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885 result(s) for "Zuo, Qin"
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Gut microbiota: an overlooked factor that plays a significant role in osteoporosis
Gut microbes are known as the body’s second gene pool. Symbiotic intestinal bacteria play a major role in maintaining balance in humans. Bad eating habits, antibiotic abuse, diseases, and a poor living environment have a negative effect on intestinal flora. Abnormal intestinal microbes are prone to cause a variety of diseases, affecting life expectancy and long-term quality of life, especially in older people. Several recent studies have found a close association between intestinal microorganisms and osteoporosis. The potential mechanism of intestinal flora affecting bone formation or destruction by mediating nitric oxide, the immune and endocrine systems, and other factors is briefly described in this review. All of these factors may be responsible for the intestinal flora that causes osteoporosis. Studying the relationship between intestinal flora and bone health not only provides new ideas for studying the role of intestinal microorganism in osteoporosis, but also provides a new therapeutic direction for clinically refractory osteoporosis. Study of the relationship between intestinal microbiota and osteoporosis is important for maintaining bone health and minimizing osteoporosis.
Comparative analysis of mitochondrial genomes in lycoperdaceae fungi reveals intron dynamics and phylogenetic relationships
Background The fungi of the Lycoperdaceae family are characterized by their nearly spherical fruiting bodies and possess pharmacological, economic, and ecological values. As a group of highly valuable fungi, the classification of species within the Lycoperdaceae family continues to be a subject of debate. Mitochondrial genomes typically harbor considerable number of genes and genetic elements that offer a wealth of genetic information, making them widely utilized in phylogenetic studies of eukaryotes. However, mitochondrial genome data for the Lycoperdaceae family is insufficient, and investigating its structure offers valuable insights into the evolutionary relationships between puffball fungi and other Agaricales taxa. Results In this study, we sequenced and compared the complete mitogenomes of four species of Lycoperdon and Calvatia for the first time. Comparative analysis indicated that introns and open reading frames (ORFs) influence mitochondrial genome size variation among the four species. The gene lengths and nucleotide compositions varied across the species, and synteny analysis suggested potential gene loss during Lycoperdaceae evolution. Phylogenetic relationships of 50 Agaricales and 16 Boletales species were reconstructed based on a concatenated mitochondrial gene dataset. The results elucidated the taxonomic placements of four Lycoperdaceae species within the Agaricales, confirming the monophyly of Lycoperdaceae and its nested position within Agaricaceae. With the expansion of the phylogenetic tree, the number of introns gradually decreased across the Boletales. Additionally, significant inversion and translocation events were observed in the tRNA genes of Lycoperdon pratense . Conclusion This study represents the first assembly of complete mitogenomes for four species within the Lycoperdaceae family, laying the foundation for subsequent phylogenetic research based on fungal mitochondrial gene dataset. Comparative analysis revealed the contribution of gene composition and introns to the mitochondrial genome size. Their mitochondrial genomes underwent frequent intron loss or gain events and potential intron transfer in evolution.
Bohr—Sommerfeld Levels for Quantum Completely Integrable Systems
In this paper we will show how the Bohr-Sommerfeld levels of a quantum completely integrable system can be computed modulo O ( ħ ∞ ) by an inductive procedure starting at stage zero with the Bohr-Sommerfeld levels of the corresponding classical completely integrable system.
The Physical Vapor Transport Method for Bulk AlN Crystal Growth
In this report, the development of physical vapor transport (PVT) methods for bulk aluminum nitride (AlN) crystal growth is reviewed. Three modified PVT methods with different features including selected growth at a conical zone, freestanding growth on a perforated sheet, and nucleation control with an inverse temperature gradient are discussed and compared in terms of the size and quality of the bulk AlN crystals they can produce as well as the process complexity. The PVT method with an inverse temperature gradient is able to significantly reduce the nucleation rate and realize the dominant growth of only one bulk AlN single crystal, and thus grow centimeter-sized bulk AlN single crystals. X-ray rocking curve (XRC) and Raman spectroscopy measurements showed a high crystalline quality of the prepared AlN crystals. The inverse temperature gradient provides an efficient and relatively low-cost method for the preparation of large-sized and high-quality AlN seed crystals used for seeded growth, devoted to the diameter enlargement and quality improvement of bulk AlN single crystals.
