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62 result(s) for "Weldon, Laura"
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The comparative immunology of wild and laboratory mice, Mus musculus domesticus
The laboratory mouse is the workhorse of immunology, used as a model of mammalian immune function, but how well immune responses of laboratory mice reflect those of free-living animals is unknown. Here we comprehensively characterize serological, cellular and functional immune parameters of wild mice and compare them with laboratory mice, finding that wild mouse cellular immune systems are, comparatively, in a highly activated (primed) state. Associations between immune parameters and infection suggest that high level pathogen exposure drives this activation. Moreover, wild mice have a population of highly activated myeloid cells not present in laboratory mice. By contrast, in vitro cytokine responses to pathogen-associated ligands are generally lower in cells from wild mice, probably reflecting the importance of maintaining immune homeostasis in the face of intense antigenic challenge in the wild. These data provide a comprehensive basis for validating (or not) laboratory mice as a useful and relevant immunological model system. Laboratory mice are the cornerstone of immunology but how well they represent wild mice is not clear. Here the authors compare and contrast various immune parameters between wild-caught mice and laboratory (C57BL/6) mice and identify a previously unknown myeloid cell population specific to wild mice.
The Gut Microbiota of Wild Mice
The gut microbiota profoundly affects the biology of its host. The composition of the microbiota is dynamic and is affected by both host genetic and many environmental effects. The gut microbiota of laboratory mice has been studied extensively, which has uncovered many of the effects that the microbiota can have. This work has also shown that the environments of different research institutions can affect the mouse microbiota. There has been relatively limited study of the microbiota of wild mice, but this has shown that it typically differs from that of laboratory mice (and that maintaining wild caught mice in the laboratory can quite quickly alter the microbiota). There is also inter-individual variation in the microbiota of wild mice, with this principally explained by geographical location. In this study we have characterised the gut (both the caecum and rectum) microbiota of wild caught Mus musculus domesticus at three UK sites and have investigated how the microbiota varies depending on host location and host characteristics. We find that the microbiota of these mice are generally consistent with those described from other wild mice. The rectal and caecal microbiotas of individual mice are generally more similar to each other, than they are to the microbiota of other individuals. We found significant differences in the diversity of the microbiotas among mice from different sample sites. There were significant correlations of microbiota diversity and body weight, a measure of age, body-mass index, serum concentration of leptin, and virus, nematode and mite infection.
The ecology of immune state in a wild mammal, Mus musculus domesticus
The immune state of wild animals is largely unknown. Knowing this and what affects it is important in understanding how infection and disease affects wild animals. The immune state of wild animals is also important in understanding the biology of their pathogens, which is directly relevant to explaining pathogen spillover among species, including to humans. The paucity of knowledge about wild animals' immune state is in stark contrast to our exquisitely detailed understanding of the immunobiology of laboratory animals. Making an immune response is costly, and many factors (such as age, sex, infection status, and body condition) have individually been shown to constrain or promote immune responses. But, whether or not these factors affect immune responses and immune state in wild animals, their relative importance, and how they interact (or do not) are unknown. Here, we have investigated the immune ecology of wild house mice-the same species as the laboratory mouse-as an example of a wild mammal, characterising their adaptive humoral, adaptive cellular, and innate immune state. Firstly, we show how immune variation is structured among mouse populations, finding that there can be extensive immune discordance among neighbouring populations. Secondly, we identify the principal factors that underlie the immunological differences among mice, showing that body condition promotes and age constrains individuals' immune state, while factors such as microparasite infection and season are comparatively unimportant. By applying a multifactorial analysis to an immune system-wide analysis, our results bring a new and unified understanding of the immunobiology of a wild mammal.
Nationwide Tracing of Two Top Freshwater Fish Invaders in Greece Using Environmental DNA Sampling
Alien fish invasions are causing devastating impacts on native freshwater fauna; thus, rigorous, non-invasive and cost-effective biomonitoring of lotic and lentic freshwaters to design and implement appropriate prevention and control measures is now a priority. In this study, we used a species-specific qPCR eDNA assay to monitor two of the most invasive fish species (Gambusia holbrooki and Pseudorasbora parva) in 15 river basins of Greece and validated these results with conventional fish sampling as well as existing field sampling data. Our monitoring provided new records of invasive species indicating basins for rigorous future monitoring and possible eradication attempts. The eDNA proved more sensitive as a detection tool (56% detection rate) compared to conventional electrofishing (50% detection rate) for G. holbrooki. In contrast, it proved less sensitive for detecting P. parva (38% accuracy) compared to electrofishing (44% accuracy), as evident by the two locations where the eDNA failed to detect the target species. Our study illustrates the potential of the eDNA method for regular, standardised monitoring of riverine habitats for invasive fish species by local managers for early detection. Finally, we discuss the application of eDNA in management interventions for identifying invasive species’ hotspots for management prioritisation, for early detection of invaders and for the monitoring of eradication/control actions.
