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result(s) for
"Yu, Z"
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Northern peatland carbon stocks and dynamics: a review
2012
Peatlands contain a large belowground carbon (C) stock in the biosphere, and their dynamics have important implications for the global carbon cycle. However, there are still large uncertainties in C stock estimates and poor understanding of C dynamics across timescales. Here I review different approaches and associated uncertainties of C stock estimates in the literature, and on the basis of the literature review my best estimate of C stocks and uncertainty is 500 ± 100 (approximate range) gigatons of C (Gt C) in northern peatlands. The greatest source of uncertainty for all the approaches is the lack or insufficient representation of data, including depth, bulk density and carbon accumulation data, especially from the world's large peatlands. Several ways to improve estimates of peat carbon stocks are also discussed in this paper, including the estimates of C stocks by regions and further utilizations of widely available basal peat ages. Changes in peatland carbon stocks over time, estimated using Sphagnum (peat moss) spore data and down-core peat accumulation records, show different patterns during the Holocene, and I argue that spore-based approach underestimates the abundance of peatlands in their early histories. Considering long-term peat decomposition using peat accumulation data allows estimates of net carbon sequestration rates by peatlands, or net (ecosystem) carbon balance (NECB), which indicates more than half of peat carbon (> 270 Gt C) was sequestrated before 7000 yr ago during the Holocene. Contemporary carbon flux studies at 5 peatland sites show much larger NECB during the last decade (32 ± 7.8 (S.E.) g C m−2 yr–1) than during the last 7000 yr (∼ 11 g C m−2 yr–1), as modeled from peat records across northern peatlands. This discrepancy highlights the urgent need for carbon accumulation data and process understanding, especially at decadal and centennial timescales, that would bridge current knowledge gaps and facilitate comparisons of NECB across all timescales.
Journal Article
Effective-mass model and magneto-optical properties in hybrid perovskites
2016
Hybrid inorganic-organic perovskites have proven to be a revolutionary material for low-cost photovoltaic applications. They also exhibit many other interesting properties, including giant Rashba splitting, large-radius Wannier excitons and novel magneto-optical effects. Understanding these properties as well as the detailed mechanism of photovoltaics requires a reliable and accessible electronic structure, on which models of transport, excitonic and magneto-optical properties can be efficiently developed. Here we construct an effective-mass model for the hybrid perovskites based on the group theory, experiment and first-principles calculations. Using this model, we relate the Rashba splitting with the inversion-asymmetry parameter in the tetragonal perovskites, evaluate anisotropic
g
-factors for both conduction and valence bands and elucidate the magnetic-field effect on photoluminescence and its dependence on the intensity of photoexcitation. The diamagnetic effect of exciton is calculated for an arbitrarily strong magnetic field. The pronounced excitonic peak emerged at intermediate magnetic fields in cyclotron resonance is assigned to the 3
D
±2
states, whose splitting can be used to estimate the difference in the effective masses of electron and hole.
Journal Article
Transformation between meron and skyrmion topological spin textures in a chiral magnet
2018
Crystal lattices with tetragonal or hexagonal structure often exhibit structural transitions in response to external stimuli
1
. Similar behaviour is anticipated for the lattice forms of topological spin textures, such as lattices composed of merons and antimerons or skyrmions and antiskyrmions (types of vortex related to the distribution of electron spins in a magnetic field), but has yet to be verified experimentally
2
,
3
. Here we report real-space observations of spin textures in a thin plate of the chiral-lattice magnet Co
8
Zn
9
Mn
3
, which exhibits in-plane magnetic anisotropy. The observations demonstrate the emergence of a two-dimensional square lattice of merons and antimerons from a helical state, and its transformation into a hexagonal lattice of skyrmions in the presence of a magnetic field at room temperature. Sequential observations with decreasing temperature reveal that the topologically protected skyrmions remain robust to changes in temperature, whereas the square lattice of merons and antimerons relaxes to non-topological in-plane spin helices, highlighting the different topological stabilities of merons, antimerons and skyrmions. Our results demonstrate the rich variety of topological spin textures and their lattice forms, and should stimulate further investigation of emergent electromagnetic properties.
A magnetically induced two-dimensional square lattice of merons and antimerons is observed in real space, along with its transformation into a hexagonal lattice of skyrmions at room temperature.
