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"Zhu, Pengfei"
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Correction and laboratory investigation for energy loss coefficient of square-edged orifice plate
2021
A lot of studies have shown that the hydraulic characteristics of orifice plate are mainly controlled by its contraction ratio, but the thickness of square-edged orifice plate also has many impacts on energy loss characteristics. The primary objective of this study was to investigated the effects of square-edged orifice plate thickness on energy loss characteristics. In this paper, the effects of square-edged orifice plate thickness on energy loss characteristics are investigated by numerical simulation using CFD. Orifice plate discharge tunnel is axial symmetric, two dimensional numerical simulations of orifice plate discharge tunnel flow was used. The equation (9) for calculating energy loss coefficient of square-edged orifice plate energy dissipater considering the influence of thickness is proposed. The results of the present research demonstrate that energy loss coefficient decreases with increase of the orifice plate thickness. The results of model experiment are consistence with the results calculated by using rectified equation in present paper. The CFD simulations and Model experiment for the flow through an orifice plate are carried out. For square-edged orifice plate energy dissipater, the relative orifice plate thickness T/D has remarkable impacts on its energy loss coefficient 𝜉. The Traditional equation (8) is corrected by numerical results. The equation (9) for calculating energy loss coefficient of square-edged orifice plate energy dissipater considering the influence of thickness is proposed and this equation is available in the condition of 𝑑/𝐷 = 0.4–0.8, 𝑇/𝐷 = 0.05–0.25, and 𝑅𝑒 > 105(Re is Reynolds number). Comparing with the physical model experimental data, the relative errors of equation (9) is smaller than 15%.
Journal Article
Traditional Chinese medicine as a cancer treatment: Modern perspectives of ancient but advanced science
2019
Traditional Chinese medicine (TCM) has been practiced for thousands of years and at the present time is widely accepted as an alternative treatment for cancer. In this review, we sought to summarize the molecular and cellular mechanisms underlying the chemopreventive and therapeutic activity of TCM, especially that of the Chinese herbal medicine‐derived phytochemicals curcumin, resveratrol, and berberine. Numerous genes have been reported to be involved when using TCM treatments and so we have selectively highlighted the role of a number of oncogene and tumor suppressor genes in TCM therapy. In addition, the impact of TCM treatment on DNA methylation, histone modification, and the regulation of noncoding RNAs is discussed. Furthermore, we have highlighted studies of TCM therapy that modulate the tumor microenvironment and eliminate cancer stem cells. The information compiled in this review will serve as a solid foundation to formulate hypotheses for future studies on TCM‐based cancer therapy. In this review, we try to summarize the molecular and cellular mechanisms underlying traditional Chinese medicine treatment from the perspective of gene to cell regulation. In the gene regulation, we emphasize the expression of oncogene and tumor suppressor genes, and epigenetic modifications; in the cell regulation, we highlight the effects of TCM treatment on the cancer stem cells and tumor microenvironment.
Journal Article
Evaluating the effects of urbanization on land use and landscape patterns in southern China (1990–2020)
2025
Evaluating the effects of urbanization on land use and landscape patterns is crucial for protecting resources and promoting environmental sustainability. This study examined urbanization in southern China from 1990 to 2020, focusing on urban area growth, GDP, population density, and the Landscape Expansion Index (LEI). It also assessed the impact on land use and landscape patterns through land use structures and metrics. The results reveal that Urban built-up areas have consistently increased over the past three decades, especially between 2010 and 2020. The extent of urban land increased from 20,758 km² in 1990 to 42,939 km² in 2020, reflecting an average annual growth rate of 3.56%, largely driven by the conversion of cultivated land (74.5%) and forest land (18.4%) compared to other land cover types. This expansion coincided with increased population density and GDP. The LEI also indicates a transition from compact urban growth (1990–2010) to a more dispersed pattern (2010–2020). Landscape metrics indicate decreased dominance of a single land-use type, leading to a more balanced structure and greater fragmentation. This emphasizes the need to tackle urbanization’s environmental challenges and the importance of sustainable development in urban planning for harmonious coexistence.
Journal Article
Species-resolved sequencing of low-biomass or degraded microbiomes using 2bRAD-M
by
Zhu, Pengfei
,
Tzehau, Lam
,
Zhang, Rongchao
in
Accuracy
,
Animal Genetics and Genomics
,
Archaea
2022
Microbiome samples with low microbial biomass or severe DNA degradation remain challenging for amplicon-based or whole-metagenome sequencing approaches. Here, we introduce 2bRAD-M, a highly reduced and cost-effective strategy which only sequences ~ 1% of metagenome and can simultaneously produce species-level bacterial, archaeal, and fungal profiles. 2bRAD-M can accurately generate species-level taxonomic profiles for otherwise hard-to-sequence samples with merely 1 pg of total DNA, high host DNA contamination, or severely fragmented DNA from degraded samples. Tests of 2bRAD-M on various stool, skin, environmental, and clinical FFPE samples suggest a successful reconstruction of comprehensive, high-resolution microbial profiles.
