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1,139 result(s) for "Yang, Yujia"
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Prognostic value of the pretreatment systemic immune-inflammation index in patients with prostate cancer: a systematic review and meta-analysis
Background The systemic immune-inflammation index (SII) is a novel biomarker to predict the prognosis of some malignant tumors based on neutrophil, platelet, and lymphocyte counts. Evidence is scarce about the prognostic value of SII for prostate cancer patients. This systematic review and meta-analysis was conducted to explore the prognostic value of the SII in prostate cancer. Methods The PubMed, Embase, Web of Science, and Cochrane Library (CENTRAL) databases were searched to determine eligible studies from inception to August 15, 2022. Hazard ratios (HRs) with 95% confidence intervals (CIs) were extracted to pool the results. Statistical analyses were conducted by using Stata 17.0 software. Results A total of 12 studies with 8083 patients were included. The quantitative synthesis showed that a high SII was related to poor overall survival (OS) (HR = 1.44, 95% CI 1.23–1.69, p  < 0.001). Furthermore, a subgroup analysis showed that a high SII was associated with poor OS in the groups of any ethnicity, tumor type, and cutoff value. An increased SII was also associated with inferior progression-free survival (PFS) (HR = 1.80, 95% CI 1.27–2.56, p  = 0.001). In the subgroup analysis, a high SII value was related to poor PFS in Asian patients (HR = 4.03, 95% CI 1.07–15.17, p  = 0.04) and a cutoff value > 580 (HR = 1.19, 95% CI 1.04–1.36, p  = 0.01). Conclusion Based on the current evidence, a high pretreatment SII may be associated with poor OS and PFS. The SII may serve as an important prognostic indicator in patients with prostate cancer. More rigorously designed studies are needed to explore the SII and the prognosis of prostate cancer.
Identification of sex determination locus in sea cucumber Apostichopus japonicus using genome-wide association study
Background Sex determination mechanisms are complicated and diverse across taxonomic categories. Sea cucumber Apostichopus japonicus is a benthic echinoderm, which is the closest group of invertebrates to chordate, and important economic and ecologically aquaculture species in China. A. japonicus is dioecious, and no phenotypic differences between males and females can be detected before sexual maturation. Identification of sex determination locus will broaden knowledge about sex-determination mechanism in echinoderms, which allows for the identification of sex-linked markers and increases the efficiency of sea cucumber breeding industry. Results Here, we integrated assembly of a novel chromosome-level genome and resequencing of female and male populations to investigate the sex determination mechanisms of A. japonicus . We built a chromosome-level genome assembly AJH1.0 using Hi-C technology. The assembly AJH1.0 consists of 23 chromosomes ranging from 22.4 to 60.4 Mb. To identify the sex-determination locus of A. japonicus , we conducted genome-wide association study (GWAS) and analyses of distribution characteristics of sex-specific SNPs and fixation index F ST . The GWAS analysis showed that multiple sex-associated loci were located on several chromosomes, including chromosome 4 (24.8%), followed by chromosome 9 (10.7%), chromosome 17 (10.4%), and chromosome 18 (14.1%). Furthermore, analyzing the homozygous and heterozygous genotypes of plenty of sex-specific SNPs in females and males confirmed that A. japonicus might have a XX/XY sex determination system. As a physical region of 10 Mb on chromosome 4 included the highest number of sex-specific SNPs and higher F ST values, this region was considered as the candidate sex determination region (SDR) in A. japonicus . Conclusions In the present study, we integrated genome-wide association study and analyses of sex-specific variations to investigate sex determination mechanisms. This will bring novel insights into gene regulation during primitive gonadogenesis and differentiation and identification of master sex determination gene in sea cucumber. In the sea cucumber industry, investigation of molecular mechanisms of sex determination will be helpful for artificial fertilization and precise breeding.