Flp, a Fis‐like protein, contributes to the regulation of type III secretion and virulence processes in the phytopathogen Xanthomonas campestris pv. campestris
Summary The ability of the plant pathogen Xanthomonas campestris pv. campestris (Xcc) to cause disease is dependent on its ability to adapt quickly to the host environment during infection. Like most bacterial pathogens, Xcc has evolved complex regulatory networks that ensure expression and regulation of their virulence genes. Here, we describe the identification and characterization of a Fis‐like protein (named Flp), which plays an important role in virulence and type III secretion system (T3SS) gene expression in Xcc. Deletion of flp caused reduced virulence and hypersensitive response (HR) induction of Xcc and alterations in stress tolerance. Global transcriptome analyses revealed the Flp had a broad regulatory role and that most T3SS HR and pathogenicity (hrp) genes were down‐regulated in the flp mutant. β‐glucuronidase activity assays implied that Flp regulates the expression of hrp genes via controlling the expression of hrpX. More assays confirmed that Flp binds to the promoter of hrpX and affected the transcription of hrpX directly. Interestingly, the constitutive expression of hrpX in the flp mutant restored the HR phenotype but not full virulence. Taken together, the findings describe the unrecognized regulatory role of Flp protein that controls hrp gene expression and pathogenesis in Xcc.
Effect of eating habits on obesity in adolescents: a study among Chinese college students
Objective Obesity has been linked to cardiovascular disease, diabetes, and osteoarthritis. Obesity and overweight pose a serious threat to human health, with an estimated 190 million overweight and obese people worldwide. Thus, we investigated the influence of certain eating habits on weight among Chinese college students. Methods We conducted a cross-sectional survey of 536 college students in Shijiazhuang, China. The survey included questions about eating habits. We analyzed the relationship between participants’ responses and obesity. Results Sex, residence, speed of eating, number of meals eaten per day, and a diet high in sugar were found to be correlated with obesity. Our results suggest that increasing the number of meals per day, slowing down the pace of eating, and reducing the intake of high-sugar foods have potential benefits for reducing obesity among college students. Conclusions In the present study, we found that some dietary habits are related to the occurrence of obesity among college-aged individuals.
CD73: Friend or Foe in Lung Injury
Ecto-5′-nucleotidase (CD73) plays a strategic role in calibrating the magnitude and chemical nature of purinergic signals that are delivered to immune cells. Its primary function is to convert extracellular ATP to adenosine in concert with ectonucleoside triphosphate diphosphohydrolase-1 (CD39) in normal tissues to limit an excessive immune response in many pathophysiological events, such as lung injury induced by a variety of contributing factors. Multiple lines of evidence suggest that the location of CD73, in proximity to adenosine receptor subtypes, indirectly determines its positive or negative effect in a variety of organs and tissues and that its action is affected by the transfer of nucleoside to subtype-specific adenosine receptors. Nonetheless, the bidirectional nature of CD73 as an emerging immune checkpoint in the pathogenesis of lung injury is still unknown. In this review, we explore the relationship between CD73 and the onset and progression of lung injury, highlighting the potential value of this molecule as a drug target for the treatment of pulmonary disease.
Non-linear relationship between basal serum albumin concentration and cardiac arrest in critically ill patients with end-stage renal disease: a cross-sectional study
ObjectivesThe aim of our study was to investigate the association between serum albumin concentration and the risk of cardiac arrest in critically ill patients with end-stage renal disease in the intensive care unit (ICU).DesignThis was a secondary analysis.SettingThe Phillip electronic-ICU collaborative database from 2014 to 2015.ParticipantsThis study included 4990 critically ill patients diagnosed with end-stage renal disease.Primary and secondary outcome measuresThe exposure of interest was serum albumin concentration. The outcome variable was cardiac arrest.ResultsA non-linear relationship was observed between serum albumin concentration and risk of cardiac arrest, with an inflection point of 3.26 g/dL after adjusting for potential confounders. The effect sizes and the CIs on the left and right sides of the inflection point were 0.88 (0.65 to 1.19) and 0.32 (0.16 to 0.64), respectively.ConclusionsWithin an albumin range of 3.26–5.6 g/dL, each 1 g/dL increase in serum levels is associated with a 68% decrease of the risk of cardiac arrest in critically ill patients with end-stage renal disease.
