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"Wei-Ping Zhang"
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Temporal dynamics of nutrient uptake by neighbouring plant species
by
Zhang, Fang-Fang
,
Fornara, Dario
,
Zhang, Wei-Ping
in
Agricultural practices
,
Barley
,
biodiversity
2017
Summary The productivity of species‐diverse plant assemblages strongly depends on the temporal dynamics of nutrient uptake by competing neighbouring plants. Our understanding, however, of how rates of nitrogen (N), phosphorous (P) and potassium (K) uptake might change through time between neighbouring plant species under field conditions is still very limited. Here, we specifically measure the temporal trajectories of N, P and K uptake by staple food plants such as wheat (Triticum aestivum L.), barley (Hordeum vulgare L.) and maize (Zea mays L.) when growing either in monocultures or in intercropping systems. We ask how (i) plant species combinations, (ii) N fertilization and (iii) film mulching might affect key indexes of N, P and K uptake over time. We fit logistic models to characterize the nutrient uptake trajectories. Maximum cumulative N, P and K uptake (kg ha−1) by wheat and barley were significantly greater in wheat–maize or barley–maize intercropping systems than in wheat or barley monocultures. Cumulative nutrient uptake by intercropped maize (either with wheat or with barley) was reduced by interspecific competition at early growth stages, but it increased rapidly after wheat and barley were harvested. Maximum cumulative N and P (but not K) uptake by intercropped maize were significantly higher than the uptake by monoculture maize, particularly when N fertilizer or film mulching was applied. Intercropping induced a significant temporal niche differentiation in maximum daily nutrient uptake rates (kg ha−1 day−1) between intercropped species. Fertilization had much stronger effects on maximum cumulative nutrient uptake of maize than that of wheat and barley. Mulching significantly increased the maximum cumulative nutrient uptake of maize and advanced the time to reach its maximum daily P and K uptake rates. Our study provides evidence of an important temporal niche differentiation mechanism (‘temporal complementarity’) in nutrient uptake rates between neighbouring plant species. A better understanding of temporal trajectories of interspecific nutrient uptake rates remains crucial if we want to maximize the nutrient‐use efficiency and sustain overyielding (i.e. high food production) in plant species‐diverse systems such as intercropping. Lay Summary
Journal Article
Genome structure-based Juglandaceae phylogenies contradict alignment-based phylogenies and substitution rates vary with DNA repair genes
2023
In lineages of allopolyploid origin, sets of homoeologous chromosomes may coexist that differ in gene content and syntenic structure. Presence or absence of genes and microsynteny along chromosomal blocks can serve to differentiate subgenomes and to infer phylogenies. We here apply genome-structural data to infer relationships in an ancient allopolyploid lineage, the walnut family (Juglandaceae), by using seven chromosome-level genomes, two of them newly assembled. Microsynteny and gene-content analyses yield identical topologies that place
Platycarya
with
Engelhardia
as did a 1980s morphological-cladistic study. DNA-alignment-based topologies here and in numerous earlier studies instead group
Platycarya
with
Carya
and
Juglans
, perhaps misled by past hybridization. All available data support a hybrid origin of Juglandaceae from extinct or unsampled progenitors nested within, or sister to, Myricaceae.
Rhoiptelea chiliantha
, sister to all other Juglandaceae, contains proportionally more DNA repair genes and appears to evolve at a rate 2.6- to 3.5-times slower than the remaining species.
The phylogenetic relationship among genera within the walnut family Juglandaceae remains unclear. Here, the authors assemble the genomes of
Rhoiptelea chiliantha
and
Engelhardia roxburghiana
, resolve the topology of this family, and propose a hybrid origin of the family from progenitors nested within or sister to Myricaceae.
Journal Article
Population-genomic analyses reveal bottlenecks and asymmetric introgression from Persian into iron walnut during domestication
by
Liu, Jie
,
Zhang, Da-Yong
,
Ding, Ya-Mei
in
ancestry
,
Animal Genetics and Genomics
,
Archaeology
2022
Background
Persian walnut,
Juglans regia
, occurs naturally from Greece to western China, while its closest relative, the iron walnut,
Juglans sigillata
, is endemic in southwest China; both species are cultivated for their nuts and wood. Here, we infer their demographic histories and the time and direction of possible hybridization and introgression between them.