Integrated photonics enables continuous-beam electron phase modulation
Integrated photonics facilitates extensive control over fundamental light–matter interactions in manifold quantum systems including atoms 1 , trapped ions 2 , 3 , quantum dots 4 and defect centres 5 . Ultrafast electron microscopy has recently made free-electron beams the subject of laser-based quantum manipulation and characterization 6 – 11 , enabling the observation of free-electron quantum walks 12 – 14 , attosecond electron pulses 10 , 15 – 17 and holographic electromagnetic imaging 18 . Chip-based photonics 19 , 20 promises unique applications in nanoscale quantum control and sensing but remains to be realized in electron microscopy. Here we merge integrated photonics with electron microscopy, demonstrating coherent phase modulation of a continuous electron beam using a silicon nitride microresonator. The high-finesse ( Q 0  ≈ 10 6 ) cavity enhancement and a waveguide designed for phase matching lead to efficient electron–light scattering at extremely low, continuous-wave optical powers. Specifically, we fully deplete the initial electron state at a cavity-coupled power of only 5.35 microwatts and generate >500 electron energy sidebands for several milliwatts. Moreover, we probe unidirectional intracavity fields with microelectronvolt resolution in electron-energy-gain spectroscopy 21 . The fibre-coupled photonic structures feature single-optical-mode electron–light interaction with full control over the input and output light. This approach establishes a versatile and highly efficient framework for enhanced electron beam control in the context of laser phase plates 22 , beam modulators and continuous-wave attosecond pulse trains 23 , resonantly enhanced spectroscopy 24 – 26 and dielectric laser acceleration 19 , 20 , 27 . Our work introduces a universal platform for exploring free-electron quantum optics 28 – 31 , with potential future developments in strong coupling, local quantum probing and electron–photon entanglement. A silicon nitride microresonator is used for coherent phase modulation of a transmission electron microscope beam, with future applications in combining high-resolution microscopy with spectroscopy, holography and metrology.
Elevation‐Dependent Vegetation Greening and Its Responses to Climate Changes in the South Slope of the Himalayas
The South Slope of the Himalayas (SSH) is witnessing dynamic shifts in vegetation greenness driven by climatic conditions across elevation variability. Here, we analyzed greening patterns of natural vegetated surfaces along the elevational gradient and examined their connection to climate changes from 2000 to 2022. Over 50% area of SSH exhibited significant greening, with higher rates in Central Himalayas (CH) and Western Himalayas (WH) compared to Eastern Himalayas (EH). The relative change rate (RCR) showed a notable increasing vegetation greenness from ∼2,600 to ∼5,000 m, followed by a decreasing trend in all subregions. Results showed that air temperature promoted the vegetation greening significantly in the high mountains but caused heat stress in lowlands of CH and WH. Precipitation supported growth in the middle mountains across the region except EH, which faced waterlogging stress. These findings are valuable for understanding vegetation changes under future climate changes and advancing our knowledge of ecosystem responses. Plain Language Summary The South Slope of the Himalayas (SSH), known for its unique biodiversity and complex role in climate regulation, is undergoing noticeable changes in vegetation due to climate change. Due to diverse climatic environments and abrupt elevational variations, this region has different vegetation zones. However, there remains a gap in comprehensive studies addressing these changes. To fill this gap comprehensively, we utilized Normalized Vegetation Difference Index (NDVI) from 2000 to 2022 to analyze variations in naturally vegetated surface across the elevation and their correlation with climate. Our results revealed a significant increase in vegetation greenness across SSH and subregions (except Eastern Himalaya (EH)). The relative change rate (RCR) of NDVI indicated stronger vegetation growth at higher elevations from ∼2,600 to ∼5,000 m, followed by a decline in all subregions. Interestingly, further analyses revealed a warming induced vegetation growth in highland areas across the region, while lowland region faced heat stress in the Central Himalay (CH), and Western Himalaya (WH). Conversely, precipitation promoted vegetation in the middle‐elevated areas, although EH faced waterlogging stress. These contrasting responses, patterns, and trends in vegetation changes in the Himalayas highlight the need for a comprehensive understanding of specific spatial variations when devising climate change adaptation strategies. Key Points SSH has an obvious elevation‐dependent increasing trend in vegetation greenness, stronger at higher elevations Increasing warming promotes vegetation growth in highlands but resulting in heat stress in lowlands of the Central and Western Himalayas Precipitation helps in vegetation growth at middle elevated areas across the region, while the Eastern Himalaya faces waterlogging stress
