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The island nature of the UK has led to its long history of commercial marine fisheries, with associated recreational fisheries along and near to its extensive shoreline. In addition, an abundance of fresh waters provides extensive recreational fisheries, but few commercial fisheries, on rivers and lakes where catch-and-release is prevalent. Here, an overview is presented of these fisheries by describing their main features using the concepts of natural capital and ecosystem services and then considering the threats that they face and the management that has been developed in response. In the marine environment, a wide range of fish species is targeted, but the Orders Gadiformes, Perciformes, and Pleuronectiformes are particularly important. Far fewer species are available for exploitation in fresh waters, but the Orders Cypriniformes, Perciformes, and Salmoniformes are fished extensively. In total, the UK has in excess of three million recreational anglers in a population of approximately 65 million people. Threats to UK recreational fisheries include overfishing, physical habitat modification, acidification, chemical pollution, eutrophication, endocrine disrupters, nanoparticles, species introductions, and climate change. Great scientific and management advances have been made such that most of the required aquatic biological management activities are now based on mature science and are in many cases now largely operational matters. In addition, the work of the UK statutory bodies for fisheries is increasingly supplemented by the efforts of more independent groups, including through citizen science. Ecosystem-based management is now commonplace and activities have expanded above and away from the water to include the management of anglers and other members of society. The UK’s recreational fisheries continue to face substantial challenges, but there are also substantial grounds for great optimism for their future.

Environmental DNA offers great potential as a biodiversity monitoring tool. Previous work has demonstrated that eDNA metabarcoding provides reliable information for lake fish monitoring, but important questions remain about temporal and spatial repeatability, which is critical for understanding the ecology of eDNA and developing effective sampling strategies. Here, we carried out comprehensive spatial sampling of England's largest lake, Windermere, during summer and winter to (1) examine repeatability of the method, (2) compare eDNA results with contemporary gill‐net survey data, (3) test the hypothesis of greater spatial structure of eDNA in summer compared to winter due to differences in water mixing between seasons, and (4) compare the effectiveness of shore and offshore sampling for species detection. We find broad consistency between the results from three sampling events in terms of species detection and abundance, with eDNA detecting more species than established methods and being significantly correlated with rank abundance determined by long‐term data. As predicted, spatial structure was much greater in the summer, reflecting less mixing of eDNA than in the winter. For example Arctic charr, a deep‐water species, was only detected in deep, midlake samples in the summer, while littoral or benthic species such as minnow and stickleback were more frequently detected in shore samples. By contrast in winter, the eDNA of these species was more uniformly distributed. This has important implications for design of sampling campaigns, for example, deep‐water species could be missed and littoral/benthic species overrepresented by focusing exclusively on shoreline samples collected in the summer.

Identifying the molecular mechanisms facilitating adaptation to new environments is a key question in evolutionary biology, especially in the face of current rapid and human‐induced changes. Translocations have become an important tool for species conservation, but the attendant small population sizes and new ecological pressures might affect phenotypic and genotypic variation and trajectories dramatically and in unknown ways. In Scotland, the European whitefish (Coregonus lavaretus) is native to only two lakes and vulnerable to extirpation. Six new refuge populations were established over the last 30 years as a conservation measure. In this study, we examined whether there is a predictable ecological and evolutionary response of these fishes to translocation. We found eco‐morphological differences, as functional traits relating to body shape differed between source and refuge populations. Dual isotopic analyses suggested some ecological release, with the diets in refuge populations being more diverse than in source populations. Analyses of up to 9117 genome‐mapped SNPs showed that refuge populations had reduced genetic diversity and elevated inbreeding and relatedness relative to source populations, though genomic differentiation was low (FST = 0.002–0.030). We identified 14 genomic SNPs that showed shared signals of a selective response to translocations, including some located near or within genes involved in the immune system, nervous system and hepatic functions. Analysis of up to 120,897 epigenomic loci identified a component of consistent differential methylation between source and refuge populations. We found that epigenomic variation and genomic variation were associated with morphological variation, but we were not able to infer an effect of population age because the patterns were also linked with the methodology of the translocations. These results show that conservation‐driven translocations affect evolutionary potential by impacting eco‐morphological, genomic and epigenomic components of diversity, shedding light on acclimation and adaptation process in these contexts.

