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Background Detecting organ and tissue damage is essential for early diagnosis, treatment decisions, and monitoring disease progression. Methylation-based assays offer a promising approach, as DNA methylation patterns can change in response to tissue damage. These assays have potential applications in early detection, monitoring disease progression, evaluating treatment efficacy, and assessing organ viability for transplantation. cfDNA released into the bloodstream upon tissue or organ injury can serve as a biomarker for damage. The epigenetic state of cfDNA, including DNA methylation patterns, can provide insights into the extent of tissue and organ damage. Content Firstly, this review highlights DNA methylation as an extensively studied epigenetic modification that plays a pivotal role in processes such as cell growth, differentiation, and disease development. It then presents a variety of highly precise 5-mC methylation detection techniques that serve as powerful tools for gaining profound insights into epigenetic alterations linked with tissue damage. Subsequently, the review delves into the mechanisms underlying DNA methylation changes in organ and tissue damage, encompassing inflammation, oxidative stress, and DNA damage repair mechanisms. Next, it addresses the current research status of cfDNA methylation in the detection of specific organ tissues and organ damage. Finally, it provides an overview of the multiple steps involved in identifying specific methylation markers associated with tissue and organ damage for clinical trials. Summary This review will explore the mechanisms and current state of research on cfDNA methylation-based assay detecting organ and tissue damage, the underlying mechanisms, and potential applications in clinical practice.

Ischemia-reperfusion (I/R) is a pathological process that occurs in many organs and diseases. Reperfusion, recovery of blood flow, and reoxygenation often lead to reperfusion injury. Drug therapy and early reperfusion therapy can reduce tissue injury and cell necrosis caused by ischemia, leading to irreversible I/R injury. Ferroptosis was clearly defined in 2012 as a newly discovered iron-dependent, peroxide-driven, nonapoptotic form of regulated cell death. Ferroptosis is considered the cause of reperfusion injury. This discovery provides new avenues for the recognition and treatment of diseases. Ferroptosis is a key factor that leads to I/R injury and organ failure. Given the important role of ferroptosis in I/R injury, there is considerable interest in the potential role of ferroptosis as a targeted treatment for a wide range of I/R injury-related diseases. Recently, substantial progress has been made in applying ferroptosis to I/R injury in various organs and diseases. The development of ferroptosis regulators is expected to provide new opportunities for the treatment of I/R injury. Herein, we analytically review the pathological mechanism and targeted treatment of ferroptosis in I/R and related diseases from the perspectives of myocardial I/R injury, cerebral I/R injury, and ischemic renal injury.

The reduction of carbon emissions from the energy industry chain and the coordinated development of the energy supply chain have attracted widespread attention. This paper conducts a systematic review of the existing literature on the energy industry chain and energy supply chain. Based on the analytical results, this paper finds that research gaps exist in the studies of energy consumption structure and resource consumption in energy industry chain. In addition, the studies of coordinated operation mechanisms, risk control and the impact of government policies on the energy supply chain still have some shortcomings. Furthermore, this paper shows that the exploitation and utilization of renewable energy and the sustainable development of the energy industry chain and supply chain have become the major focus of scholars and governments in recent years. Accordingly, this article finally presents the future research prospects and provides managerial insights for policy makers and enterprise managers to accelerate the development of renewable energy resources and to achieve green, low-carbon, coordinated and sustainable development.

The traditional herb medicine Ferula sinkiangensis K. M. Shen (F. sinkiangensis) has been used to treat stomach disorders in Xinjiang District for centuries. Umbelliprenin is the effective component isolated from F. sinkiangensis which is particularly found in plants of the family Ferula. We previously reported the promising effects of Umbelliprenin against gastric cancer cells, but its anti-migration effect remained unknown. Here we investigated the anti-migration effect and mechanism of Umbelliprenin in human gastric cancer cells. In SRB assay, Umbelliprenin showed cytotoxic activities in the gastric cancer cell lines AGS and BGC-823 in a dose-and-time-dependent manner, while it showed lower cytotoxic activity in the normal gastric epithelium cell line GES-1. During transwell, scratch and colony assays, the migration of tumor cells was inhibited by Umbelliprenin treatment. In gelatin zymography assay, Umbelliprenin could inhibit the expression of MMP2 and MMP9 in tumor cells The expression levels of the Wnt-associated signaling pathway proteins were analyzed with western blots, and the results showed that Umbelliprenin decreased the expression levels of proteins of the Wnt signalling pathway, such as Wnt-2, β-catenin, GSK-3β, p-GSK-3β, Survivin and c-myc. The translocation of β-catenin to the nucleus was also inhibited by Umbelliprenin treatment. In TCF reporter assay, the transcriptional activity of T-cell factor/lymphoid enhancer factor (TCF/LEF) was decreased after Umbelliprenin treatment. The in vivo results suggested that Umbelliprenin induced little to no harm in the lung, heart and kidney. Overall, these data provided evidence that Umbelliprenin may inhibit the growth, invasion and migration of gastric cancer cells by disturbing the Wnt signaling pathway.