Preoperative fibrinogen-to-albumin ratio, a potential prognostic factor for patients with stage IB-IIA cervical cancer
Background Previous studies have shown that fibrinogen-to-albumin ratio (FAR) is a novel prognostic immune biomarker in various diseases. In this study, we investigated the role of FAR in the prognosis of patients with stage IB-IIA cervical cancer (CC). Methods A total of 278 eligible participants with newly diagnosed CC (stage IB-IIA) who had undergone radical hysterectomy followed by adjuvant chemotherapy were enrolled in this study. Demographics, clinicopathological variables, and laboratory tests were obtained from the medical records. Risk factors for overall survival (OS) and recurrence-free survival (RFS) were evaluated by univariate and multivariate Cox proportional regression analyses. The association between OS, RFS, and FAR was assessed by the Kaplan–Meier method using log-rank test. Results FAR was associated with age, International Federation of Gynecology and Obstetrics (FIGO) stage, depth of the invasion, and C-reactive protein (CRP) level ( P  < 0.05). Preoperative FAR was an effective predictor for OS in CC patients with a cut-off value of 7.75 and an area under the curve (AUC) of 0.707 ( P  < 0.001). The univariate and multivariate Cox analyses indicated that FIGO stage and FAR were two independent risk factors for both OS and RFS ( P  < 0.05). Kaplan–Meier analysis confirmed that patients with high FAR levels showed significantly lower RFS ( P  = 0.004) and OS ( P  = 0.003) than those with low FAR levels. Conclusions This study indicated that elevated preoperative FAR might be a novel prognostic factor for CC patients with stage IB-IIA.
Organoids: new frontiers in tumor immune microenvironment research
The tumor microenvironment (TME) contains cells that regulate medication response and cancer growth in a major way. Tumor immunology research has been rejuvenated and cancer treatment has been changed by immunotherapy, a rapidly developing therapeutic approach. The growth patterns of tumor cells in vivo and the heterogeneity, complexity, and individuality of tumors produced from patients are not reflected in traditional two-dimensional tumor cell profiles. On the other hand, an in vitro three-dimensional (3D) model called the organoid model is gaining popularity. It can replicate the physiological and pathological properties of the original tissues in vivo . Tumor cells are the source of immune organoids. The TME characteristics can be preserved while preserving the variety of tumors by cultivating epithelial tumor cells with various stromal and immunological components. In addition to having genetic and physical similarities to human diseases and the ability to partially reconstruct the complex structure of tumors, these models are now widely used in research fields including cancer, developmental biology, regenerative mechanisms, drug development, disease modeling, and organ transplantation. This study reviews the function of organoids in immunotherapy and the tumor immune milieu. We also discuss current developments and suggest translational uses of tumor organoids in immuno-oncology research, immunotherapy modeling, and precision medicine.
The Genus Commiphora: An Overview of Its Traditional Uses, Phytochemistry, Pharmacology, and Quality Control
Myrrh is the resinous substance secreted by plants of the genus Commiphora. In traditional Chinese medicine, Ayurvedic medicine, and traditional Arabic medicine, myrrh is regarded as an important medicinal material, widely used in the treatment of trauma, arthritis, hyperlipidemia, and other diseases. This review explores the evolving scientific understanding of the genus Commiphora, covering facets of ethnopharmacology, phytochemistry, pharmacology, artificial cultivation, and quality control. In particular, the chemical constituents and pharmacological research are reviewed. More than 300 types of secondary metabolites have been identified through phytochemical studies of this genus. Guggulsterone is a bioactive steroid isolated mainly from Commiphora mukul. The two isomers, Z- and E-guggulsterone, have shown a wide range of in vitro and in vivo pharmacological effects, including anti-proliferation, antioxidant, anti-inflammatory, and antibacterial. However, the current scientific research on quality control of medicinal materials and identification of original plants is insufficient, which limits the reproducibility and accuracy of biological activity evaluation experiments. Therefore, the establishment of analytical protocols and standardization of extracts is an important step before biological evaluation. At the same time, in order to find more bioactive substances, it is necessary to strengthen the research on the stems, barks, and leaves of this genus. The sources used in this study include PubMed, CNKI, Web of Science, Google Scholar, and other databases, as well as multinational pharmacopoeias, ancient books of traditional medicine, herbal classics, and modern monographs.