Association of the ADORA2A receptor and CD73 polymorphisms with epilepsy
Single-nucleotide polymorphisms are connected with the risk of epilepsy on occurrence, progress, and the individual response to drugs. Progress in genomic technology is exposing the complex genetic architecture of epilepsy. Compelling evidence has demonstrated that purines and adenosine are key mediators in the epileptic process. Our previous study found the interconnection of P2Y12 receptor single-nucleotide polymorphisms and epilepsy. However, little is known about the interaction between the purine nucleoside A 2A receptor and rate-limiting enzyme ecto-5′-nucleotidase/CD73 and epilepsy from the genetic polymorphism aspect. The aim of the study is to evaluate the impact of A 2A R and CD73 polymorphisms on epilepsy cases. The study group encompassed 181 patients with epilepsy and 55 healthy volunteers. A significant correlation was confirmed between CD73 rs4431401 and epilepsy ( p < 0.001), with TT genotype frequency being higher and C allele being lower among epilepsy patients in comparison with healthy individuals, indicating that the presence of the TT genotype is related to an increased risk of epilepsy (OR = 2.742, p = 0.006) while carriers of the C allele demonstrated a decreased risk of epilepsy (OR = 0.304, p < 0.001). According to analysis based on gender, the allele and genotype of rs4431401 in CD73 were associated with both male and female cases ( p < 0.0001, p = 0.026, respectively). Of note, we found that A2AR genetic variants rs2267076 T>C ( p = 0.031), rs2298383 C>T ( p = 0.045), rs4822492 T>G ( p = 0.034), and rs4822489 T>G ( p = 0.029) were only associated with epilepsy in female subjects instead of male. It is evident that the TT genotype and T allele of rs4431401 in CD73 were genetic risk factors for epilepsy, whereas rs2267076, rs2298383, rs4822492, and rs4822489 polymorphisms of the A 2A R were mainly associated with female subjects.
Chromosome-level genome assembly of Niphotrichum japonicum provides new insights into heat stress responses in mosses
With a diversity of approximately 22,000 species, bryophytes (hornworts, liverworts, and mosses) represent a major and diverse lineage of land plants. Bryophytes can thrive in many extreme environments as they can endure the stresses of drought, heat, and cold. The moss Niphotrichum japonicum (Grimmiaceae, Grimmiales) can subsist for extended periods under heat and drought conditions, providing a good candidate for studying the genetic basis underlying such high resilience. Here, we de novo assembled the genome of N. japonicum using Nanopore long reads combined with Hi-C scaffolding technology to anchor the 191.61 Mb assembly into 14 pseudochromosomes. The genome structure of N. japonicum ’s autosomes is mostly conserved and highly syntenic, in contrast to the sparse and disordered genes present in its sex chromosome. Comparative genomic analysis revealed the presence of 10,019 genes exclusively in N. japonicum . These genes may contribute to the species-specific resilience, as demonstrated by the gene ontology (GO) enrichment. Transcriptome analysis showed that 37.44% (including 3,107 unique genes) of the total annotated genes (26,898) exhibited differential expression as a result of heat-induced stress, and the mechanisms that respond to heat stress are generally conserved across plants. These include the upregulation of HSP s, LEA s, and reactive oxygen species (ROS) scavenging genes, and the downregulation of PPR genes. N. japonicum also appears to have distinctive thermal mechanisms, including species-specific expansion and upregulation of the Self-incomp_S1 gene family, functional divergence of duplicated genes, structural clusters of upregulated genes, and expression piggybacking of hub genes. Overall, our study highlights both shared and species-specific heat tolerance strategies in N. japonicum , providing valuable insights into the heat tolerance mechanism and the evolution of resilient plants.