Determining the timing and location of fish reproductive events is crucial for the implementation of correct management and conservation schemes. Conventional methods used to monitor these events are often unable to assess the spawning activity directly or can be invasive and therefore problematic. This is especially the case when threatened fish populations are the study subject, such as the Arctic charr (Salvelinus alpinus L.) populations in Windermere (Cumbria, UK). Arctic charr populations have been studied in this lake since the 1940s, and the locations and characteristics of spawning grounds have been described in detail using techniques such as hydroacoustics, as well as physical and visual surveys of the lake bottom. Here, in conjunction with established netting surveys, we added an environmental DNA (eDNA) metabarcoding approach to assess the spatial distribution of Arctic charr in the lake throughout the year to test whether this tool could allow us to identify spawning locations and activity. Sampling was carried out between October 2017 and July 2018 at three locations in the lake, covering putative and known spawning sites. eDNA metabarcoding provided accurate spatial and temporal characterization of Arctic charr spawning events. Peaks of Arctic charr relative read counts from eDNA metabarcoding were observed during the spawning season and at specific locations of both putative and known spawning sites. Net catches of mature Arctic charr individuals confirmed the association between the Arctic charr spawning activity and the peaks of eDNA metabarcoding relative read counts. This study demonstrates the ability of eDNA metabarcoding to effectively and efficiently characterize the spatial and temporal nature of fish spawning in lentic systems. This study demonstrates the ability of environmental DNA (eDNA) metabarcoding to provide an accurate spatial and temporal characterization of Arctic charr spawning events in a lake setting. We observed peaks of Arctic charr relative read counts from eDNA metabarcoding during the spawning season and at specific locations of putative and known spawning sites. Net catches of mature Arctic charr individuals confirmed the association between the Arctic charr spawning activity and the peaks of eDNA.

Harvesting is often size‐selective, and in species with sexual size dimorphism, it may also be sex‐selective. A powerful approach to investigate potential consequences of size‐ and/or sex‐selective harvesting is to simulate it in a demographic population model. We developed a population‐based integral projection model for a size‐ and sex‐structured species, the commonly exploited pike (Esox lucius). The model allows reproductive success to be proportional to body size and potentially limited by both sexes. We ran all harvest simulations with both lower size limits and slot limits, and to quantify the effects of selective harvesting, we calculated sex ratios and the long‐term population growth rate (λ). In addition, we quantified to what degree purely size‐selective harvesting was sex‐selective, and determined when λ shifted from being female to male limited under size‐ and sex‐selective harvesting. We found that purely size‐selective harvest can be sex‐selective, and that it depends on the harvest limits and the size distributions of the sexes. For the size‐ and sex‐selective harvest simulations, λ increased with harvest intensity up to a threshold as females limited reproduction. Beyond this threshold, males became the limiting sex, and λ decreased as more males were harvested. The peak in λ, and the corresponding sex ratio in harvest, varied with both the selectivity and the intensity of the harvest simulation. Our model represents a useful extension of size‐structured population models as it includes both sexes, relaxes the assumption of female dominance, and accounts for size‐dependent fecundity. The consequences of selective harvesting presented here are especially relevant for size‐ and sex‐structured exploited species, such as commercial fisheries. Thus, our model provides a useful contribution toward the development of more sustainable harvesting regimes. Harvesting often targets animals of certain sizes, and for many species, it also targets a certain sex. We quantify the effects of size‐ and sex‐selective harvesting by simulating different scenarios in an exploited pike population. Our new two‐sex model could aid in sustainable management of harvested species.

