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22
result(s) for
"Xiong, Ziyao"
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Application and discussion of statistical seismology in probabilistic seismic hazard assessment studies
by
Zhou, Shiyong
,
Piao, Jian
,
Pei, Weilai
in
Disasters
,
Earth and Environmental Science
,
Earth Sciences
2022
Earthquakes are one of the natural disasters that pose a major threat to human lives and property. Earthquake prediction propels the construction and development of modern seismology; however, current deterministic earthquake prediction is limited by numerous difficulties. Identifying the temporal and spatial statistical characteristics of earthquake occurrences and constructing earthquake risk statistical prediction models have become significant; particularly for evaluating earthquake risks and addressing seismic planning requirements such as the design of cities and lifeline projects based on the obtained insight. Since the 21st century, the occurrence of a series of strong earthquakes represented by the Wenchuan
M
8 earthquake in 2008 in certain low-risk prediction areas has caused seismologists to reflect on traditional seismic hazard assessment globally. This article briefly reviews the development of statistical seismology, emphatically analyzes the research results and existing problems of statistical seismology in seismic hazard assessment, and discusses the direction of its development. The analysis shows that the seismic hazard assessment based on modern earthquake catalogues in most regions should be effective. Particularly, the application of seismic hazard assessment based on ETAS (epidemic type aftershock sequence) should be the easiest and most effective method for the compilation of seismic hazard maps in large urban agglomeration areas and low seismic hazard areas with thick sedimentary zones.
Journal Article
Optimized Proportional-derivative Feedback-assisted Iterative Learning Control for Manipulator Trajectory Tracking
2024
Iterative learning control (ILC) is a popular scheme in the trajectory tracking of manipulators, greatly improving tracking accuracy despite often requiring multiple iterations over identical trajectories. This research introduces an optimization technique for ILC parameters, enhanced with proportional-derivative (PD) feedback control, which aims to significantly reduce tracking errors within a single iteration. In the proposed approach, a PD feedback controller is utilized in the first run, collecting error data. An ILC controller is then incorporated in the second run to minimize the tracking error. Utilizing the dynamic model of the system, the transcription method transforms the continuous-form optimization problem concerning the ILC parameters into a discrete form, enabling its solution via standard numerical optimization algorithms. To demonstrate the effectiveness of the proposed approach in reducing tracking errors, we compared the tracking errors for the first and second runs of the system using frequency-domain analysis and conducted simulations and experiments on two different trajectory types.
Journal Article
Time-Optimal Trajectory Planning of Six-Axis Manipulators Based on the Improved Direct Collocation Method with FMU
2022
The trajectory planning method with dynamics is the key to improving the motion performance of manipulators. The optimal control method (OCM) is a key technology to solve optimal problems with dynamics. There are direct and indirect methods in OCM; indirect methods are difficult to apply to engineering applications, and so direct methods are widely applied instead. The direct collocation method (DCM) is a technology in OCM to transform an optimal control problem (OCP) to a nonlinear problem (NLP), so that plenty of solvers can be used directly. However, the general DCM, for which it has been found that the explicit form of the right-hand-side (RHS) functions of state equations of the complex system in the OCP is hard to derive, is limited to solving the OCP of three-axis manipulators. This paper proposes an improved DCM to solve the OCP of six-axis manipulators, which can find the solution of the time-optimal trajectory for the motion of six-axis manipulators based on the improved DCM. The proposed method derives the RHS equations implicitly by introducing a Functional Mock-up Unit (FMU), which simplifies the representation of the RHS equations as a black-box model, so that the DCM can be applied to the OCP of six-axis manipulators. A simulation case of a three-axis manipulator accomplished in a related study works as a reference compared with our improved method to verify the solution consistence between the DCM using the explicit RHS equations or using the implicit RHS equations, and the loss of computational efficiency is acceptable. In the meantime, a simulation solution and an experiment of six-axis manipulators, which is a novel advancement, are presented to validate the proposed method.