Recently, the discovery of organometallic halide perovskites provides promising routes for fabricating optoelectronic devices with low cost and high performance. Previous experimental studies of MAPbI 3 optoelectronic devices, such as photodetectors and solar cells, are normally based on polycrystalline films. In this work, a high-performance planar-type photodetector fabricated on the (100) facet of a MAPbI 3 single crystal is proposed. We demonstrate that MAPbI 3 photodetector based on single crystal can perform much better than that on polycrystalline-film counterpart. The low trap density of MAPbI 3 single crystal accounts for the higher carrier mobility and longer carrier diffusion length, resulted in a significant performance increasement of MAPbI 3 photodetector. Compared with similar planar-type photodetectors based on MAPbI 3 polycrystalline film, our MAPbI 3 single crystal photodetector showed excellent performance with good stability and durability, broader response spectrum to near-infrared region, about 10 2 times higher responsivity and EQE and approximately 10 3 times faster response speed. These results may pave the way for exploiting high-performance perovskites photodetectors based on single crystal.

Background Peanut seeds exhibit a high susceptibility to infection by Aspergillus flavus ( A. flavus ) post-harvest, which significantly limits their storage and marketability. The peanut seed coat acts as a crucial barrier against A. flavus , containing abundant flavonoids. Despite ongoing research, a comprehensive understanding of the inhibitory effects of flavonoids present in peanut seed coats on A. flavus remains elusive. Results This study reveals significant differences in antioxidant activities and resistance to A. flavus among seed coat extracts from different peanut cultivars. A total of 1,314 metabolites were identified through untargeted metabolomics, among which flavonoids enhance both antioxidant activity and pigmentation in the seed coat. Compounds such as anthocyanins, aurones, and chalcones were strongly associated with increased resistance to A. flavus . Notably, cyanidin-3-O-sophoroside exhibited the highest concentration (10.83 mg/g dry weight) and demonstrated a minimum inhibitory concentration (MIC) of 50 µg/mL. By integrating transcriptomic and metabolomic data, we revealed candidate genes and metabolic pathways potentially associated with anthocyanin biosynthesis. Conclusions This study provides novel insights into the biochemical mechanisms underlying peanut resistance to A. flavus , while also supporting the valorization of peanut by-products and the breeding of resistant cultivars.

Pigs are valuable large animal models for biomedical and genetic research, but insights into the tissue- and cell-type-specific transcriptome and heterogeneity remain limited. By leveraging single-cell RNA sequencing, we generate a multiple-organ single-cell transcriptomic map containing over 200,000 pig cells from 20 tissues/organs. We comprehensively characterize the heterogeneity of cells in tissues and identify 234 cell clusters, representing 58 major cell types. In-depth integrative analysis of endothelial cells reveals a high degree of heterogeneity. We identify several functionally distinct endothelial cell phenotypes, including an endothelial to mesenchymal transition subtype in adipose tissues. Intercellular communication analysis predicts tissue- and cell type-specific crosstalk between endothelial cells and other cell types through the VEGF , PDGF , TGF-β , and BMP pathways. Regulon analysis of single-cell transcriptome of microglia in pig and 12 other species further identifies MEF2C as an evolutionally conserved regulon in the microglia. Our work describes the landscape of single-cell transcriptomes within diverse pig organs and identifies the heterogeneity of endothelial cells and evolutionally conserved regulon in microglia. Pigs are important large animal models for biomedical research. Here, the authors construct a single-cell landscape of pig tissues, unravelling the phenotypic heterogeneity of blood endothelial cells in adipose tissues and the evolutionally conserved regulons of microglia in brains.