A comparison of European eel Anguilla anguilla eDNA concentrations to fyke net catches in five Irish lakes
The European eel, Anguilla anguilla, is classified as critically endangered by the IUCN. To protect what remains of the European eel population, accurate monitoring methods for this species are important. Environmental DNA (eDNA) techniques are gaining popularity for ecological monitoring of aquatic organisms because they are sensitive and noninvasive. This study directly compared catch data from a standardized fyke‐net fishing survey with a single species A. anguilla eDNA survey in five freshwater lakes in Ireland. The eDNA was recovered by the filtration of water samples and amplified by quantitative real‐time polymerase chain reaction (qPCR). European eel eDNA was reliably determined in 83% (70/84) of surface water samples collected from lakes classified as having high, medium, and low eel populations. In addition, there was a positive association between the eDNA concentrations recovered and the eel population classification with lower eDNA concentrations in lakes classified as low eel population lakes. Similar amounts of A. anguilla eDNA were detected in water samples collected from open water and shore‐side, suggesting shore sampling is an adequate method for eel detection. Together, the results demonstrate that eDNA sampling is more sensitive for detecting eel presence in low eel population environments than standard survey methods and may be a useful noninvasive tool for monitoring A. anguilla species distribution. This study directly compared catch data from a fyke‐net fishing survey with an Anguilla anguilla eDNA survey in five freshwater lakes in Ireland. Eel eDNA was reliably determined in 83% (70/84) of surface water samples collected. The results demonstrate that eDNA sampling is more sensitive for detecting eel presence in low eel population environments than standard survey methods.
New boundaries: Redefining the geographical range of a threatened fish through environmental DNA survey
Accurate data on the distribution and population status of threatened fish species are fundamental for effective conservation planning and management. In this work, in order to reassess the distribution of the globally threatened Evia barbel, Barbus euboicus, we undertook an environmental DNA (eDNA) survey coupled with conventional electrofishing, focusing on major river basins in Evia Island in proximity to its known occurrence in a single Evian basin (Manikiatiko stream). For comparison purposes, we conducted eDNA sampling in several locations in the geographically closest continental river basin, the Sperchios basin (Central Greece) which hosts the closely related Barbus sperchiensis. Our results expand the known range of the Evia barbel on Evia adding four new river basins, apart from its type locality (Manikiatiko stream (EV3)). In a single Evian River, where the species had never been located before, there was also a positive eDNA signal for Barbus sperchiensis within the same basin. The research confirms the occurrence of Evia barbel in a wider geographical area, highlighting however the sensitive conservation status of the species due to its still very narrow geographical distribution. The biogeographical implications of our study, as well as potential conservation interventions, are discussed. The distribution of the critically endangered fish Barbus euboicus and the closely related Barbus spechiensis are re‐evaluated using a species‐specific eDNA survey combined with electrofishing.
A Centrifuge-Based Method for Identifying Novel Genetic Traits That Affect Root-Substrate Adhesion in Arabidopsis thaliana
The physical presence of roots and the compounds they release affect the cohesion between roots and their environment. However, the plant traits that are important for these interactions are unknown and most methods that quantify the contributions of these traits are time-intensive and require specialist equipment and complex substrates. Our lab developed an inexpensive, high-throughput phenotyping assay that quantifies root-substrate adhesion in Arabidopsis thaliana . We now report that this method has high sensitivity and versatility for identifying different types of traits affecting root-substrate adhesion including root hair morphology, vesicle trafficking pathways, and root exudate composition. We describe a practical protocol for conducting this assay and introduce its use in a forward genetic screen to identify novel genes affecting root-substrate interactions. This assay is a powerful tool for identifying and quantifying genetic contributions to cohesion between roots and their environment.