Explore the vast range of titles available.

Soil Actinomycetes have been used as biocontrol agents against soil-borne plant diseases, yet little is known about their effects on the structure of the rhizosphere microbiota and the long-term effects on crop yield and disease intensity after the application of Actinomycetes is stopped. Here, we conducted 3-year plot experiments to investigate the roles of two Actinomycetes strains (Streptomyces pactum Act12 and Streptomyces rochei D74) in the biocontrol of soil-borne root diseases and growth promotion of monkhood (Aconitum carmichaelii). We also examined their long-term effects after soil application of a mixed Actinomycetes preparation (spore powder) was completed. High-throughput sequencing was used to analyze shifts in the rhizosphere microbiota. The antifungal activity and root colonization ability of the two Actinomycetes were also tested. Disease severity of southern blight and root rot decreased following application of the Actinomycetes preparation, whereas biomass yield of tubers increased compared with the control group. Significant effects of disease control and plant growth promotion were also observed after application was stopped. The Actinomycetes preparation induced marked increases in the abundance of beneficial microbes and decreases in the abundance of harmful microbes in rhizosphere soil. Adding cell-free culture filtrates of both strains Act12 and D74 inhibited the growth of fungal pathogens capable of causing southern blight (Sclerotium rolfsii) and root rot (Fusarium oxysporum) in A. carmichaelii. A GFP-labeled strain was used to show that D74 can colonize roots of A. carmichaelii. In conclusion, a preparation of two Actinomycetes plays a role in the biocontrol of root diseases and growth promotion of A. carmichaelii by inhibiting pathogen growth and shaping the rhizosphere microbiota.

The use of beneficial microbes to improve drought resistance in crops has great application potential in agricultural production, yet the effects of actinomycetes upon crop resistance to drought are rarely reported. Streptomyces pactum Act12 is a known multi-functional biocontrol agent of soil-borne diseases in several horticultural crops and medicinal plants. Here, we systematically analyzed how Act12 treatment affects drought resistance in drought-sensitive wheat (Triticum aestivum L.) cultivar Xinong 979 by considering both its effects and underlying mechanisms. After seed exposure to a cell-free culture filtrate of Act12, we measured several plant growth variables, osmotic adjustment and antioxidant capacity, cell membrane peroxidation, and drought resistance-related gene expression in wheat seedlings under drought stress conditions simulated by polyethylene glycol 6000. Results showed that, under drought stress, wheat seedling exposure to Act12 cell-free filtrate facilitated plant growth, with significant increases in shoot fresh weight (21.3%), shoot length (10.3%), and root length (13.6%). Act12 treatment also significantly increased total soluble sugar content in wheat leaves while decreasing their malondialdehyde content by 20.5%. Under non-drought conditions, Act12 treatment increased the content of both proline and glutathione in wheat leaves; however, both were lowered in Act12-treated plants compared with non-treated plants at 96 h of drought stress. Further analysis revealed that Act12 treatment increased the content of leaf abscisic acid and upregulated the expression levels of several drought resistance-related genes, such as EXPA2, EXPA6, P5CS, and SnRK2. These results suggest that application of S. pactum Act12 can enhance the osmotic adjustment and antioxidant capacity of plants via induction of abscisic acid accumulation and up-regulation of drought resistance-related gene expression, thereby mitigating drought stress impact in wheat.

