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result(s) for
"Zhang, Yalu"
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Long noncoding RNA: a dazzling dancer in tumor immune microenvironment
2020
Long noncoding RNAs (lncRNAs) are a class of endogenous, non-protein coding RNAs that are highly linked to various cellular functions and pathological process. Emerging evidence indicates that lncRNAs participate in crosstalk between tumor and stroma, and reprogramming of tumor immune microenvironment (TIME). TIME possesses distinct populations of myeloid cells and lymphocytes to influence the immune escape of cancer, the response to immunotherapy, and the survival of patients. However, hitherto, a comprehensive review aiming at relationship between lncRNAs and TIME is missing. In this review, we focus on the functional roles and molecular mechanisms of lncRNAs within the TIME. Furthermore, we discussed the potential immunotherapeutic strategies based on lncRNAs and their limitations.
Journal Article
CD58 Immunobiology at a Glance
by
Zhang, Yalu
,
Liao, Quan
,
Liu, Qiaofei
in
Amino acids
,
Antigens
,
Antigens, Neoplasm - immunology
2021
The glycoprotein CD58, also known as lymphocyte-function antigen 3 (LFA-3), is a costimulatory receptor distributed on a broad range of human tissue cells. Its natural ligand CD2 is primarily expressed on the surface of T/NK cells. The CD2-CD58 interaction is an important component of the immunological synapse (IS) that induces activation and proliferation of T/NK cells and triggers a series of intracellular signaling in T/NK cells and target cells, respectively, in addition to promoting cell adhesion and recognition. Furthermore, a soluble form of CD58 (sCD58) is also present in cellular supernatant in vitro and in local tissues in vivo . The sCD58 is involved in T/NK cell-mediated immune responses as an immunosuppressive factor by affecting CD2-CD58 interaction. Altered accumulation of sCD58 may lead to immunosuppression of T/NK cells in the tumor microenvironment, allowing sCD58 as a novel immunotherapeutic target. Recently, the crucial roles of costimulatory molecule CD58 in immunomodulation seem to be reattracting the interests of investigators. In particular, the CD2-CD58 interaction is involved in the regulation of antiviral responses, inflammatory responses in autoimmune diseases, immune rejection of transplantation, and immune evasion of tumor cells. In this review, we provide a comprehensive summary of CD58 immunobiology.
Journal Article
Recent advances in research on vine tea, a potential and functional herbal tea with dihydromyricetin and myricetin as major bioactive compounds
2021
Vine tea has been used as an herbal tea by several ethnic minorities for hundreds of years in China. Flavonoids, a kind of indispensable component in a variety of nutraceutical, pharmaceutical and cosmetic applications, are identified to be the major metabolites and bioactive ingredients in vine tea. Interestingly, vine tea exhibits a wide range of significant bioactivities including anti-oxidant, anti-inflammatory, anti-tumor, antidiabetic, neuroprotective and other activities, but no toxicity. These bioactivities, to some extent, enrich the understanding about the role of vine tea in disease prevention and therapy. The health benefits of vine tea, particularly dihydromyricetin and myricetin, are widely investigated. However, there is currently no comprehensive review available on vine tea. Therefore, this report summarizes the most recent studies investigating bioactive constituents, pharmacological effects and possible mechanisms of vine tea, which will provide a better understanding about the health benefits and preclinical assessment of novel application of vine tea.
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•Vine tea has been consumed as a folk herbal tea for hundreds of years.•Flavonoids were the major bioactive ingredients in vine tea.•Dihydromyricetin and myricetin are major bioactives in vine tea.•Vine tea exhibits a wide range of significant bioactivities.•Vine tea may be a potential, functional herbal tea.
Journal Article
Modulating ferroptosis sensitivity: environmental and cellular targets within the tumor microenvironment
2024
Ferroptosis, a novel form of cell death triggered by iron-dependent phospholipid peroxidation, presents significant therapeutic potential across diverse cancer types. Central to cellular metabolism, the metabolic pathways associated with ferroptosis are discernible in both cancerous and immune cells. This review begins by delving into the intricate reciprocal regulation of ferroptosis between cancer and immune cells. It subsequently details how factors within the tumor microenvironment (TME) such as nutrient scarcity, hypoxia, and cellular density modulate ferroptosis sensitivity. We conclude by offering a comprehensive examination of distinct immunophenotypes and environmental and metabolic targets geared towards enhancing ferroptosis responsiveness within the TME. In sum, tailoring precise ferroptosis interventions and combination strategies to suit the unique TME of specific cancers may herald improved patient outcomes.