Environmental DNA (eDNA) metabarcoding is transforming biodiversity monitoring in aquatic environments. Such an approach has been developed and deployed for monitoring lake fish communities in Great Britain, where the method has repeatedly shown a comparable or better performance than conventional approaches. Previous analyses indicated that 20 water samples per lake are sufficient to reliably estimate fish species richness, but it is unclear how reduced eDNA sampling effort affects richness, or other biodiversity estimates and metrics. As the number of samples strongly influences the cost of monitoring programmes, it is essential that sampling effort is optimised for a specific monitoring objective. The aim of this project was to explore the effect of reduced eDNA sampling effort on biodiversity metrics (namely species richness and community composition) using algorithmic and statistical resampling techniques of a data set from 101 lakes, covering a wide spectrum of lake types and ecological quality. The results showed that reliable estimation of lake fish species richness could, in fact, usually be achieved with a much lower number of samples. For example, in almost 90% of lakes, 95% of complete fish richness could be detected with only 10 water samples, regardless of lake area. Similarly, other measures of alpha and beta-diversity were not greatly affected by a reduction in sample size from 20 to 10 samples. We also found that there is no significant difference in detected species richness between shoreline and offshore sampling transects, allowing for simplified field logistics. This could potentially allow the effective sampling of a larger number of lakes within a given monitoring budget. However, rare species were more often missed with fewer samples, with potential implications for monitoring of invasive or endangered species. These results should inform the design of eDNA sampling strategies, so that these can be optimised to achieve specific monitoring goals.

Conventional modes of environmental governance, which typically exclude those stakeholders that are most directly linked to the specific place, frequently fail to have the desired impact. Using the example of lake water management in Loweswater, a small hamlet within the English Lake District, we consider the ways in which new \"collectives\" for local, bottom-up governance of water bodies can reframe problems in ways which both bind lay and professional people to place, and also recast the meaning of \"solutions\" in thought-provoking ways.

The ideal free distribution (IFD) theory is one of the most influential theories in evolutionary ecology. It predicts how animals ought to distribute themselves within a heterogeneous habitat in order to maximize lifetime fitness. We test the population level consequence of the IFD theory using 40-year worth data on pike (Esox lucius) living in a natural lake divided into two basins. We do so by employing empirically derived density-dependent survival, dispersal and fecundity functions in the estimation of basin-specific density-dependent fitness surfaces. The intersection of the fitness surfaces for the two basins is used for deriving expected spatial distributions of pike. Comparing the derived expected spatial distributions with 50 years data of the actual spatial distribution demonstrated that pike is ideal free distributed within the lake. In general, there was a net migration from the less productive north basin to the more productive south basin. However, a pike density-manipulation experiment imposing shifting pike density gradients between the two basins managed to switch the net migration direction and hence clearly demonstrated that the Windermere pike choose their habitat in an ideal free manner. Demonstration of ideal free habitat selection on an operational field scale like this has never been undertaken before.

The Arctic charr Salvelinus alpinus populations of Windermere, England’s largest natural lake in the Lake District of north-west England, have been studied since the 1940s. However, the species’ cultural importance has a much longer history and these populations have been fished since 1223. As early as 1660, Arctic charr were exploited in a high-profile commercial net fishery and greatly enjoyed by locals and in a ‘potted’ form by wealthier members of UK society. However, overfishing led to substantially decreased catches and commercial netting was stopped in 1921. Local fishing for Arctic charr persists to the present as a small recreational plumb-line fishery using artificial lures. These fishing activities and resulting catches have long held great cultural interest for the local community and visiting national and international tourists. The cultural importance of the Arctic charr populations of Windermere has recently been the subject of national media interest that culminated in a 2017 documentary film highlighting environmental issues facing the Arctic charr and also celebrating the role of this iconic species in the cultural life of Windermere. In addition, international recognition of the Arctic charr populations of Windermere also contributed to the Lake District becoming a UNESCO World Heritage Site in 2017.

Over the last fifty years, anthropogenic noise has increased dramatically in aquatic environments and is now recognised as a chronic form of pollution in coastal waters. However, this form of pollution has been largely neglected in inland water bodies. To date, very few studies have investigated the noise spectra in freshwater environments and at present no legislation exists to protect freshwater organisms from anthropogenic noise. The present study represents the first assessment of anthropogenic noise pollution in a large multi-use lake by characterising noise levels of the main ferry landings of the lake of Windermere, UK using Passive Acoustic Monitoring (PAM). During November 2014, acoustic samples (10 min long) were collected from such areas using a calibrated omni-directional hydrophone and their spectral content was analysed in 1/3 octave bands (dB re 1 µPa). Results indicate that the current noise levels in Windermere warrant further investigation as a potential threat to the fish community which occurs in this already delicate and pressured habitat. Based on results obtained, it is recommended that further studies focus on a wider geographical and temporal range in order to start to fill the knowledge and legislative gaps regarding anthropogenic noise monitoring in fresh waters.