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"Watson, James R."
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The timescales of global surface-ocean connectivity
2016
Planktonic communities are shaped through a balance of local evolutionary adaptation and ecological succession driven in large part by migration. The timescales over which these processes operate are still largely unresolved. Here we use Lagrangian particle tracking and network theory to quantify the timescale over which surface currents connect different regions of the global ocean. We find that the fastest path between two patches—each randomly located anywhere in the surface ocean—is, on average, less than a decade. These results suggest that marine planktonic communities may keep pace with climate change—increasing temperatures, ocean acidification and changes in stratification over decadal timescales—through the advection of resilient types.
The adaptive capabilities of planktonic communities to climate change remain uncertain. Here, using Lagrangian particle tracking and network theory, the authors show that surface ocean currents can navigate the globe within 10 years, suggesting that marine plankton may keep pace with climate change.
Journal Article
Climate shock effects and mediation in fisheries
by
Moore, Stephanie K.
,
Jardine, Sunny L.
,
Samhouri, Jameal F.
in
Animals
,
Biological Sciences
,
Brachyura
2021
Climate shocks can reorganize the social–ecological linkages in food-producing communities, leading to a sudden loss of key products in food systems. The extent and persistence of this reorganization are difficult to observe and summarize, but are critical aspects of predicting and rapidly assessing community vulnerability to extreme events. We apply network analysis to evaluate the impact of a climate shock—an unprecedented marine heatwave—on patterns of resource use in California fishing communities, which were severely affected through closures of the Dungeness crab fishery. The climate shock significantly modified flows of users between fishery resources during the closures. These modifications were predicted by pre-shock patterns of resource use and were associated with three strategies used by fishing community member vessels to respond to the closures: temporary exit from the food system, spillover of effort from the Dungeness crab fishery into other fisheries, and spatial shifts in where crab were landed. Regional differences in resource use patterns and vessel-level responses highlighted the Dungeness crab fishery as a seasonal “gilded trap” for northern California fishing communities. We also detected disparities in climate shock response based on vessel size, with larger vessels more likely to display spatial mobility. Our study demonstrates the importance of highly connected and decentralized networks of resource use in reducing the vulnerability of human communities to climate shocks.
Journal Article
Unsupervised manifold learning of collective behavior
by
Watson, James R.
,
Hagstrom, George
,
Titus, Mathew
in
Algorithms
,
Behavior
,
Biology and Life Sciences
2021
Collective behavior is an emergent property of numerous complex systems, from financial markets to cancer cells to predator-prey ecological systems. Characterizing modes of collective behavior is often done through human observation, training generative models, or other supervised learning techniques. Each of these cases requires knowledge of and a method for characterizing the macro-state(s) of the system. This presents a challenge for studying novel systems where there may be little prior knowledge. Here, we present a new unsupervised method of detecting emergent behavior in complex systems, and discerning between distinct collective behaviors. We require only metrics, d (1) , d (2) , defined on the set of agents, X , which measure agents’ nearness in variables of interest. We apply the method of diffusion maps to the systems ( X , d ( i ) ) to recover efficient embeddings of their interaction networks. Comparing these geometries, we formulate a measure of similarity between two networks, called the map alignment statistic (MAS). A large MAS is evidence that the two networks are codetermined in some fashion, indicating an emergent relationship between the metrics d (1) and d (2) . Additionally, the form of the macro-scale organization is encoded in the covariances among the two sets of diffusion map components. Using these covariances we discern between different modes of collective behavior in a data-driven, unsupervised manner. This method is demonstrated on a synthetic flocking model as well as empirical fish schooling data. We show that our state classification subdivides the known behaviors of the school in a meaningful manner, leading to a finer description of the system’s behavior.
Journal Article
Supporting peer researchers: recommendations from our lived experience/expertise in community-based research in Canada
by
Watson, James R.
