism remains unresolved. Here, we analyze the dynamical as well as static structure of the hedgehog order in the 1/1 approximant crystal (AC) composed of the cubic lattice with spatial inversion symmetry. We find that the dispersion of the magnetic excitation energy exhibits nonreciprocal feature along the N-P-
Γ
line in the
q
space. The dynamical structure factor exhibits highly structured intensities where high intensities appear in the high-energy branches along the
Γ
-H line and the P-
Γ
-N line in the
q
space. The nonreciprocity in the 1/1 AC and also in the QC is understood to be ascribed to inversion symmetry breaking by the hedgehog ordering. The sharp contrast on the emergence regime of nonreciprocal magnetic excitation between the QC and the 1/1 AC indicates that the emergence in the vast
q
-
ω
regime in the QC is attributed to the QC lattice structure.
Journal Article
Magnetism and topology in Tb-based icosahedral quasicrystal
2021
Quasicrystal (QC) possesses a unique lattice structure with rotational symmetry forbidden in conventional crystals. The electric property is far from complete understanding and it has been a long-standing issue whether the magnetic long-range order is realized in the QC. The main difficulty was lack of microscopic theory to analyze the effect of the crystalline electric field (CEF) at the rare-earth atom in QCs. Here we show the full microscopic analysis of the CEF in Tb-based QCs. We find that magnetic anisotropy arising from the CEF plays a key role in realizing unique magnetic textures on the icosahedron whose vertices Tb atoms are located at. Our analysis of the minimal model based on the magnetic anisotropy suggests that the long-range order of the hedgehog characterized by the topological charge of one is stabilized in the Tb-based QC. We also find that the whirling-moment state is characterized by unusually large topological charge of three. The magnetic textures as well as the topological states are shown to be switched by controlling compositions of the non-rare-earth elements in the ternary compounds. Our model is useful to understand the magnetism as well as the topological property in the rare-earth-based QCs and approximant crystals.
Journal Article
Efficacy of Antiviral Agents against Omicron Subvariants BQ.1.1 and XBB
by
Uraki, Ryuta
,
Suzuki, Tadaki
,
Watanabe, Shinji
in
Antiviral agents
,
Antiviral Agents - pharmacology
,
Antiviral Agents - therapeutic use
2023
Neither bebtelovimab nor any mAb combinations tested neutralized the SARS-CoV-2 omicron subvariants BQ.1.1 and XBB, but remdesivir, molnupiravir, and nirmatrelvir were efficacious against both in vitro.
Journal Article
Efficacy of Antibodies and Antiviral Drugs against Omicron BA.2.12.1, BA.4, and BA.5 Subvariants
by
Takashita, Emi
,
Suzuki, Tadaki
,
Watanabe, Shinji
in
Antibodies, Monoclonal - therapeutic use
,
Antibodies, Neutralizing - therapeutic use
,
Antibodies, Viral - immunology
2022
In Vitro Activity of Antibodies and Drugs against OmicronIn this study, investigators who were evaluating in vitro neutralization of omicron subvariants by monoclonal antibodies and antiviral drugs found considerable variation among the agents.
Journal Article
Efficacy of Antiviral Agents against the SARS-CoV-2 Omicron Subvariant BA.2
by
Takashita, Emi
,
Takeda, Makoto
,
Watanabe, Shinji
in
Antiviral agents
,
Antiviral Agents - pharmacology
,
Antiviral Agents - therapeutic use
2022
The in vitro activity of monoclonal antibodies and antiviral agents was assessed against the sublineages of the SARS-CoV-2 variant of concern omicron (BA.1, BA.1.1, and BA.2). Variable activity of the monoclonal antibodies was observed.
Journal Article
Efficacy of Antibodies and Antiviral Drugs against Covid-19 Omicron Variant
by
Takashita, Emi
,
Yotsuyanagi, Hiroshi
,
Adachi, Eisuke
in
Antibodies, Monoclonal - pharmacology
,
Antibodies, Monoclonal - therapeutic use
,
Antiviral activity
2022
Investigators assessed the in vitro activities of seven monoclonal antibodies and three antiviral drugs against Covid-19 variants of concern. All the antibodies showed either no or weak neutralizing activity against the omicron variant; two agents that target the RNA polymerase and a protease inhibitor were effective at omicron neutralization.
Journal Article
Magnetic dynamics of ferromagnetic long range order in icosahedral quasicrystal
2022
Quasicrystals lack translational symmetry and have unique lattice structures with rotational symmetry forbidden in periodic crystals. The electric state and physical property are far from complete understanding, which are the frontiers of modern matter physics. Recent discovery of the ferromagnetic long-range order in the rare-earth based icosahedral quasicrystal has made the breakthrough. Here, we first reveal the dynamical as well as static magnetic structure in the ferromagnetic long-range order in the terbium-based quasicrystal. The dynamical structure factor exhibits highly structured energy and wavenumber dependences beyond the crystalline-electric-field excitation. We find the presence of the magnetic excitation mode analog to magnon with unique hierarchical structure as well as the localized magnetic excitation with high degeneracy in the quasicrystal. Non-collinear and non-coplanar magnetic structure on the icosahedron is discovered to give rise to non-reciprocal magnetic excitation in the quasicrystal as well as non-reciprocal magnon in the periodic cubic 1/1 approximant. These findings afford illuminating insight into the magnetic dynamics in the broad range of the rare-earth-based quasicrystals and approximants.
