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"Zhang, Duoli"
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Anoikis resistance––protagonists of breast cancer cells survive and metastasize after ECM detachment
2023
Breast cancer exhibits the highest global incidence among all tumor types. Regardless of the type of breast cancer, metastasis is a crucial cause of poor prognosis. Anoikis, a form of apoptosis initiated by cell detachment from the native environment, is an outside-in process commencing with the disruption of cytosolic connectors such as integrin-ECM and cadherin-cell. This disruption subsequently leads to intracellular cytoskeletal and signaling pathway alterations, ultimately activating caspases and initiating programmed cell death. Development of an anoikis-resistant phenotype is a critical initial step in tumor metastasis. Breast cancer employs a series of stromal alterations to suppress anoikis in cancer cells. Comprehensive investigation of anoikis resistance mechanisms can inform strategies for preventing and regressing metastatic breast cancer. The present review first outlines the physiological mechanisms of anoikis, elucidating the alterations in signaling pathways, cytoskeleton, and protein targets that transpire from the outside in upon adhesion loss in normal breast cells. The specific anoikis resistance mechanisms induced by pathological changes in various spatial structures during breast cancer development are also discussed. Additionally, the genetic loci of targets altered in the development of anoikis resistance in breast cancer, are summarized. Finally, the micro-RNAs and targeted drugs reported in the literature concerning anoikis are compiled, with keratocin being the most functionally comprehensive.
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Video Abstract
Journal Article
Interactions Between Invasive Plants and Native Plants on the Northern Coast of China and Their Implications for Ecological Restoration
2025
Spartina alterniflora has become one of the most serious invasive species and competes with native Phragmites australis and Suaeda salsa in northern China. This study conducted controlled container experiments with no competition, intraspecific competition, two-species competition, and three-species competition to compare the growth conditions of Spartina alterniflora (ramet, genet, and mixture), Phragmites australis, and Suaeda salsa. Results showed the following: (1) Spartina alterniflora exhibited obviously stronger interspecific competitiveness than that interspecific competition (RYab > 1), with significant differences in height, basal diameter, number of blades, fresh weight, and dry weight (p < 0.05); (2) among reproductive strategies, Spartina alterniflora competitiveness followed the order of ramets > genets > mixture; (3) under multispecies competition, height, basal diameter, and number of blades of Spartina alterniflora showed significant differences (p < 0.05); (4) the competitiveness of Spartina alterniflora in height, basal diameter, and number of blades on native species followed the order Suaeda salsa > Phragmites > Suaeda salsa + Phragmites > competition > no competition. This study suggests the following: (1) controlling established ramets should be prioritized; (2) genet seedlings should be removed within the same year; (3) monitoring of genets should be strengthened. Furthermore, container conditions in this study may not fully capture field environments. Future research should integrate long-term field experiments, tidal gradients, and nutrient manipulations.
Journal Article
Hepatic UGT2B-Mediated Testosterone Clearance Promotes Lipid Accumulation in High-Fat-Diet-Induced MASLD
2026
Background and Objective: Male individuals diagnosed with metabolic dysfunction-associated steatotic liver disease (MASLD) frequently present with decreased blood testosterone concentrations concomitant with increased levels of hepatic cholesterol, the fundamental substrate for testosterone synthesis; however, the mechanistic relationship between these phenomena remains inadequately elucidated. This study aimed to examine the involvement of hepatic cholesterol biosynthesis and testosterone metabolism in the pathogenesis of MASLD. Methods: An MASLD model was established in male C57BL/6J mice subjected to a high-fat diet (HFD). Comprehensive analyses, including hepatic transcriptomics, metabolomics, enzyme-linked immunosorbent assay, Western blotting, and quantitative polymerase chain reaction, were conducted. Additionally, in vitro experiments were performed using AML-12 hepatocytes treated with oleic acid and testosterone, with or without the presence of a uridine diphosphate-glucuronosyltransferase family 2 member B (UGT2B) enzyme inhibitor. Results: The HFD elevated cholesterol levels and activated cholesterol synthesis and testosterone metabolic pathways, notably characterized by upregulation of UGT2B enzymes and their transcriptional regulator, the aryl hydrocarbon receptor (AHR). Blood testosterone increased initially but decreased after 24 weeks of HFD. In vitro, testosterone alone did not affect oleic acid-induced lipid accumulation, but inhibiting UGT2B enabled testosterone levels to reduce lipid deposition and downregulate lipid uptake and synthesis pathways. Conclusions: The HFD induces dynamic, UGT2B-mediated hepatic testosterone metabolism. Compensatory early testosterone increase is offset by enhanced UGT2B-mediated clearance, resulting in eventual testosterone depletion and the loss of its protective effects against hepatic lipid accumulation. This explains the clinical paradox and suggests targeting the hepatic UGT2B enzymes as a potential MASLD treatment.