,
Tavares, James
,
Ibáñez-Carrasco, Francisco
in
Acquired immune deficiency syndrome
,
Advocacy
,
AIDS
2019
Community-based research in HIV in Canada is a complex undertaking. Including peer researchers living with HIV meaningfully is intricate and costly. However, this inclusion guarantees results that translate to community action, policy-making, and public awareness. Including HIV+ peer researchers expedites the path from research to intervention. However, we must constantly review our support in light of three implicit tasks performed by peer researchers: constant disclosure, emotional labor, and advocating for meaningful participation. Our team offers four pillars of support to reduce harm and strengthen the self-determination, confidence, advocacy, and impact for HIV+ peer researchers. The provision of emotional, instrumental, educational, and cultural/spiritual support might seldom be standardized within a study, but to successfully engage in community-based research, study teams must articulate what support can be offered in each area.
Journal Article
The Spatial Dynamics of Predators and the Benefits and Costs of Sharing Information
by
Watson, James R.
,
Barbier, Matthieu
in
Animals
,
Biology and Life Sciences
,
Computer and Information Sciences
2016
Predators of all kinds, be they lions hunting in the Serengeti or fishermen searching for their catch, display various collective strategies. A common strategy is to share information about the location of prey. However, depending on the spatial characteristics and mobility of predators and prey, information sharing can either improve or hinder individual success. Here, our goal is to investigate the interacting effects of space and information sharing on predation efficiency, represented by the expected rate at which prey are found and consumed. We derive a feeding functional response that accounts for both spatio-temporal heterogeneity and communication, and validate this mathematical analysis with a computational agent-based model. This agent-based model has an explicit yet minimal representation of space, as well as information sharing about the location of prey. The analytical model simplifies predator behavior into a few discrete states and one essential trade-off, between the individual benefit of acquiring information and the cost of creating spatial and temporal correlation between predators. Despite the absence of an explicit spatial dimension in these equations, they quantitatively predict the predator consumption rates measured in the agent-based simulations across the explored parameter space. Together, the mathematical analysis and agent-based simulations identify the conditions for when there is a benefit to sharing information, and also when there is a cost.
Journal Article
Scarcity induces conflict in Puerto Rican fisheries
by
Watson, James R
,
Villegas, Ciera
,
Woodill, A John
in
conflict
,
Cooperation
,
Environmental factors
2024
Small-scale fisheries provide vital food security for coastal communities worldwide, yet they face numerous challenges. In particular, fisheries conflicts arise when a marine resource is contested or disputed between a minimum of two actors. Despite the potentially large impacts of fisheries conflicts on marine-based economies, it is difficult to quantify the impact of conflict on fisheries production or on long-standing cooperative relationships that can be vital to the long-term sustainability of a given fishery. Previous work addressing fisheries conflicts has had a limited focus on quantitative measurements of how changes in fishing effort can influence how communities fall into conflict or make concerted efforts to cooperate. To address this knowledge gap, instances of conflict and cooperation amongst fishers in Puerto Rico were documented and categorized into different intensity levels. A linear probability model was then developed to estimate the probability of a conflict event occurring in a specific region, month, and year from 2012 to 2017. The model includes catch per unit effort as a predictor variable and controls for environmental factors. We found that an increase in catch per trip from the previous month has a negative and significant relationship with the probability of a conflict event. This result provides quantitative evidence for the supply-induced scarcity hypothesis, highlighting the importance of managing fisheries sustainably, to avoid future fisheries conflicts.