Journal Article
Sequential Optimal Trajectory Planning Scheme for Robotic Manipulators along Specified Path Based on Direct Collocation Method
2024
Robotic manipulators play a pivotal role in modern intelligent manufacturing and unmanned production systems, often tasked with executing specific paths accurately. However, the input of the robotic manipulators is trajectory which is a path with time information. The resulting core technology is trajectory planning methods which are broadly classified into two categories: maximum velocity curve (MVC) methods and multiphase direct collocation (MPDC) methods. This paper concentrates on addressing challenges associated with the latter methods. In MPDC methods, the solving efficiency and accuracy are greatly influenced by the number of discretization nodes. When dealing with systems with complex dynamics, such as robotic manipulators, striking a balance between solving time and path discretization errors becomes crucial. We use a mesh refinement (MR) algorithm to find a suitable number of nodes under the premise of ensuring the path discretization error. So, the actual device can effectively implement the planned solutions. Nonetheless, the conventional application of the MR algorithm requires solving the original problem in each iteration; these processes are extremely time-consuming and may fail to solve when dealing with a complex dynamic system. As a result, we propose a sequential optimal trajectory planning scheme to solve the problem efficiently by dividing the original optimal control (OC) problem into two stages: path planning (PP) and trajectory planning (TP). In the PP stage, we employ a DC method based on arc length and an MR algorithm to identify key nodes along the specified path. This aims to minimize the approximation error introduced during discretization. In the TP stage, the identified key nodes serve as boundary conditions for an MPDC method based on time. This facilitates the generation of an optimal trajectory that maximizes motion performance, considering constant velocity in Cartesian space and dynamic constraints while keeping the path discretization error. Simulation and experiment are conducted with a six-axis robotic manipulator, ROCR6, and show significant potential for a wide range of applications in robotics.
Journal Article
Characterization of an aspartate aminotransferase encoded by YPO0623 with frequent nonsense mutations in Yersinia pestis
by
Cui, Yiming
,
Xiong, Ziyao
,
Han, Yanping
in
Aspartate aminotransferase
,
Aspartate Aminotransferases
,
Bacteria
2023
Yersinia pestis , the causative agent of plague, is a genetically monomorphic bacterial pathogen that evolved from Yersinia pseudotuberculosis approximately 7,400 years ago. We observed unusually frequent mutations in Y. pestis YPO0623, mostly resulting in protein translation termination, which implies a strong natural selection. These mutations were found in all phylogenetic lineages of Y. pestis , and there was no apparent pattern in the spatial distribution of the mutant strains. Based on these findings, we aimed to investigate the biological function of YPO0623 and the reasons for its frequent mutation in Y. pestis . Our in vitro and in vivo assays revealed that the deletion of YPO0623 enhanced the growth of Y. pestis in nutrient-rich environments and led to increased tolerance to heat and cold shocks. With RNA-seq analysis, we also discovered that the deletion of YPO0623 resulted in the upregulation of genes associated with the type VI secretion system (T6SS) at 26°C, which probably plays a crucial role in the response of Y. pestis to environment fluctuations. Furthermore, bioinformatic analysis showed that YPO0623 has high homology with a PLP-dependent aspartate aminotransferase in Salmonella enterica , and the enzyme activity assays confirmed its aspartate aminotransferase activity. However, the enzyme activity of YPO0623 was significantly lower than that in other bacteria. These observations provide some insights into the underlying reasons for the high-frequency nonsense mutations in YPO0623, and further investigations are needed to determine the exact mechanism.
Journal Article
Regulatory Functions of PurR in Yersinia pestis: Orchestrating Diverse Biological Activities
2023
The bacterium Yersinia pestis has developed various strategies to sense and respond to the complex stresses encountered during its transmission and pathogenic processes. PurR is a common transcriptional regulator of purine biosynthesis among microorganisms, and it modulates the transcription level of the pur operon to suppress the production of hypoxanthine nucleotide (IMP). This study aims to understand the functions and regulatory mechanisms of purR in Y. pestis. Firstly, we constructed a purR knockout mutant of Y. pestis strain 201 and compared certain phenotypes of the null mutant (201-ΔpurR) and the wild-type strain (201-WT). The results show that deleting purR has no significant impact on the biofilm formation, growth rate, or viability of Y. pestis under different stress conditions (heat and cold shock, high salinity, and hyperosmotic pressure). Although the cytotoxicity of the purR knockout mutant on HeLa and 293 cells is reduced, the animal-challenging test found no difference of the virulence in mice between 201-ΔpurR and 201-WT. Furthermore, RNA-seq and EMSA analyses demonstrate that PurR binds to the promoter regions of at least 15 genes in Y. pestis strain 201, primarily involved in purine biosynthesis, along with others not previously observed in other bacteria. Additionally, RNA-seq results suggest the presence of 11 potential operons, including a newly identified co-transcriptional T6SS cluster. Thus, aside from its role as a regulator of purine biosynthesis, purR in Y. pestis may have additional regulatory functions.
Journal Article
Unexpected oxidative cracking of diformyltricyclodecanes under catalyst-free and ultra-low temperature
2023
Abstract
The oxidative cracking of diformyltricyclodecanes (DFTD) to C6–C8 alkenes and alkenes were systematically studied in this work. A series of experiments was performed over a broad range of conditions (temperature: 40–60 °C; oxygen pressure: 0–1.0 Mpa; reaction time: 5–90 min, solvent selection) for exploring the reaction route and mechanism. Results show that the higher temperature and oxygen pressure, as well as tetrahydrofuran (THF) as solvent are of benefit to the generation of cracking products. In addition, the kinetics of this reaction was explored by the dynamic fitting. The obtained kinetics parameters demonstrate that the transformation of intermediate to cracking products possesses higher activation energy than to dicarboxyltricyclodecaneacids (DCTDA), showing that higher temperature is conducive to the generation of DFTD cracking products. This work firstly demonstrated that DFTD could be formed into C6-C8 alkenes containing the same as gasoline compound by the oxidative cracking, suggesting that the by-product of petroleum and coal could be transferred into fuels; this expanded the application of DCPD and will have significant and positive influence on the petroleum and coal chemical industry.