Journal Article
Revealing Long-Term Indoor Air Quality Prediction: An Intelligent Informer-Based Approach
2023
Indoor air pollution is an urgent issue, posing a significant threat to the health of indoor workers and residents. Individuals engaged in indoor occupations typically spend an average of around 21 h per day in enclosed spaces, while residents spend approximately 13 h indoors on average. Accurately predicting indoor air quality is crucial for the well-being of indoor workers and frequent home dwellers. Despite the development of numerous methods for indoor air quality prediction, the task remains challenging, especially under constraints of limited air quality data collection points. To address this issue, we propose a neural network capable of capturing time dependencies and correlations among data indicators, which integrates the informer model with a data-correlation feature extractor based on MLP. In the experiments of this study, we employ the Informer model to predict indoor air quality in an industrial park in Changsha, Hunan Province, China. The model utilizes indoor and outdoor temperature, humidity, and outdoor particulate matter (PM) values to forecast future indoor particle levels. Experimental results demonstrate the superiority of the Informer model over other methods for both long-term and short-term indoor air quality predictions. The model we propose holds significant implications for safeguarding personal health and well-being, as well as advancing indoor air quality management practices.
Journal Article
Retinol binding protein 4 enhances cellular cholesterol uptake to facilitate influenza A virus infection
by
Zhang, Yalu
,
Liu, Wenjun
,
Shang, Yingli
in
Animals
,
Biology and life sciences
,
CD36 Antigens - genetics
2025
Viruses hijack host cell machinery to facilitate their own replication. Therefore, identifying key cellular factors and processes involved in viral infection is crucial for developing host-directed therapies. Herein, we demonstrate that retinol-binding protein 4 (RBP4), a lipocalin family member and major retinol carrier, is significantly induced by influenza A virus (IAV) infection in both cellular models and clinical patients. Moreover, RBP4 deficiency impairs IAV replication both in vitro and in vivo . Mechanistically, RBP4 promotes the expression of CD36, a cholesterol uptake receptor protein, thereby increasing cellular cholesterol levels. This elevation in cholesterol subsequently boosts cell-surface sialic acid levels, facilitating IAV attachment. Consequently, enforced expression of CD36 restores IAV replication in RBP4-deficient cells and mice. In summary, our study identifies RBP4 as a pivotal host factor that facilitates IAV infection by modulating cellular cholesterol homeostasis.
Journal Article
Responses of Soil Organic/Inorganic Carbon Concentrations in the Lower Yangtze River to Soil Development and Land Use
2025
Understanding the evolution and regulation of soil carbon (C) across different stages of geological development is essential for elucidating soil’s role in C storage and release processes. In this study, 1029 soil samples were collected from the alluvial layers of the lower Yangtze River. The chemical index of alteration (CIA) was employed to establish a gradient sequence of soil development, facilitating an investigation into the evolution of organic carbon (OC) and inorganic carbon (IC) in both surface and deep layers across various development stages, as well as their influencing factors. The results demonstrated that as soil develops, surface OC content increases significantly, while the deep layer exhibits no substantial changes. Notably, IC loss was particularly pronounced in surface soils, decreasing from 4.90 g/kg to 0.07 g/kg. Furthermore, the impacts of land use were more evident during the early stages of soil development. Paddy–dryland rotation (paddies) was found to enhance OC sequestration while maintaining IC levels comparable to those of drylands. Soil development directly influenced IC content, whereas its effect on OC content at different depths was primarily mediated by changes in the zirconium-to-rubidium (Zr/Rb) ratios and metal cation concentrations. This study highlights that OC accumulation during soil development predominantly occurs in surface layers, while IC leaching can also be detected at greater depths. At highly developed sites, paddies are recommended as beneficial for preserving C reserves.
Journal Article
Particle size characteristics of surface sediments and their environmental significance: a comparative study of deserts in arid western Inner Mongolia, China
2020
Based on the analysis of particle size mechanical composition and parameter distribution of surface sediments in the Hobq Desert (HD), the Ulan Buh Desert (UBD) and the northern part of the Mu Us Desert (MUD) in western Inner Mongolia, and combining the sedimentary environment discrimination method and the particle size lognormal fitting method, this research compares and explores the particle size characteristics and the significance of sensitive components in the sedimentary environment to the provenance in the three deserts. The results are shown as follows: (1) Sediment samples in the HD are dominated by fine sand (48.9%), in the UBD by fine sand and medium sand (41.10% and 42.90%, respectively) and in the MUD by medium sand (41.62%). (2) σ1 and SK1 in the HD and the UBD are well sorted and symmetric, but are averagely sorted and show highly positive skewness in the MUD. (3) The sediment samples in the HD and the UBD are mainly aeolian sediments, with lacustrine sediments being secondary. By contrast, the sediment samples in MUD is largely made up of lacustrine deposits. (4) By fitting the particle size frequency curves of all samples, five components, namely C1, C2, C3, C4 and C5 ranging from fineness to coarseness, are obtained. It is also indicated that the sediments in the study area do not undergo a wide range of mixing, but mainly experience in situ sedimentation. The most of these sediments may belong to lakeshore deposits that have been modified by wind for a long time, and are accompanied by long-distance westerly dust, weathered debris from bedrock, and active paleosand dunes of riverbed sediments.