Journal Article
Identification of tumor stemness and immunity related prognostic factors and sensitive drugs in head and neck squamous cell carcinoma
2024
The presence of cancer stem cells (CSCs) contributes significantly to treatment resistance in various cancers, including head and neck squamous cell carcinoma (HNSCC). Despite this, the relationship between cancer stemness and immunity remains poorly understood. In this study, we aimed to identify potential immunotherapeutic targets and sensitive drugs for CSCs in HNSCC. Using data from public databases, we analyzed expression patterns and prognostic values in HNSCC. The stemness index was calculated using the single-sample gene set enrichment analysis (ssgsea) algorithm, and weighted gene co-expression network analysis (WGCNA) was employed to screen for key stemness-related modules. Consensus clustering was then used to group samples for further analysis, and prognosis-related key genes were identified through regression analysis. Our results showed that tumor samples from HNSCC exhibited higher stemness indices compared to normal samples. WGCNA identified a module highly correlated with stemness, comprising 187 genes, which were significantly enriched in protein digestion and absorption pathways. Furthermore, we identified sensitive drugs targeting prognostic genes associated with tumor stemness. Notably, two genes, HLF and CCL11, were found to be highly associated with both stemness and immunity. In conclusion, our study identifies a stemness-related gene signature and promising drug candidates for CSCs of HNSCC. Additionally, HLF and CCL11, which are associated with both stemness and immunity, represent potential targets for immunotherapy in HNSCC.
Journal Article
Molecular profiling of core immune-escape genes highlights LCK as an immune-related prognostic biomarker in melanoma
2022
The tumor microenvironment is complicated and continuously evolving. This study was devoted to the identification of potential prognostic biomarkers based on the tumor microenvironment associated with immunotherapy for melanoma. This study integrates a couple of melanoma single cell and transcriptome sequencing datasets and performs a series of silico analyses as nicely as validation of molecular biology techniques. A core set of immune escape related genes was identified through Lawson et al. and the ImmPort portal. The differential proteins were identified through the cBioPortal database. Regression analysis was used to profile independent prognostic factors. Correlation with the level of immune cell infiltration was evaluated by multiple algorithms. The capacity of LCK to predict response was assessed in two independent immunotherapy cohorts. High LCK expression is associated with better prognosis, high levels of TILs and better clinical staging. Pathway analysis showed that high expression of LCK was significantly associated with activation of multiple tumor pathways as well as immune-related pathways. LCK expression tends to be higher in immunotherapy-responsive patients and those with lower IC50s treated with chemotherapeutic agents. RT-qPCR detected that LCK expression was significantly upregulated in melanoma cell lines. Single-cell transcriptome analysis showed that LCK was specifically highly expressed on T cells. CellChat analysis confirmed that LCK in C2 subpopulations and T cell subpopulations exerted immune promotion between cells by binding to CD8 receptors. In conclusion, LCK is a reliable biomarker for melanoma and will contribute to its immunotherapy.
Journal Article
Complex interaction and heterogeneity among cancer stem cells in head and neck squamous cell carcinoma revealed by single-cell sequencing
2022
BackgroundCancer stem cells (CSCs) have been characterized to be responsible for multidrug resistance, metastasis, recurrence, and immunosuppressive in head and neck squamous cell carcinoma (HNSCC). However, the diversity of CSCs remains to be investigated. In this study, we aimed to determine the heterogeneity of CSCs and its effect on the formation of tumor microenvironment (TME).MethodsWe depicted the landscape of HNSCC transcriptome profile by single-cell RNA-sequencing analysis of 20 HNSCC tissues from public databases, to reveal the Cell components, trajectory changes, signaling network, malignancy status and functional enrichment of CSCs within tumors.ResultsImmune checkpoint molecules CD276, LILRB2, CD47 were significantly upregulated in CSCs, enabling host antitumor response to be weakened or damaged. Notably, naive CSCs were divided to 2 different types of cells with different functions, exhibiting functional diversity. In addition, CSCs underwent self-renewal and tumor metastasis activity through WNT and ncWNT signaling. Among them, Regulon regulators (IRF1_394g, IRF7_160g, NFKB1_12g, NFKB2_33g and STAT1_356g) were activated in subgroups 2 and 3, suggesting their pivotal roles in the inflammatory response process in tumors. Among all CSCs, naive CSCs appear to be the most malignant resulting in a worse prognosis.ConclusionsOur study reveals the major signal transduction and biological function of CSCs during HNSCC progression, highlighting the heterogeneity of CSCs and their underlying mechanisms in the formation of an immunosuppressive TME. Therefore, our study about heterogeneity of CSCs in HNSCC can bring new insights for the treatment of HNSCC.