Journal Article
Androgen receptor functions in castration-resistant prostate cancer and mechanisms of resistance to new agents targeting the androgen axis
2014
The metabolic functions of androgen receptor (AR) in normal prostate are circumvented in prostate cancer (PCa) to drive tumor growth, and the AR also can acquire new growth-promoting functions during PCa development and progression through genetic and epigenetic mechanisms. Androgen deprivation therapy (ADT, surgical or medical castration) is the standard treatment for metastatic PCa, but patients invariably relapse despite castrate androgen levels (castration-resistant PCa, CRPC). Early studies from many groups had shown that AR was highly expressed and transcriptionally active in CRPC, and indicated that steroids from the adrenal glands were contributing to this AR activity. More recent studies showed that CRPC cells had increased expression of enzymes mediating androgen synthesis from adrenal steroids, and could synthesize androgens
de novo
from cholesterol. Phase III clinical trials showing a survival advantage in CRPC for treatment with abiraterone (inhibitor of the enzyme CYP17A1 required for androgen synthesis that markedly reduces androgens and precursor steroids) and for enzalutamide (new AR antagonist) have now confirmed that AR activity driven by residual androgens makes a major contribution to CRPC, and led to the recent Food and Drug Administration approval of both agents. Unfortunately, patients treated with these agents for advanced CRPC generally relapse within a year and AR appears to be active in the relapsed tumors, but the molecular mechanisms mediating intrinsic or acquired resistance to these AR-targeted therapies remain to be defined. This review outlines AR functions that contribute to PCa development and progression, the roles of intratumoral androgen synthesis and AR structural alterations in driving AR activity in CRPC, mechanisms of action for abiraterone and enzalutamide, and possible mechanisms of resistance to these agents.
Journal Article
Observation of Skyrmions in a Multiferroic Material
by
Yu, X. Z.
,
Ishiwata, S.
,
Tokura, Y.
in
Alloys
,
Axes of rotation
,
Condensed matter: electronic structure, electrical, magnetic, and optical properties
2012
A magnetic skyrmion is a topologically stable particle-like object that appears as a vortex-like spin texture at the nanometer scale in a chiral-lattice magnet. Skyrmions have been observed in metallic materials, where they are controllable by electric currents. Here, we report the experimental discovery of magnetoelectric skyrmions in an insulating chiral-lattice magnet Cu₂OSeO₃ through Lorentz transmission electron microscopy and magnetic susceptibility measurements. We find that the skyrmion can magnetically induce electric polarization. The observed magnetoelectric coupling may potentially enable the manipulation of the skyrmion by an external electric field without losses due to joule heating.
Journal Article
Cryo-EM analysis of the T3S injectisome reveals the structure of the needle and open secretin
2018
The bacterial type III secretion system, or injectisome, is a syringe shaped nanomachine essential for the virulence of many disease causing Gram-negative bacteria. At the core of the injectisome structure is the needle complex, a continuous channel formed by the highly oligomerized inner and outer membrane hollow rings and a polymerized helical needle filament which spans through and projects into the infected host cell. Here we present the near-atomic resolution structure of a needle complex from the prototypical
Salmonella
Typhimurium SPI-1 type III secretion system, with local masking protocols allowing for model building and refinement of the major membrane spanning components of the needle complex base in addition to an isolated needle filament. This work provides significant insight into injectisome structure and assembly and importantly captures the molecular basis for substrate induced gating in the giant outer membrane secretin portal family.
The bacterial type III secretion system of Gram-negative bacteria uses its core, the needle complex, to penetrate through the infected host cell membrane. Here authors show a near-atomic resolution structure of a needle complex which sheds light on the assembly and function of this nanomachine.
Journal Article
Real-space observation of a two-dimensional skyrmion crystal
2010
Magnetoelectric skyrmions
Skyrmions are stable topological textures with particle-like properties, a mathematical concept originally developed to describe nuclear particles, but which in the past decade has found application at all scales from microscopic to cosmological. Skyrmions have proved particularly useful to describe novel spin configurations in magnets, and last year the presence of skyrmions in the magnetic compounds MnSi and Fe
1−
x
Co
x
Si was confirmed in neutron scattering experiments. Now Yu
et al
. present striking real-space images, using transmission electron microscopy, of a two-dimensional skyrmion lattice for the latter compound, in the form of a hexagonal arrangement of swirling spin structures. The lattice is shown to be stable for a wide range of temperatures and magnetic fields. The authors speculate that the observed nanometre-scale spin topology may lead to interesting new magnetoelectric effects.
Skyrmions are stable topological textures with particle-like properties — a mathematical concept that was originally used to describe nuclear particles but has since turned up at all scales. Last year, the presence of skyrmions in the magnetic compounds MnSi and Fe
1−x
Co
x
Si was confirmed with neutron-scattering experiments. Here, real-space images are presented of a two-dimensional skyrmion lattice in a thin film of the latter compound. The observed nanometre-scale spin topology might reveal new magneto-transport effects.