Berberine (BBR), an important quaternary benzylisoquinoline alkaloid, has been used in Chinese traditional medicine for over 3,000 years. BBR has been shown in both traditional and modern medicine to have a wide range of pharmacological actions, including hypoglycemic, hypolipidemic, anti-obesity, hepatoprotective, anti-inflammatory, and antioxidant activities. The unregulated reaction chain induced by oxidative stress as a crucial mechanism result in myocardial damage, which is involved in the pathogenesis and progression of many cardiovascular diseases (CVDs). Numerous researches have established that BBR protects myocardium and may be beneficial in the treatment of CVDs. Given that the pivotal role of oxidative stress in CVDs, the pharmacological effects of BBR in the treatment and/or management of CVDs have strongly attracted the attention of scholars. Therefore, this review sums up the prevention and treatment mechanisms of BBR in CVDs from in vitro , in vivo , and finally to the clinical field trials timely. We summarized the antioxidant stress of BBR in the management of coronary atherosclerosis and myocardial ischemia/reperfusion; it also analyzes the pathogenesis of oxidative stress in arrhythmia and heart failure and the therapeutic effects of BBR. In short, BBR is a hopeful drug candidate for the treatment of CVDs, which can intervene in the process of CVDs from multiple angles and different aspects. Therefore, if we want to apply it to the clinic on a large scale, more comprehensive, intensive, and detailed researches are needed to be carried out to clarify the molecular mechanism and targets of BBR.

Obesity is a chronic metabolic disease caused by genetic and environmental factors that has become a serious global health problem. There is evidence that gut microbiota is closely related to the occurrence and development of obesity. Erchen Decoction (ECD), a traditional Chinese medicine, has been widely used for clinical treatment and basic research of obesity and related metabolic diseases in recent years. It can significantly improve insulin resistance (IR) and lipid metabolism disorders. However, there is no microbiological study on its metabolic regulation. In this study, we investigated the effects of ECD on obesity, especially lipid metabolism and the composition and function of gut microbiota in Zucker diabetic fatty (ZDF) rats, and explored the correlation between the biomarkers of gut microbiota and metabolite and host phenotype. The results showed that ECD could reduce body weight, improve IR and lipid metabolism, and reduce the concentration of free fatty acids (FFA) released from white adipose tissue (WAT) due to excessive lipolysis by interfering with the insulin receptor substrate 1 (IRS1)/protein kinase B (AKT)/protein kinase A (PKA)/hormone-sensitive triglyceride lipase (HSL) signaling pathway in ZDF rats. Additionally, ECD gradually adjusted the overall structure of changed gut microbiota, reversed the relative abundance of six genera, and changed the function of gut microbiota by reducing the content of propionic acid, a metabolite of gut microbiota, in ZDF rats. A potentially close relationship between biomarkers, especially Prevotella , Blautia , and Holdemania , propionic acid and host phenotypes were demonstrated through correlation analysis. The results suggested that the beneficial effects of ECD on obesity, especially lipid metabolism disorders, are related to the regulation of gut microbiota in ZDF rats. This provides a basis for further research on the mechanism and clinical application of ECD to improve obesity via gut microbiota.

Flammability is a significant challenge in polymer-based strain sensing applications. In addition, the existing intrinsic flame retardant is not elastic at room temperature, which may potentially damage the flexible equipment. This study presents a series of flame-retardant ionic conductive elastomers (ICEs) (denoted as PCAIPx) containing phosphorus from phytic acid (PA) and nitrogen from choline chloride (ChCl) with multiple hydrogen bonds synthesized using a simple and efficient one-pot UV-initiated radical copolymerization of a polymerizable deep eutectic solvent (PDES). The limiting oxygen index (LOI) value increased from 24.1% for the pure PCAI without PA to 38.3% for PCAIP7.5. The SEM analysis of the residual char shows that the formation of the dense and continuous char layer effectively worked as a shield, preventing further decomposition of the undecomposed polymer inside while hindering the transmission of heat and mass and isolating the oxygen required for combustion. The hydrogen bonds’ cross-linked structure and phosphorus-containing elastomer demonstrate a superior elasticity (elongation at break of up to 2109%), durability, and tear resistance and excellent adhesive properties. Application of PCAIPX in strain sensors showed that the elastomer has excellent cyclic stability and exhibited repeatable and stable resistance change signals in response to repetitive bending motions of the wrist, fingers, elbow, and knee. Consequently, this study provides a simple strategy for the development of a flame-retardant ICE which can effectively reduce fire hazards and potentially be applied in other fire-risk fields such as personal protection, firefighting, and sports equipment.