Journal Article
Impact of DNA extraction method and targeted 16S-rRNA hypervariable region on oral microbiota profiling
2018
Amplification and sequencing of 16S amplicons are widely used for profiling the structure of oral microbiota. However, it remains not clear whether and to what degree DNA extraction and targeted 16S rRNA hypervariable regions influence the analysis. Based on a mock community consisting of five oral bacterial species in equal abundance, we compared the 16S amplicon sequencing results on the Illumina MiSeq platform from six frequently employed DNA extraction procedures and three pairs of widely used 16S rRNA hypervariable primers targeting different 16S rRNA regions. Technical reproducibility of selected 16S regions was also assessed. DNA extraction method exerted considerable influence on the observed bacterial diversity while hypervariable regions had a relatively minor effect. Protocols with beads added to the enzyme-mediated DNA extraction reaction produced more accurate bacterial community structure than those without either beads or enzymes. Hypervariable regions targeting V3-V4 and V4-V5 seemed to produce more reproducible results than V1-V3. Neither sequencing batch nor change of operator affected the reproducibility of bacterial diversity profiles. Therefore, DNA extraction strategy and 16S rDNA hypervariable regions both influenced the results of oral microbiota biodiversity profiling, thus should be carefully considered in study design and data interpretation.
Journal Article
Metagenomic next generation sequencing for the diagnosis of tuberculosis meningitis: A systematic review and meta-analysis
by
Zhao, Wuchen
,
Zhu, Pengfei
,
Yu, Guocan
in
Accuracy
,
Biology and Life Sciences
,
Cerebrospinal fluid
2020
Tuberculous meningitis (TBM) is a severe form of extrapulmonary tuberculosis and its early diagnosis is very difficult leading to present with severe disability or die. The current study aimed to assess the accuracy of metagenomic next generation sequencing (mNGS) for TBM, and to identify a new test for the early diagnosis of TBM.
We searched for articles published in Embase, PubMed, Cochrane Library, China National Knowledge Infrastructure, and Wanfang Data up to June 30, 2020 for studies that assessed the efficacy of mNGS for the diagnosis of TBM. Then, the accuracy between mNGS and a composite reference standard (CRS) in these articles was compared using the meta-analysis approach.
Four independent studies with 342 samples comparing mNGS and a CRS were included in this study. The sensitivity of mNGS for TBM diagnosis ranged from 27% to 84%. The combined sensitivity of mNGS was 61%, and the I2 value was 92%. Moreover, the specificity of mNGS for TBM diagnosis ranged from 96% to 100%. The combined specificity of mNGS was 98%, and the I2 value was 74%. The heterogeneity between studies in terms of sensitivity and specificity was significant. The area under the curve (AUC) of the summary receiver operating characteristic curve (SROC) of mNGS for TBM was 0.98.
The sensitivity of mNGS for TBM diagnosis was moderate. Furthermore, the specificity was extremely high, and the AUC of the SROC indicated a very good diagnostic efficacy. mNGS could be used as an early diagnostic method for TBM, however, the results should be treated with caution for the heterogeneity between studies was extremely significant.
INPLASY202070100.
Journal Article
Effects of Antimony Stress on Photosynthesis and Growth of Acorus calamus
by
Sun, Chongyu
,
Zhu, Pengfei
,
Liu, Fei
in
Acorus calamus
,
Antimony
,
Antimony potassium tartrate
2018
This study was aimed to explore that effects of Sb on physiological parameters of
and the possibility of using
as a remediation plant.
potted experiments were conducted using different concentrations (0, 250, 500, 1000, and 2000 mg/kg) of antimony potassium tartrate (Sb
) (marked as CK, T
, T
, T
, and T
, respectively) and potassium pyroantimonate (Sb
) (marked as CK, T'
, T'
, T'
, and T'
, respectively). The effects of Sb stress (Sb
and Sb
) on leaf photosynthetic pigments, biomass, photosynthetic characteristics and chlorophyll fluorescence parameters of potted
were studied. With the rise of Sb
concentration from T
to T
, the leaf pigment contents (chlorophyll a, b, carotenoid), plant height, dry weight, net photosynthetic rate (Pn), stomatal conductance (Gs), evaporation rate (E), PSII maximum photochemical efficiency (Fv/Fm), and PSII electron transfer quantum yield rate (ΦPSII) of
all reduced, while intercellular CO
concentration (Ci) significantly increased. The reduction of Pn was mainly induced by non-stomatal limitation. Chlorophyll a/b ratio increased significantly versus the control, while carotenoid/chlorophyll ratio (Car/Chl) first decreased and then increased. The leaf Chl a, Chl b, Car, plant height, dry weight, Pn, Gs, E, Fv/Fm, and ΦPSII all maximized in T'
(250 mg/kg), but were not significantly different from the control. As the Sb
concentration increased from T'
to T'
, the above indices all decreased and were significantly different from the control. Moreover, intercellular CO
concentration (Ci) decreased significantly. The reduction of Pn was caused by non-stomatal limitation, indicating the mesophyll cells were damaged. The Car/Chl ratio was stable within 0-500 mg/kg Sb, but decreased in T
and T
, and rose in T'
and T'
. After Sb
and Sb
treatments, translocation factor varied 19.44-27.8 and 19.44-24.86%, respectively. In conclusion, different form Sb
treatment, Sb
treatment showed a Hormesi effect, as low-concentration treatment promoted
growth, but high-concentration treatment inhibited its growth. The two forms of Sb both caused unfavorable effects on
, but the seedlings did not die and were modestly adaptive and Sb-accumulative.