Crystal order is not restricted to the periodic atomic array, but can also be found in electronic systems such as the Wigner crystal
1
or in the form of orbital order
2
, stripe order
3
and magnetic order. In the case of magnetic order, spins align parallel to each other in ferromagnets and antiparallel in antiferromagnets. In other, less conventional, cases, spins can sometimes form highly nontrivial structures called spin textures
4
,
5
,
6
,
7
,
8
,
9
,
10
,
11
,
12
,
13
,
14
,
15
,
16
,
17
,
18
,
19
,
20
,
21
,
22
,
23
. Among them is the unusual, topologically stable skyrmion spin texture, in which the spins point in all the directions wrapping a sphere
4
,
5
,
6
,
7
. The skyrmion configuration in a magnetic solid is anticipated to produce unconventional spin–electronic phenomena such as the topological Hall effect
24
,
25
,
26
. The crystallization of skyrmions as driven by thermal fluctuations has recently been confirmed in a narrow region of the temperature/magnetic field (
T
–
B
) phase diagram in neutron scattering studies of the three-dimensional helical magnets MnSi (ref.
17
) and Fe
1−
x
Co
x
Si (ref.
22
). Here we report real-space imaging of a two-dimensional skyrmion lattice in a thin film of Fe
0.5
Co
0.5
Si using Lorentz transmission electron microscopy. With a magnetic field of 50–70 mT applied normal to the film, we observe skyrmions in the form of a hexagonal arrangement of swirling spin textures, with a lattice spacing of 90 nm. The related
T
–
B
phase diagram is found to be in good agreement with Monte Carlo simulations. In this two-dimensional case, the skyrmion crystal seems very stable and appears over a wide range of the phase diagram, including near zero temperature. Such a controlled nanometre-scale spin topology in a thin film may be useful in observing unconventional magneto-transport effects.
Journal Article
Impurity-band transport in organic spin valves
2014
The central phenomenon in the field of organic spintronics is the large magnetoresistance in thick organic spin valves. A prerequisite for understanding the magnetoresistance is a reliable description of the device resistance, or the I-V characteristics. Here I show that the observed I-V characteristics in the organic spin valves is incompatible with charge injection into the organic’s lowest unoccupied molecular orbital or highest occupied molecular orbital but can be explained by electrons tunnelling into a broad impurity band located in the gap between these molecular orbitals. Voltage drop takes place mainly across depletion layers at the two electrode/organic interfaces, giving rise to electrode-limited charge transport. Spin-dependent electron tunnelling into the impurity band from the ferromagnetic electrodes results in spin accumulations inside the organic, which rapidly diffuses through the organic primarily via the exchange between impurity-band electrons. This picture explains the major magnetoresistance features and predicts enhanced capacitance in these devices.
The device resistance of organic spin valves is closely related to their large magnetoresistance, but the origin of this phenomenon is still unclear. Here, Yu provides an explanation in terms of electrons tunneling into a broad impurity band located between occupied and unoccupied molecular orbitals.
Journal Article
A first-principles-based high fidelity, high throughput approach for the design of high entropy alloys
2022
Here, we present a preselected small set of ordered structures (PSSOS) method, a first principles-based high fidelity (HF), high throughput (HT) approach, for fast screening of the large composition space of high entropy alloys (HEAs) to select the most energetically stable, single-phase HEAs. Taking quinary AlCoCrFeNi HEA as an example system, we performed PSSOS calculations on the formation energies and mass densities of 8801 compositions in both FCC and BCC lattices and selected five most stable FCC and BCC HEAs for detailed analysis. The calculation results from the PSSOS approach were compared with existing experimental and first-principles data, and the good agreement was achieved. We also compared the PSSOS with the special quasi-random structures (SQS) method, and found that with a comparable accuracy, the PSSOS significantly outperforms the SQS in efficiency, making it ideal for HF, HT calculations of HEAs.
Journal Article
RUMINANT NUTRITION SYMPOSIUM: How to use data on the rumen microbiome to improve our understanding of ruminant nutrition
2015
Metagenomics and high-throughput sequencing have greatly expanded our knowledge of the rumen microbiome. Surveys of all 4 cellular microbial groups (bacteria, archaea, protozoa, and fungi) reveal profound diversity. Even so, evidence exists for core members to perform key degradative or fermentative roles for the host. Some core members are functionally similar yet taxonomically diverse, and noncore members are particularly diverse and probably vary among diets, animals, and over time after feeding. Gains in functional knowledge are being made and offer much potential not only to improve fiber digestibility, decrease methane emissions, and improve efficiency of nitrogen usage but also to help explain the differences in nutrient digestibility or feed efficiency among animals fed the same diet. Integrated research using metagenomics, bioinformatics, traditional ruminant nutrition, and statistical inferences have provided opportunities for ruminant nutritionists and rumen microbiologists to work synergistically to improve nutrient utilization efficiency while minimizing output of wastes and emissions of methane and ammonia. Examples we highlight include residual feed intake, rumen biohydrogenation of unsaturated fatty acids, and dietary inclusion of ionophores. However, there are still some quantitative limitations in approaches being used. This review addresses knowledge gained and current limitations and challenges that remain.
Journal Article