Results
We use whole-genome resequencing data, different population-genetic approaches (PSMC and GONE), and isolation-with-migration models (IMa3) on individuals from Europe, Iran, Kazakhstan, Pakistan, and China. IMa3 analyses indicate that the two species diverged from each other by 0.85 million years ago, with unidirectional gene flow from eastern
J. regia
and its ancestor into
J. sigillata
, including the shell-thickness gene. Within
J. regia
, a western group, located from Europe to Iran, and an eastern group with individuals from northern China, experienced dramatically declining population sizes about 80 generations ago (roughly 2400 to 4000 years), followed by an expansion at about 40 generations, while
J. sigillata
had a constant population size from about 100 to 20 generations ago, followed by a rapid decline.
Conclusions
Both
J. regia
and
J. sigillata
appear to have suffered sudden population declines during their domestication, suggesting that the bottleneck scenario of plant domestication may well apply in at least some perennial crop species. Introgression from introduced
J. regia
appears to have played a role in the domestication of
J. sigillata.
Journal Article
Litter functional dissimilarity accelerates carbon and nitrogen release from the decomposition of straw but not root in maize/legume intercropping
by
Fornara, Dario
,
Ren, Su-Xian
,
Surigaoge, Surigaoge
in
Agricultural practices
,
Agriculture
,
Agrochemicals
2025
Background and aims
The decomposition of shoot and root litter has been extensively studied in natural ecosystems. Our understanding of the decomposition of plant litter including carbon (C) and nitrogen (N) release from root residues is still limited in intercropping. We addressed how C and N release from straw and root decomposition might be affected in maize/legume intercrops.
Methods
A decomposition experiment was conducted within a field experiment including two N rates (i.e. no-N and N-addition), three monocultures (maize, soybean, and peanut), and two intercrops (maize/soybean and maize/peanut). Following five retrievals of polyethylene litterbag in 341 days, we assessed the C and N loss (i.e. release) and the mixing effects of both straw and root residues.
Results
Straws released 38.32% more C and 43.59% more N than root residues across all crop species. Maize/peanut residues showed faster C and N release than maize/soybean residues. The release of C and N was asynchronous in both straw and root decomposition in maize/peanut intercropping. Straw mixtures of maize and legume released C faster than expected from monoculture straw. Litter functional (i.e. initial chemical traits) dissimilarity between maize and legume accelerated C and N release from the decomposition of straw, but not root, in maize/legume intercropping.
Conclusions
These results suggest that C and N release from maize/legume residues can be explained by both residue quality and litter functional dissimilarity. Our findings have important implications for the management of straw and root residues to reduce reliance on chemical fertilizers in intercropping.
Journal Article
Facilitation among plants can accelerate density-dependent mortality and steepen self-thinning lines in stressful environments
2017
The speed and slope of plant self-thinning are all affected by plant–plant interactions across environmental gradients. Possible mechanisms driving the self-thinning dynamics include the relative strength of root versus shoot competition, and the interplay between competition and facilitation. Although these mechanisms often act in concert, their relative importance has not yet been fully explored. We used both a one-layer and a two-layer zone-of-influence (ZOI) model to examine how competition and facilitation drive self-thinning across stress gradients. As a development of the traditional ZOI model, the two-layer version explicitly models shoot and root growth and neighbor interactions, and thus the overall size-symmetry of competition is regulated by the relative strength of root versus shoot competition. One-layer model simulations revealed that increasingly asymmetric competition accelerated thinning, and steepened (slope ranged from about –1 to –4/3) and lowered self-thinning lines. Stress slowed down density-dependent mortality considerably when competition was not completely symmetric. Stress significantly decreased the self-thinning intercept, while facilitation simply counteracted stress effects. Both stress and facilitation showed little effect on the slope. In the two-layer model, both stress and facilitation affected mortality in the same way as in the one-layer version when competition was not completely symmetric. Different from the one-layer model, the two-layer version showed that the effects of stress and facilitation on the self-thinning slope were mediated by the asymmetry of competition. As stress increased, the overall asymmetry of competition shifted from asymmetric to symmetric due to increased relative strength of root competition. High stress thus dramatically flattened self-thinning lines, whereas the inclusion of facilitation counteracted stress and led to steeper selfthinning lines. Our two-layer model is based on the current knowledge of plant–plant interactions, and better represents ecological realities. It can help elaborate experiments for testing the role of competition and facilitation in driving plant population dynamics.