Considerable biological decline of continuously cropped alfalfa may be tightly linked to rhizosphere metabolism. However, plant-soil feedbacks and age-related metabolic changes in alfalfa stands remain unexplored. The aim of this study was to identify the linkages of rhizosphere and root metabolites, particularly autotoxins and prebiotics, to alfalfa decline under continuous cropping. We performed liquid chromatography–mass spectrometry for non-targeted metabolomic profiling of rhizosphere soils and alfalfa roots in 2- and 6-year-old stands. Differentially abundant metabolites that responded to stand age and associated metabolic pathways were identified. Compared with bulk soils, rhizosphere soils were enriched with more triterpenoid saponins (e.g., medicagenic acid glycosides), which showed inhibitory effects on seed germination and seedling growth. These autotoxic metabolites were accumulated in the old stand age, and their relative abundances were negatively correlated with plant growth, yield, and quality traits, as well as soil total nitrogen and alkali-hydrolyzable nitrogen concentrations. In contrast, prebiotic metabolites, represented by glycerolipids (e.g., glycerophosphocholine) and fatty acyls (e.g., colnelenic acid), were depleted in rhizosphere soils in the old stand. The relative abundances of glycerolipids and fatty acyls were positively correlated with plant traits and soil available phosphorus and alkali-hydrolyzable nitrogen concentrations. Age-induced changes in the rhizosphere metabolome mirrored the reprogramming patterns of root metabolome. The pathways of terpenoid backbone biosynthesis and plant hormone signal transduction, as well as metabolism of galactose, glycerophospholipid, and ɑ-linolenic acid in alfalfa roots were affected by stand age. The upregulation of terpenoid backbone biosynthesis in alfalfa roots of old plants, which stimulated triterpenoid saponin biosynthesis and exudation. Rhizosphere accumulation of autotoxins was accompanied by depletion of prebiotics, leading to soil degradation and exacerbating alfalfa decline. This research aids in the development of prebiotics to prevent and manage continuous cropping obstacles in alfalfa.

Orobanche cumana Wallr. is a root parasitic plant that causes considerable yield losses of up to 50% in sunflower Helianthus annuus plantations. The holoparasite fulfills its entire demand for water, minerals, and organic nutrients from the host’s vascular system. Agronomic practices alone are not effective in controlling this pest. This study investigated the mechanism of a verified plant growth-promoting strain, Streptomyces rochei D74, on the inhibition of the parasitism of O. cumana in a co-culture experiment. We conducted potted and sterile co-culture experiments using sunflower, O. cumana, and S. rochei D74. Our results suggest that the inoculated bacteria invoked the sunflower systemic resistance (SAR and ISR) by increasing the activity of resistance-related enzymes (SOD, POD, PPO, and PAL), the gene expression of systemic resistance marker genes (PR-1 and NPR1), ethylene synthesis genes (HACS. 1 and ACCO1), and JA synthesis genes (pin2 and lox). The expression levels of ISR marker genes (lox, HACS. 1, ACCO1, and pin2) increased by 1.66–7.91-fold in the seedling stage. Simultaneously, S. rochei D74 formed a protective layer on the sunflower root surface, preventing O. cumana from connecting to the vascular system of the sunflower roots. In addition, S. rochei D74 reduced 5DS synthesis of the strigol precursor substance, resulting in a reduction in O. cumana germination. These results demonstrated that the S. rochei D74 strain improved systemic resistance and decreased seed germination to prevent O. cumana parasitism.

The growth and biological decline of alfalfa may be linked to the rhizosphere microbiome. However, plant–microbe interactions in the rhizosphere of alfalfa and associated microbial community variations with stand age remain elusive. This study explored the successional pattern of rhizosphere microbial communities across different aged alfalfa stands and its relationship with alfalfa decline. Rhizosphere soils were collected from 2- and 6-year-old alfalfa stands. Control soils were collected from interspaces between alfalfa plants in the same stands. Soil bacterial and fungal communities were characterized by 16S and ITS rRNA gene sequencing, respectively. Specific microbial taxa colonized the rhizosphere soils, but not the control soils. The rhizosphere-specific taxa mainly included potentially beneficial genera (e.g., Dechloromonas, Verrucomicrobium) in the young stand and harmful genera (e.g., Peziza, Campylocarpon) in the old stand. Alfalfa roots regulated soil microbial communities by selective promotion or inhibition of distinct taxa. The majority of time-enriched taxa were reported as harmful fungi, whose relative abundances were negatively correlated with plant traits. Time-depleted taxa were mostly known as beneficial bacteria, which had relative abundances positively correlated with plant traits. The relative abundances of functional bacterial genes associated with vancomycin biosynthesis, zeatin biosynthesis, and amino acid metabolism trended lower in rhizosphere soils from the old stand. An upward trend was observed for fungal pathogens and wood saprotrophs with increasing stand age. The results suggest that root activity drives the negative succession of rhizosphere microbial communities during alfalfa decline in old stands.