Journal Article
Regulatory Functions of PurR in IYersinia pestis/I: Orchestrating Diverse Biological Activities
by
Cui, Yiming
,
Xiong, Ziyao
,
Song, Yajun
in
Genetic aspects
,
Genetic transcription
,
Physiological aspects
2023
The bacterium Yersinia pestis has developed various strategies to sense and respond to the complex stresses encountered during its transmission and pathogenic processes. PurR is a common transcriptional regulator of purine biosynthesis among microorganisms, and it modulates the transcription level of the pur operon to suppress the production of hypoxanthine nucleotide (IMP). This study aims to understand the functions and regulatory mechanisms of purR in Y. pestis. Firstly, we constructed a purR knockout mutant of Y. pestis strain 201 and compared certain phenotypes of the null mutant (201-ΔpurR) and the wild-type strain (201-WT). The results show that deleting purR has no significant impact on the biofilm formation, growth rate, or viability of Y. pestis under different stress conditions (heat and cold shock, high salinity, and hyperosmotic pressure). Although the cytotoxicity of the purR knockout mutant on HeLa and 293 cells is reduced, the animal-challenging test found no difference of the virulence in mice between 201-ΔpurR and 201-WT. Furthermore, RNA-seq and EMSA analyses demonstrate that PurR binds to the promoter regions of at least 15 genes in Y. pestis strain 201, primarily involved in purine biosynthesis, along with others not previously observed in other bacteria. Additionally, RNA-seq results suggest the presence of 11 potential operons, including a newly identified co-transcriptional T6SS cluster. Thus, aside from its role as a regulator of purine biosynthesis, purR in Y. pestis may have additional regulatory functions.
Journal Article
Effect of tidal stress on fault nucleation and failure of the 2007 M ^sub s^6.4 Ning'er earthquake
2016
Based on calculations of the tidal Coulomb failure stress and investigations of the correlation between the Earth tide and the Ning'er earthquake sequence, the processes of fault nucleation and failure were simulated. In these simulations we consider the influence of tidal stresses using the rate- and state-dependent friction laws. Furthermore, the effects on tidal triggering due to the stress amplitude and periodic oscillation properties were investigated, and the triggering effects between the tidal normal and tidal shear stresses were compared. The results showed that the Ning'er earthquake sequence was a physical consequence of tidal effects. A transition period T ^sub 0^ exists between the nucleation and failure processes of a seismic fault. When the period T of stress is equal to or becomes larger than T ^sub 0^, the fault response becomes dependent on the periodic features of the loading stress; however, for T < T ^sub 0^, the response of the fault is nearly independent of the period. Both the tidal normal and tidal shear stresses have similar effect in the nucleation and failure processes; the clock changes generally increase with the maximum amplitudes of the tidal stresses. Tidal normal and tidal shear stresses with positive amplitudes mainly induce earthquake triggering; however, the triggering effects induced by negative tidal stresses are smaller and faults are not sensitive to negative tidal stresses. Our results primarily reveal the physical mechanisms of tidal stress triggering.
Journal Article
Effect of tidal stress on fault nucleation and failure of the 2007 M sub(s)6.4 Ning'er earthquake
2016
Based on calculations of the tidal Coulomb failure stress and investigations of the correlation between the Earth tide and the Ning'er earthquake sequence, the processes of fault nucleation and failure were simulated. In these simulations we consider the influence of tidal stresses using the rate- and state-dependent friction laws. Furthermore, the effects on tidal triggering due to the stress amplitude and periodic oscillation properties were investigated, and the triggering effects between the tidal normal and tidal shear stresses were compared. The results showed that the Ning'er earthquake sequence was a physical consequence of tidal effects. A transition period T sub(0) exists between the nucleation and failure processes of a seismic fault. When the period T of stress is equal to or becomes larger than T sub(0), the fault response becomes dependent on the periodic features of the loading stress; however, for T < T sub(0), the response of the fault is nearly independent of the period. Both the tidal normal and tidal shear stresses have similar effect in the nucleation and failure processes; the clock changes generally increase with the maximum amplitudes of the tidal stresses. Tidal normal and tidal shear stresses with positive amplitudes mainly induce earthquake triggering; however, the triggering effects induced by negative tidal stresses are smaller and faults are not sensitive to negative tidal stresses. Our results primarily reveal the physical mechanisms of tidal stress triggering.
Journal Article