Journal Article
Rhizobium inoculation improves yield advantages and soil Olsen phosphorus by enhancing interspecific facilitation in intercropping
2025
Background and aims
Maize/legume intercropping leads to overyielding and maintains soil nutrients. Rhizobium inoculation in maize/legume intercropping enhances soil nitrogen; however, its effects on overyielding and other soil nutrients in long-term intercropping systems is not well understood.
Methods
We conducted a split-split-plot experiment with three factors in northwest China since 2009. The main plot treatments were without or with rhizobium inoculation in faba bean (-Rhizobium, +Rhizobium), while the sub-plot treatments were five nitrogen-application rates and the sub-sub-plot treatments were cropping system (monocultures of faba bean, maize and faba bean/maize intercropping). During 2018-2020, we measured the yield, soil nutrients in the 0-20 cm topsoil, calculated biodiversity effects, and quantified interspecific interaction of intercropping using the relative interaction index.
Results
The grain yields in intercropping with treatments of -Rhizobium and + Rhizobium increased by 8.9% and 32%, respectively, compared with the corresponding weighted means of monocultures. Rhizobium inoculation increased the land-equivalent ratio at high nitrogen application. The combination of rhizobium inoculation and nitrogen application significantly enhanced the complementarity effect and relative interaction index of maize. With rhizobium inoculation, intercropping increased the soil Olsen P concentration by 13.9-59.9%, compared with the corresponding weighted means of monocultures which may be associated with interspecific facilitation, indicated by relative interaction index of maize.
Conclusions
Our study shows that rhizobium inoculation increased yield advantages and soil Olsen P concentration via enhanced interspecific facilitation of faba bean on maize in the intercropping system. Rhizobium inoculation can be used as an efficient strategy to enhance the benefits of intercropping, especially in low-fertility soil.
Journal Article
Cypripedium subtropicum (Orchidaceae) employs aphid colony mimicry to attract hoverfly (Syrphidae) pollinators
2020
• In Orchidaceae, pollination is mostly animal-mediated, and one-third of species have evolved a deceptive pollination mechanism without rewards. Cypripedium is a representative lineage of nonrewarding orchids restricted to temperate regions. Cypripedium subtropicum flowers are pollinated by hoverflies and have hairy tufts that visually resemble an aphid colony covered with honey dew.
• We recorded the behavior of hoverflies on the flowers, determined the breeding system of the species and the structure of hairy tufts, and investigated the roles of hairy tufts and floral volatiles in this specialized pollination by using pollination experiments, scanning electron microscopy, bioassays and chemical analyses.
• The white hairy tufts covering the sidelobes of the labellum provide edible rewards and serve as crucial visual lures for hoverflies. The flowers emit primarily (E)-β-farnesene and a smaller amount of β-pinene that were found to attract hoverflies.
• Our results suggest that C. subtropicum uses both visual mimicry of an aphid-colonized labellum with a reward and chemical mimicry of aphid alarm pheromones to attract hoverflies for pollination. This is the first described example of a rewarding mimicry system in plants, where the models are animals with their secretions and the reward is similar in nutrients to that of the model mimicked.
Journal Article
Crystalline CO2-based polycarbonates prepared from racemic catalyst through intramolecularly interlocked assembly
2015
The crystalline stereocomplexed polycarbonates can be prepared by mixing enantiopure polymers with opposite configuration, which derived from the asymmetric copolymerization with CO
2
using enantiopure catalyst or/and chiral epoxides. Herein, we develop a powerful strategy for producing crystalline intramolecular stereocomplexed polycarbonates from
racemic
catalysts, which possess similar thermal stability and crystalline behaviour in comparison with the stereocomplexes by mixing opposite enantiopure polymers. Living polymer chains shuttle between catalyst molecules with different configurations to produce diastereomeric active species which is suggested to be responsible for the formation of isotactic multiblock polycarbonates in
racemic
bimetallic cobalt catalyst-mediated stereoselective copolymerization of CO
2
and
meso
-epoxides. Solid-state NMR spectroscopy study suggests that the interaction in the carbonyl and methine regions is responsible for the strong crystallization capacity and compact package structure in the crystalline polycarbonates.