Drought stress is the primary abiotic factor affecting wheat growth, development, and yield formation. The application of plant growth-promoting rhizobacteria (PGPR) represents an environmentally sustainable approach to mitigate the impacts of drought stress on wheat. This study conducted field experiments using two winter wheat varieties, the drought-sensitive variety Jimai 22 and the drought-resistant variety Chang 6878, aiming to investigate the effects of Streptomyces pactum Act12 inoculation on photosynthetic characteristics, physiological parameters, and yield traits during the jointing, heading, and middle-filling stages under drought stress. The results revealed that drought stresses significantly reduced chlorophyll content, leaf area, biomass, and yield in wheat, while Act12 inoculation significantly increased chlorophyll content, photosynthetic efficiency, antioxidant enzyme activity such as superoxide dismutase (SOD) and peroxidase (POD), osmolyte content (proline and soluble proteins), and decreased malondialdehyde (MDA) content. These combined effects alleviated drought stress, resulting in increased biomass and yield in wheat. Under drought stress, an increase in leaf proline content of 13.53% to 53.23% (Jimai 22) and 17.17% to 43.08% (Chang 6878) was observed upon Act12 inoculation. Moreover, a decrease in MDA content was recorded of 15.86% to 53.61% (Jimai 22) and 13.47% to 26.21% (Chang 6878). Notably, there was a corresponding increase in yield of 11.78% (Jimai 22) and 13.55% (Chang 6878). In addition, grain quality analysis revealed a significant improvement in grain hardness with Act12 inoculation. Therefore, Act12 demonstrates the potential for enhancing the sustainable development of wheat production in arid and semi-arid regions.

Orobanche cumama wallr. is the sunflower root parasitic weed with special life stage in which seed germination and parasitism take place in the soil. In practice, applying microbial agents and trapping crop rotation are utilized separately, or just one of them is selected to control O. cumana. The development of the sunflower industry is severely constrained on the farmland, where there is high density of O. cumana’s seed banks. In this study, two biological control methods were combined to solve the problem of O. cumana parasitism. The bioassay experiment showed that the high concentration fermentation filtrates of Streptomyces rochei D74 could effectively inhibit the germination and growth of the germ tube of O. cumana seeds. As the concentration was increased to 3.1 mg/mL, O. cumana was almost unable to sprout. A two-year pot experiment revealed that the use of D74 agents and sunflower–maize–sunflower rotation together promoted sunflower growth, as shown by the biomass accumulation, plant height, and denser root systems. The combined method resulted in a significant decrease in the number of O. cumana parasitism, compared to one method alone. Additionally, it affected the bacterial community composition of sunflower rhizosphere, mostly leading to an increase in Streptomyces and Brevibacterium and a decrease in Arthrobacter. This experiment, combined with multiple biological control, means significantly reducing the parasitism of O. cumana, which provides an effective foundation for practical application.

Orobanche cumana Wallr. is a holoparasite weed that extracts water and nutrients from its host the sunflower, thereby causing yield reductions and quality losses. However, the number of O. cumana parasites in the same farmland is distinctly different. The roots of some hosts have been heavily parasitized, while others have not been parasitized. What are the factors contributing to this phenomenon? Is it possible that sunflower interroot microorganisms are playing a regulatory role in this phenomenon? The role of the microbial community in this remains unclear. In this study, we investigated the rhizosphere soil microbiome for sunflowers with different degrees of O. cumana parasitism, that is, healthy, light infection, moderate infection, and severe infection on the sunflower roots. The microbial structures differed significantly according to the degree of parasitism, where Xanthomonadaceae was enriched in severe infections. Metagenomic analyses revealed that amino acid, carbohydrate, energy, and lipid metabolism were increased in the rhizosphere soils of severely infected sunflowers, which were attributed to the proliferation of Lysobacter. Lysobacter antibioticus (HX79) was isolated and its capacity to promote O. cumana seed germination and increase the germ tube length was confirmed by germination and pot experiments. Cyclo(Pro‐Val), an active metabolite of strain HX79, was identified and metabolomic and molecular docking approaches confirmed it was responsible for promoting O. cumana seed germination and growth. And we found that Pseudomonas mandelii HX1 inhibited the growth of O. cumana in the host rhizosphere soil. Our findings clarify the role of rhizosphere microbiota in regulating the parasite O. cumana to possibly facilitate the development of a new weed suppression strategy. Highlights Parasitic weed growth is influenced by microbes in the sunflower rhizosphere. The germination of Orobanche cumana seeds can be facilitated by Lysobacter antibioticus HX79 metabolites. The molecular docking strategy can be used for screening active chemicals. Parasitic weed growth is influenced by microbes in the sunflower rhizosphere. The germination of Orobanche cumana seeds can be facilitated by Lysobacter antibioticus HX79 metabolites. The molecular docking strategy can be used for screening active chemicals.