Journal Article
Upregulated CD58 is associated with clinicopathological characteristics and poor prognosis of patients with pancreatic ductal adenocarcinoma
by
Zhang, Yalu
,
Liu, Jingkai
,
Liao, Quan
in
Adenocarcinoma
,
Biomedical and Life Sciences
,
Biomedicine
2021
Background
CD58 has been demonstrated to be abnormally expressed in multiple hematopoietic malignancies and solid tumors and plays an essential role in tumorigenesis and progression; however, its clinical significance and prognostic value in pancreatic ductal adenocarcinoma (PDAC) remain unknown.
Methods
Based on diverse online public databases and 81 PDAC samples of tissue microarray-based immunohistochemistry (IHC), we evaluated CD58 expression in PDAC patients and analyzed its association with clinicopathological characteristics, clinical outcomes, and infiltration of immune cells in PDAC. Furthermore, the correlation between CD58 and the cancer stem cell (CSC)-related, epithelial–mesenchymal transition (EMT)-related, and immune-related markers were detected. Besides, the functional enrichment analysis and related pathways were analyzed and visualized.
Results
CD58 expression was elevated in pancreatitis and PDAC tissues than normal pancreas or adjacent nontumor tissues. The positive cases of CD58 (e.g. more than 50% positive cells) in PDAC account for 95.06% (77/81). Upregulated CD58 in cancer tissues was associated with worse histological grade, larger tumor size, and poorer overall survival and disease-free survival in PDAC patients. Furthermore, Cox multivariate regression analysis revealed that CD58 was an independent prognostic factor in PDAC. CD58 expression was correlated with infiltrations of neutrophils, CD8
+
T cells, and dendritic cells (DCs). In addition, correlation gene analysis indicated that CD58 expression was strongly correlated with immune-related, EMT-related, and CSC-related markers. Functional enrichment analysis and KEGG pathway manifested that CD58 might be involved in PDAC initiation and progression.
Conclusions
CD58 expression is upregulated in PDAC tissues and its high expression is notably related to poor survival of PDAC. Therefore, CD58 may serve as a novel and effective marker for predicting the prognosis of PDAC patients.
Journal Article
Comprehensive Analysis of Expression, Prognostic Value, and Immune Infiltration for Ubiquitination-Related FBXOs in Pancreatic Ductal Adenocarcinoma
by
Zhang, Yalu
,
Liao, Quan
,
Hua, Surong
in
1-Phosphatidylinositol 3-kinase
,
Adenocarcinoma
,
AKT protein
2022
Pancreatic ductal adenocarcinoma (PDAC) is one of the most refractory human malignancies. F-box only proteins (FBXO) are the core components of SKP1-cullin 1-F-box E3 ubiquitin ligase, which have been reported to play crucial roles in tumor initiation and progression via ubiquitination-mediated proteasomal degradation. However, the clinical implications and biological functions of FBXOs in PDAC have not been fully clarified. Herein we perform a comprehensive analysis for the clinical values and functional roles of FBXOs in PDAC using different public databases. We found that FBXO1 (CCNF), FBXO20 (LMO7), FBXO22, FBXO28, FBXO32, and FBXO45 (designated six-FBXOs) were robustly upregulated in PDAC tissues, which predicted an adverse prognosis of PDAC patients. There was a significant correlation between the expression levels of six-FBXOs and the clinicopathological features in PDAC. The transcriptional levels of six-FBXOs were subjected to the influence of promoter methylation levels. There were more than 40% genetic alterations and mutations of six-FBXOs, which affected the clinical outcome of PDAC patients. Furthermore, the expression of six-FBXOs was associated with immune infiltrations and activated status, including B cells, CD8 + T cells, CD4 + T cells, NK cells, macrophages, and dendritic cells. The functional prediction revealed that the six-FBXOs were involved in ubiquitination-related pathways and other vital signaling pathways, such as p53, PI3K/Akt, and Hippo pathway. Therefore, six-FBXOs are the promising prognostic biomarkers or potential targets for PDAC diagnosis and treatment.
Journal Article