, which is easily maintained and cultivated, can serve as a good candidate for phytoremediation of water contaminated with Sb.
Journal Article
Flying Target Detection Technology Based on GNSS Multipath Signals
2024
In this study, a passive radar system that detects flying targets is developed in order to solve the problems associated with traditional flying target detection systems (i.e., their large size, high power consumption, complex systems, and poor battlefield survivability). On the basis of target detection, the system uses the multipath signal (which is usually eliminated as an error term in navigation and positioning), enhances it by supporting information, and utilizes the multi-source characteristics of ordinary omnidirectional global navigation satellite system (GNSS) signals. The results of a validation experiment showed that the system is able to locate a passenger airplane and obtain its flight trajectory using only one GNSS receiving antenna. The system is characterized by its light weight (less than 5 kg), low power consumption, simple system, good portability, low cost, and 24/7 and all-weather work. It can be installed in large quantities and has good prospects for development.
Journal Article
Praseodymium-Doped Cr2O3 Prepared by In Situ Pyrolysis of MIL-101(Cr) for Highly Efficient Catalytic Oxidation of 1,2-Dichloroethane
by
Hu, Zhaoxia
,
Zhu, Pengfei
,
Chen, Shouwen
in
1,2-dichloroethane
,
Adsorption
,
Catalytic oxidation
2024
The development of economical catalysts that exhibit both high activity and durability for chlorinated volatile organic compounds (CVOCs) elimination remains a challenge. The oxidizing and acidic sites play a crucial role in the oxidation process of CVOCs; herein, praseodymium (Pr) was introduced into CrOx catalysts via in situ pyrolysis of MIL-101(Cr). With the decomposition of the ligand, a mixed micro-mesoporous structure was formed within the M-Cr catalyst, thereby reducing the contact resistance between catalyst active sites and the 1,2-dichloroethane molecule. Moreover, the synergistic interaction between chromium and praseodymium facilitates Oβ species and acidic sites, significantly enhancing the low-temperature catalytic performance and durability of the M-PrCr catalyst for 1,2-dichloroethane (1,2-DCE) oxidation. The M-30PrCr catalyst possess enhanced active oxygen sites and acid sites, thereby exhibiting the highest catalytic activity and stability. This study may provide a novel and promising strategy for practical applications in the elimination of 1,2-DCE.
Journal Article
Effects and action mechanisms of individual cytokines contained in PRP on osteoarthritis
2023
Osteoarthritis (OA) is defined as a degenerative joint disease that can affect all tissues of the joint, including the articular cartilage, subchondral bone, ligaments capsule, and synovial membrane. The conventional nonoperative treatments are ineffective for cartilage repair and induce only symptomatic relief. Platelet-rich plasma (PRP) is a platelet concentrate derived from autologous whole blood with a high concentration of platelets, which can exert anti-inflammatory and regenerative effects by releasing multiple growth factors and cytokines. Recent studies have shown that PRP exhibits clinical benefits in patients with OA. However, high operational and equipment requirements greatly limit the application of PRP to OA treatment. Past studies have indicated that high-concentration PRP growth factors and cytokines may be applied as a commercial replacement for PRP. We reviewed the relevant articles to summarize the feasibility and mechanisms of PRP-based growth factors in OA. The available evidence suggests that transforming growth factor-α and β, platelet-derived growth factors, epidermal growth factor, insulin-like growth factor-1, and connective tissue growth factors might benefit OA, while vascular endothelial growth factor, tumor necrosis factor-α, angiopoietin-1, and stromal cell derived factor-1α might induce negative effects on OA. The effects of fibroblast growth factor, hepatocyte growth factor, platelet factor 4, and keratinocyte growth factor on OA remain uncertain. Thus, it can be concluded that not all cytokines released by PRP are beneficial, although the therapeutic action of PRP has a valuable potential to improve.
Journal Article