Crystalline polycarbonates can be formed by mixing enantiopure polymers with opposite configurations. Here, the authors produce crystalline intramolecular stereocomplexed polycarbonates using a racemic catalyst, and show that these display similar properties to those formed by mixing the two enantiomers.
Journal Article
Resolving sampling and population-size biases in domestication genomics supports a South Asian origin of walnuts
2026
Background
The inference of population structure in domestication studies is prone to biases whenever sampling is unbalanced and effective population sizes (
N
e
) differ across populations. Such biases can lead to the misclassification of large ancestral populations as admixed, particularly under single-origin domestication scenarios.
Results
We propose a novel parameterization strategy for the STRUCTURE software, combining the
F
model and alternative ancestry prior (along with a smaller initial ALPHA value), and simulations demonstrate that the strategy mitigates unbalanced sampling and unequal population size biases. We apply our strategy to the domestication history of the common walnut (
Juglans regia
), using whole-genome resequencing data from 298 individuals from across its range. The results support an origin of
J. regia
in South Asia, where walnut populations are characterized by high genetic diversity, extensive private allele content, low mutation load, and demographic stability. Building on this demographic framework, we further identify genomic regions under recent positive selection and candidate domestication genes involved in shell structure, pollen development, and lipid transport.
Conclusions
Our results clarify the long-standing debate on the geographic origin of walnut domestication and demonstrate that an optimized, model-aware use of STRUCTURE can substantially improve population-genetic inference in domestication studies and other systems characterized by complex demography.
Journal Article
Maize/peanut intercropping has greater synergistic effects and home-field advantages than maize/soybean on straw decomposition
2023
The decomposition of plant litter mass is responsible for substantial carbon fluxes and remains a key process regulating nutrient cycling in natural and managed ecosystems. Litter decomposition has been addressed in agricultural monoculture systems, but not in intercropping systems, which produce species-diverse litter mass mixtures. The aim here is to quantify how straw type, the soil environment and their combined effects may influence straw decomposition in widely practiced maize/legume intercropping systems.
Three decomposition experiments were conducted over 341 days within a long-term intercropping field experiment which included two nitrogen (N) addition levels (i.e. no-N and N-addition) and five cropping systems (maize, soybean and peanut monocultures and maize/soybean and maize/peanut intercropping). Experiment I was used to quantify litter quality effects on decomposition; five types of straw (maize, soybean, peanut, maize-soybean and maize-peanut) from two N treatments decomposed in the same maize plot. Experiment II addressed soil environment effects on root decomposition; soybean straw decomposed in different plots (five cropping systems and two N levels). Experiment III addressed 'home' decomposition effects whereby litter mass (straw) was remained to decompose in the plot of origin. The contribution of litter and soil effects to the home-field advantages was compared between experiment III ('home' plot) and I-II ('away' plot).
Straw type affected litter mass loss in the same soil environment (experiment I) and the mass loss values of maize, soybean, peanut, maize-soybean, and maize-peanut straw were 59, 77, 87, 76, and 78%, respectively. Straw type also affected decomposition in the 'home' plot environment (experiment III), with mass loss values of maize, soybean, peanut, maize-soybean and maize-peanut straw of 66, 74, 80, 72, and 76%, respectively. Cropping system did not affect the mass loss of soybean straw (experiment II). Nitrogen-addition significantly increased straw mass loss in experiment III. Decomposition of maize-peanut straw mixtures was enhanced more by 'home-field advantage' effects than that of maize-soybean straw mixtures. There was a synergistic mixing effect of maize-peanut and maize-soybean straw mixture decomposition in both 'home' (experiment III) and 'away' plots (experiment I). Maize-peanut showed greater synergistic effects than maize-soybean in straw mixture decomposition in their 'home' plot (experiment III). These findings are discussed in terms of their important implications for the management of species-diverse straw in food-production intercropping systems.
Journal Article