Journal Article
Sema4D silencing increases the sensitivity of nivolumab to B16-F10 resistant melanoma via inhibiting the PI3K/AKT signaling pathway
2023
Melanoma is a common skin tumor that causes a high rate of mortality, especially in Europe, North America and Oceania. Immunosuppressants such as anti-PD-1 have been used in the treatment of malignant melanoma, however, nearly 60% of patients do not respond to these treatments. Sema4D, also called CD100, is expressed in T cells and tumor tissues. Sema4D and its receptor, Plexin-B1, play crucial roles in the process of immune regulation, angiogenesis, and tumor progression. The role of Sema4D in melanoma with anti-PD-1 resistance is poorly understood. Through a combination of molecular biology techniques and in silico analysis, the role of Sema4D in improving anti-PD-L1 sensitivity in melanoma was explored. The results showed that the expression of Sema4D, Plexin-B1 and PD-L1 was significantly increased in B16-F10R cells. Sema4D knockdown synergizes with anti-PD-1 treatment, cell viability, cell invasion and migration were significantly decreased, while the apoptosis was increased, the growth of tumors on the mice was also inhibited. Mechanistically, bioinformatics analysis revealed that Sema4D is involved in the PI3K/AKT signaling pathway; the downregulation of p-PI3K/PI3K and p-AKT/AKT expression were observed in Sema4D knockdown, therefore, nivolumab resistance is related to Sema4D and Sema4D silencing can improve sensitivity to nivolumab via inhibition of the PI3K/AKT signaling pathway.
Journal Article
Transcriptomic characterization revealed that METTL7A inhibits melanoma progression via the p53 signaling pathway and immunomodulatory pathway
2023
METTL7A is a protein-coding gene expected to be associated with methylation, and its expression disorder is associated with a range of diseases. However, few research have been carried out to explore the relationship between METTL7A and tumor malignant phenotype as well as the involvement potential mechanism. We conducted our research via a combination of silico analysis and molecular biology techniques to investigate the biological function of METTL7A in the progression of cancer. Gene expression and clinical information were extracted from the TCGA database to explore expression variation and prognostic value of METTL7A. In vitro , CCK8, transwell, wound healing and colony formation assays were conducted to explore the biological functions of METT7A in cancer cell. GSEA was performed to explore the signaling pathway involved in METTL7A and validated via western blotting. In conclusion, METTL7A was downregulated in most cancer tissues and its low expression was associated with shorter overall survival. In melanoma, METTL7A downregulation was associated with poorer clinical staging, lower levels of TIL infiltration, higher IC50 levels of chemotherapeutic agents, and poorer immunotherapy outcomes. QPCR results confirm that METTL7A is down-regulated in melanoma cells. Cell function assays showed that METTL7A knockdown promoted proliferation, invasion, migration and clone formation of melanoma cells. Mechanistic studies showed that METTL7A inhibits tumorigenicity through the p53 signaling pathway. Meanwhile, METTL7A is also a potential immune regulatory factor.
Journal Article
Design and Implementation of a Dynamic Task Mapping Algorithm Based on Hotspot Statistics
2022
In a coarse-grained heterogeneous multi-core system, the task map is responsible for allocating the cores for task execution. The existing user static mapping method has low programming friendliness. As the scale and density of system tasks increase, so does the complexity of manual programming by users, resulting in programming inefficiencies. Aiming at this problem, based on the existing heterogeneous multi-core platform, this paper studies a dynamic task mapping method with hotspot statistics, and uses the preprocessing of the mapping to reduce the time spent on the actual mapping. The hardware mapper is designed and implemented in Verilog, and the verification platform is built in the HDL environment. The experimental results show that the new mapping algorithm significantly improves the performance of the system, with an average of 32.50% and a maximum of 47.16%.
Journal Article
A low-latency DMM-1 encoder for 3D-HEVC
2020
Depth modeling mode 1 (DMM-1) is vital for 3D high-efficiency video coding, since it results in low distortion and is suitable for sharp boundaries. When designing DMM-1 encoders, traditional work used serial methods to calculate all the wedgelets, leading to large latency; they may meet the requirements of 30 fps 1080P 3D video at most, but may be powerless for higher frame rate or 3D video resolution. In this paper, we propose a flexible parallel architecture for DMM-1 encoder. It can simultaneously evaluate all the wedgelets, saving encoding time without increasing distortion; it can also be configured into a partial-parallel architecture to save area. Experiments show that our method can save 33.6–94.3% encoding time for different test schemes. Synthesis results in SMIC 55 nm show that the VLSI design for proposed parallel architecture can meet the requirements of 1080P and higher-resolution video processing in real time.
Journal Article