Background Lipopeptides are known as promising microbial surfactants and have been successfully used in enhancing oil recovery in extreme environmental conditions. A biosurfactant-producing strain, Bacillus atrophaeus 5-2a, was recently isolated from an oil-contaminated soil in the Ansai oilfield, Northwest China. In this study, we evaluated the crude oil removal efficiency of lipopeptide biosurfactants produced by B. atrophaeus 5-2a and their feasibility for use in microbial enhanced oil recovery. Results The production of biosurfactants by B. atrophaeus 5-2a was tested in culture media containing eight carbon sources and nitrogen sources. The production of a crude biosurfactant was 0.77 g L −1 and its surface tension was 26.52 ± 0.057 mN m −1 in a basal medium containing brown sugar (carbon source) and urea (nitrogen source). The biosurfactants produced by the strain 5-2a demonstrated excellent oil spreading activity and created a stable emulsion with paraffin oil. The stability of the biosurfactants was assessed under a wide range of environmental conditions, including temperature (up to 120 °C), pH (2–13), and salinity (0–50 %, w/v). The biosurfactants were found to retain surface-active properties under the extreme conditions. Additionally, the biosurfactants were successful in a test to simulate microbial enhanced oil recovery, removing 90.0 and 93.9 % of crude oil adsorbed on sand and filter paper, respectively. Fourier transform infrared spectroscopy showed that the biosurfactants were a mixture of lipopeptides, which are powerful biosurfactants commonly produced by Bacillus species. Conclusions The study highlights the usefulness of optimization of carbon and nitrogen sources and their effects on the biosurfactants production and further emphasizes on the potential of lipopeptide biosurfactants produced by B. atrophaeus 5-2a for crude oil removal. The favorable properties of the lipopeptide biosurfactants make them good candidates for application in the bioremediation of oil-contaminated sites and microbial enhanced oil recovery process.

Actinomycetes comprise a large group of biocontrol bacteria, yet no studies have reported on their effects against plant virus diseases. Here, we evaluated the control effects and the possible mechanisms of Streptomyces pactum Act12 against tomato yellow leaf curl virus disease (TYLCD) through field and pot experiments. We also analyzed changes in plant growth and rhizosphere microbial community composition following the application of Act12. The pre-inoculation of soil with the Act12 agent enhanced the activities of peroxidase and chitinase while upregulating the expression of genes related to plant systemic resistance (PR-1 and SIPI-II) and specific TYLCD resistance (SIPer1 and SIVRSLip) in tomato leaves under field conditions. The effects of Act12 at inducing a decline in TYLCD severity and promoting plant growth were deemed satisfactory in all three field experiments. In the pot experiments, Act12 induced a decline in the viral DNA level and an enhancing of peroxidase, polyphenoloxidase, and phenylalanine ammonia lyase activities in tomato leaves. Additionally, Act12 treatment reduced the accumulation of H2O2 and O·−2, increased the levels of salicylic and jasmonic acids, and upregulated the expression of genes related to plant resistance and RNA interference in tomato leaves. Applying Act12 also increased the diversity of bacteria and the abundance of potential beneficial microbes (e.g., Trichoderma and Bacillus) in the root-zone and root-surface soils, resulting in modular differentiation of co-occurrence networks. In conclusion, applying the S. pactum Act12 agent reduced TYLCD severity and promoted plant growth in tomato. Whether the changes of resistance-related gene expression and rhizosphere microbial community composition contribute to TYLCV resistance needs to be further investigated.