Journal Article
A protocol for the intercomparison of marine fishery and ecosystem models: Fish-MIP v1.0
by
Volkholz, Jan
,
Coll, Marta
,
Dunne, John P
in
Animal behavior
,
Anthropogenic changes
,
Anthropogenic factors
2018
Model intercomparison studies in the climate and Earth sciences communities have been crucial to building credibility and coherence for future projections. They have quantified variability among models, spurred model development, contrasted within- and among-model uncertainty, assessed model fits to historical data, and provided ensemble projections of future change under specified scenarios. Given the speed and magnitude of anthropogenic change in the marine environment and the consequent effects on food security, biodiversity, marine industries, and society, the time is ripe for similar comparisons among models of fisheries and marine ecosystems. Here, we describe the Fisheries and Marine Ecosystem Model Intercomparison Project protocol version 1.0 (Fish-MIP v1.0), part of the Inter-Sectoral Impact Model Intercomparison Project (ISIMIP), which is a cross-sectoral network of climate impact modellers. Given the complexity of the marine ecosystem, this class of models has substantial heterogeneity of purpose, scope, theoretical underpinning, processes considered, parameterizations, resolution (grain size), and spatial extent. This heterogeneity reflects the lack of a unified understanding of the marine ecosystem and implies that the assemblage of all models is more likely to include a greater number of relevant processes than any single model. The current Fish-MIP protocol is designed to allow these heterogeneous models to be forced with common Earth System Model (ESM) Coupled Model Intercomparison Project Phase 5 (CMIP5) outputs under prescribed scenarios for historic (from the 1950s) and future (to 2100) time periods; it will be adapted to CMIP phase 6 (CMIP6) in future iterations. It also describes a standardized set of outputs for each participating Fish-MIP model to produce. This enables the broad characterization of differences between and uncertainties within models and projections when assessing climate and fisheries impacts on marine ecosystems and the services they provide. The systematic generation, collation, and comparison of results from Fish-MIP will inform an understanding of the range of plausible changes in marine ecosystems and improve our capacity to define and convey the strengths and weaknesses of model-based advice on future states of marine ecosystems and fisheries. Ultimately, Fish-MIP represents a step towards bringing together the marine ecosystem modelling community to produce consistent ensemble medium- and long-term projections of marine ecosystems.
Journal Article
Impact of experienced HIV stigma on health is mediated by internalized stigma and depression: results from the people living with HIV stigma index in Ontario
by
Lindsay, Joanne D.
,
Ajiboye, Monisola
,
Lo Hog Tian, Jason M.
in
Analysis
,
Biostatistics
,
Care and treatment
2021
Background
Experiences of HIV stigma remain prevalent across Canada, causing significant stress and negatively affecting the health and wellbeing of people living with HIV. While studies have consistently demonstrated that stigma negatively impacts health, there has been limited research on the mechanisms behind these effects. This study aims to identify which dimensions of stigma have significant relationships with self-rated health and examine the mechanisms by which those types of stigma impact self-rated health.
Methods
We recruited 724 participants to complete the People Living with HIV Stigma Index in Ontario, designed by people living with HIV to measure nuanced changes in stigma and discrimination. The present study utilizes data from externally validated measures of stigma and health risks that were included in the survey. First, we conducted multiple regression analyses to examine which variables had a significant impact on self-rated health. Results from the multiple regression guided the mediation analysis. A parallel mediation model was created with enacted stigma as the antecedent, internalized stigma and depression as the mediators, and self-rated health as the outcome.
Results
In the multiple regression analysis, internalized stigma (coefficient = −0.20,
p
< 0.01) and depression (coefficient = −0.07,
p
< 0.01) were both significant and independent predictors of health. Mediation analyses demonstrated that the relationship between enacted stigma and self-rated health is mediated in parallel by both internalized stigma [coefficient = −0.08, se = 0.03, 95% CI (−0.14, −0.02)] and depression [coefficient = −0.16, se = 0.03, 95% CI (−0.22, −0.11)].
Conclusions
We developed a mediation model to explain how HIV-related stigma negatively impacts health. We found that that enacted stigma, or experiences of prejudice or discrimination, can lead to internalized stigma, or internalization of negative thoughts regarding one’s HIV status and/or increased depressive symptoms which then may lead to worse overall health. Highlighting the importance of internalized stigma and depression has the potential to shape the development of targeted intervention strategies aimed at reducing the burden of stigma and improving the health and wellbeing of people living with HIV.
Journal Article