Journal Article
Magnetic dynamics of hedgehog in icosahedral quasicrystal
2022
Quasicrystals (QCs) possess a unique lattice structure without translational invariance, which is characterized by the rotational symmetry forbidden in periodic crystals such as the 5-fold rotation. Recent discovery of the ferromagnetic (FM) long-range order in the terbium-based QC has brought about breakthrough but the magnetic structure and dynamics remain unresolved. Here, we reveal the dynamical as well as static structure of the FM hedgehog state in the icosahedral QC. The FM hedgehog is shown to be characterized by the triple-
Q
state in the reciprocal-lattice
q
space. Dynamical structure factor is shown to exhibit highly structured
q
and energy dependences. We find a unique magnetic excitation mode along the 5-fold direction exhibiting the streak fine structure in the
q
-energy plane, which is characteristic of the hedgehog in the icosahedral QC. Non-reciprocal magnetic excitations are shown to arise from the FM hedgehog order, which emerge in the vast extent of the
q
-energy plane.
Journal Article
Experimental adaptation of an influenza H5 HA confers respiratory droplet transmission to a reassortant H5 HA/H1N1 virus in ferrets
by
Maher, Eileen A.
,
Kawakami, Eiryo
,
Watanabe, Shinji
in
631/326/596/2563
,
692/308
,
692/699/255/1578
2012
Only four mutations in H5N1 HA are required to enable ferret-to-ferret transmission of a reassortant virus containing the H5 HA and the remaining seven gene segments from a human pandemic H1N1 influenza virus.
Elements involved in H5N1 transmission
Whether avian H5N1 viruses can gain the ability to transmit between humans was uncertain. The viral haemagglutinin protein (HA) mediates virus binding to host-specific cellular receptors, but previous studies have shown that alterations in HA that enable binding to human-type receptors are not sufficient to enable respiratory droplet transmission of H5N1 viruses in ferrets, the best animal model for human-to-human transmission. Imai
et al
. show that only four mutations in H5N1 HA are required to enable ferret-to-ferret transmission of a reassortant virus containing H5 HA, with the remaining genes from human pandemic H1N1 influenza virus. It is probable that further adaptations in other avian virus genes would be required to mediate transmission of wholly avian H5N1 in mammals, but human H1N1 and H5N1 viruses are genetically compatible and the emergence of H5-HA-containing viruses might be expected to cause a pandemic because humans lack immunity to H5 viruses. Knowledge of the mutations involved in adapting H5 HA to mammalian transmission could help with surveillance and monitoring of H5N1 viruses adapting towards pandemic potential.
Highly pathogenic avian H5N1 influenza A viruses occasionally infect humans, but currently do not transmit efficiently among humans. The viral haemagglutinin (HA) protein is a known host-range determinant as it mediates virus binding to host-specific cellular receptors
1
,
2
,
3
. Here we assess the molecular changes in HA that would allow a virus possessing subtype H5 HA to be transmissible among mammals. We identified a reassortant H5 HA/H1N1 virus—comprising H5 HA (from an H5N1 virus) with four mutations and the remaining seven gene segments from a 2009 pandemic H1N1 virus—that was capable of droplet transmission in a ferret model. The transmissible H5 reassortant virus preferentially recognized human-type receptors, replicated efficiently in ferrets, caused lung lesions and weight loss, but was not highly pathogenic and did not cause mortality. These results indicate that H5 HA can convert to an HA that supports efficient viral transmission in mammals; however, we do not know whether the four mutations in the H5 HA identified here would render a wholly avian H5N1 virus transmissible. The genetic origin of the remaining seven viral gene segments may also critically contribute to transmissibility in mammals. Nevertheless, as H5N1 viruses continue to evolve and infect humans, receptor-binding variants of H5N1 viruses with pandemic potential, including avian–human reassortant viruses as tested here, may emerge. Our findings emphasize the need to prepare for potential pandemics caused by influenza viruses possessing H5 HA, and will help individuals conducting surveillance in regions with circulating H5N1 viruses to recognize key residues that predict the pandemic potential of isolates, which will inform the development, production and distribution of effective countermeasures.
Journal Article
Characterization of SARS-CoV-2 Omicron BA.4 and BA.5 isolates in rodents
2022
The BA.2 sublineage of the SARS-CoV-2 Omicron variant has become dominant in most countries around the world; however, the prevalence of BA.4 and BA.5 is increasing rapidly in several regions. BA.2 is less pathogenic in animal models than previously circulating variants of concern
1
–
4
. Compared with BA.2, however, BA.4 and BA.5 possess additional substitutions in the spike protein, which play a key role in viral entry, raising concerns that the replication capacity and pathogenicity of BA.4 and BA.5 are higher than those of BA.2. Here we have evaluated the replicative ability and pathogenicity of BA.4 and BA.5 isolates in wild-type Syrian hamsters, human ACE2 (hACE2) transgenic hamsters and hACE2 transgenic mice. We have observed no obvious differences among BA.2, BA.4 and BA.5 isolates in growth ability or pathogenicity in rodent models, and less pathogenicity compared to a previously circulating Delta (B.1.617.2 lineage) isolate. In addition, in vivo competition experiments revealed that BA.5 outcompeted BA.2 in hamsters, whereas BA.4 and BA.2 exhibited similar fitness. These findings suggest that BA.4 and BA.5 clinical isolates have similar pathogenicity to BA.2 in rodents and that BA.5 possesses viral fitness superior to that of BA.2.
Results indicate that the sublineages BA.4 and BA.5 of SARS-CoV-2 Omicron variants have similar pathogenicity to that of the BA.2 sublineage in rodents, highlighting the importance of evaluating viral replication and pathogenesis using clinical isolates.
Journal Article