HBO Promotes the Differentiation of Neural Stem Cells via Interactions Between the Wnt3/β-Catenin and BMP2 Signaling Pathways
Hyperbaric oxygen (HBO) therapy may promote neurological recovery from hypoxic-ischemic encephalopathy (HIE). However, the therapeutic effects of HBO and its associated mechanisms remain unknown. The canonical Wnt/β-catenin signaling pathways and bone morphogenetic protein (BMP) play important roles in mammalian nervous system development. The present study examined whether HBO stimulates the differentiation of neural stem cells (NSCs) and its effect on Wnt3/β-catenin and BMP2 signaling pathways. We showed HBO treatment (2 ATA, 60 min) promoted differentiation of NSCs into neurons and oligodendrocytes in vitro. In addition, rat hypoxic-ischemic brain damage (HIBD) tissue extracts also promoted the differentiation of NSCs into neurons and oligodendrocytes, with the advantage of reducing the number of astrocytes. These effects were most pronounced when these two were combined together. In addition, the expression of Wnt3a, BMP2, and β-catenin nuclear proteins were increased after HBO treatment. However, blockade of Wnt/β-catenin or BMP signaling inhibited NSC differentiation and reduced the expression of Wnt3a, BMP2, and β-catenin nuclear proteins. In conclusion, HBO promotes differentiation of NSCs into neurons and oligodendrocytes and reduced the number of astrocytes in vitro possibly through regulation of Wnt3/β-catenin and BMP2 signaling pathways. HBO may serve as a potential therapeutic strategy for treating HIE.
Towards integrated tunable all-silicon free-electron light sources
Extracting light from silicon is a longstanding challenge in modern engineering and physics. While silicon has underpinned the past 70 years of electronics advancement, a facile tunable and efficient silicon-based light source remains elusive. Here, we experimentally demonstrate the generation of tunable radiation from a one-dimensional, all-silicon nanograting. Light is generated by the spontaneous emission from the interaction of these nanogratings with low-energy free electrons (2–20 keV) and is recorded in the wavelength range of 800–1600 nm, which includes the silicon transparency window. Tunable free-electron-based light generation from nanoscale silicon gratings with efficiencies approaching those from metallic gratings is demonstrated. We theoretically investigate the feasibility of a scalable, compact, all-silicon tunable light source comprised of a silicon Field Emitter Array integrated with a silicon nanograting that emits at telecommunication wavelengths. Our results reveal the prospects of a CMOS-compatible electrically-pumped silicon light source for possible applications in the mid-infrared and telecommunication wavelengths. Extracting light from silicon is a longstanding challenge. Here, the authors report an experimental demonstration of free-electron-driven light emission from silicon nanogratings and investigates the feasibility of a compact, all-silicon tunable light source integrated with a silicon field emitter array.
Light phase detection with on-chip petahertz electronic networks
Ultrafast, high-intensity light-matter interactions lead to optical-field-driven photocurrents with an attosecond-level temporal response. These photocurrents can be used to detect the carrier-envelope-phase (CEP) of short optical pulses, and enable optical-frequency, petahertz (PHz) electronics for high-speed information processing. Despite recent reports on optical-field-driven photocurrents in various nanoscale solid-state materials, little has been done in examining the large-scale electronic integration of these devices to improve their functionality and compactness. In this work, we demonstrate enhanced, on-chip CEP detection via optical-field-driven photocurrents in a monolithic array of electrically-connected plasmonic bow-tie nanoantennas that are contained within an area of hundreds of square microns. The technique is scalable and could potentially be used for shot-to-shot CEP tagging applications requiring orders-of-magnitude less pulse energy compared to alternative ionization-based techniques. Our results open avenues for compact time-domain, on-chip CEP detection, and inform the development of integrated circuits for PHz electronics as well as integrated platforms for attosecond and strong-field science. On-chip optical-field emission devices may be useful for fast electronics and signal processing. Here the authors show a compact on-chip light phase detector capable of monitoring photocurrents oscillating at optical frequencies using electrically connected arrays of plasmonic bow-tie nanoantennae.