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Recently, the family Midichloriaceae has been described within the bacterial order Rickettsiales. It includes a variety of bacterial endosymbionts detected in different metazoan host species belonging to Placozoa, Cnidaria, Arthropoda and Vertebrata. Representatives of Midichloriaceae are also considered possible etiological agents of certain animal diseases. Midichloriaceae have been found also in protists like ciliates and amoebae. The present work describes a new bacterial endosymbiont, \"Candidatus Fokinia solitaria\", retrieved from three different strains of a novel Paramecium species isolated from a wastewater treatment plant in Rio de Janeiro (Brazil). Symbionts were characterized through the full-cycle rRNA approach: SSU rRNA gene sequencing and fluorescence in situ hybridization (FISH) with three species-specific oligonucleotide probes. In electron micrographs, the tiny rod-shaped endosymbionts (1.2 x 0.25-0.35 μm in size) were not surrounded by a symbiontophorous vacuole and were located in the peripheral host cytoplasm, stratified in the host cortex in between the trichocysts or just below them. Frequently, they occurred inside autolysosomes. Phylogenetic analyses of Midichloriaceae apparently show different evolutionary pathways within the family. Some genera, such as \"Ca. Midichloria\" and \"Ca. Lariskella\", have been retrieved frequently and independently in different hosts and environmental surveys. On the contrary, others, such as Lyticum, \"Ca. Anadelfobacter\", \"Ca. Defluviella\" and the presently described \"Ca. Fokinia solitaria\", have been found only occasionally and associated to specific host species. These last are the only representatives in their own branches thus far. Present data do not allow to infer whether these genera, which we named \"stand-alone lineages\", are an indication of poorly sampled organisms, thus underrepresented in GenBank, or represent fast evolving, highly adapted evolutionary lineages.

Species of Spirostomum Ehrenberg, 1838 are widely used as model organisms in ecological studies of environmental impacts and symbioses between ciliates and human pathogenic bacteria. However, the taxonomy of this genus is confused by the superficiality of the morphological descriptions of its included species, and the use of only a few characters for their differentiation. The present study provides details of total infraciliature, nuclear apparatus, morphometric data and 18S rDNA gene sequences of Spirostomum teres Claparède & Lachmann, 1858 and Spirostomum minus Roux, 1901, isolated from a sewage treatment plant and a freshwater lake in the city of Rio de Janeiro, Brazil, respectively. For the morphological descriptions of S. teres and S. minus, living cells were observed using bright-field and differential interference contrast (DIC) microscopy, the total infraciliature and nuclear apparatus were revealed by staining with protargol, and ciliary patterns were observed also with scanning electron microscopy (SEM). The complete sequences of the 18S rDNA of S. teres and S. minus were obtained using eukaryotic universal primers, and then compared with sequences of other species and populations of Spirostomum deposited in the GenBank database. Living S. minus measured 400-800 µm in length and 55-115 µm in width, with the following characteristics: adoral zone of membranelles approximately 112 µm long; inconspicuous paroral kinety; 30-40 kineties in somatic ciliature; moniliform macronucleus with 9-25 nodes, approximately 12 micronuclei; single and posterior contractile vacuole; and yellow-brown cytoplasm. Living and fully extended S. teres measured approximately 250 µm in length and 65 ìm in width, with the following characteristics: adoral zone of membranelles approximately 92 µm long; approximately 30 somatic kineties; compact macronucleus, approximately five micronuclei; macronuclear groove present; single and posterior contractile vacuole; and colorless cytoplasm. Evidence from 18S rDNA sequences confirms the identification of S. teres and suggests the existence of cryptic species closely related to S. minus. The use of silver impregnation technique (protargol) allowed the observation and description of a greater number of characters in S. minus and S. teres, thus assisting the research that require identification of these species. [PUBLICATION ABSTRACT]

The aim of this study was to evaluate the Zn sensitivity of Euplotes vannus, Euplotes crassus, and their naturally associated bacteria sampled from sediments in the northwest and east regions of Guanabara Bay. The unexposed ciliates and bacteria did not appear to be negatively affected by 96 h of assay. In the control group, E. vannus exhibited an increase in the biomass content from 2.3 × 10²to 2.3 × 10³ μg C cm⁻³between 0 and 96 h, and E. crassus increased up to 7.07 × 10² μg C cm⁻³at 48 h. The maximum biomass was pointed by E. crassus (1.33 × 10³ μg C cm⁻³) in the presence of 0.005 mg Zn L⁻¹and E. vannus was naturally associated bacteria (2.40 × 10⁻¹ μg C cm⁻³) in the presence of 1.0 mg Zn L⁻¹(96 h). The growth of E. vannus from the northwest region showed concentration-dependent manners, and it is more sensitive to zinc than E. crassus from the southeast. Naturally associated bacteria showed better adaptation to increasing concentrations of Zn, and the Dunnett test showed that previous environmental selection is important. These results show that new bioremediation tools are necessary.

During an ecological study of the epibiotic relationship between ciliate protists and Pomacea figulina (Spix, 1827) (Gastropoda, Ampullariidae), originating from an urban stream in southeast Brazil, a high infestation by the peritrich ciliate Carchesium polypinum (Linnaeus, 1758) Ehrenberg, 1830 (Ciliophora, Peritrichia) associated to the shell of one mollusc among 23 was observed. We provided a morphological and morphometric study of C. polypinum using observations of specimens in vivo, after protargol staining, and examined using scanning electron microscopy. The Brazilian-population of C. polypinum is characterized by: size of zooid in vivo 89 µm x 57 µm on average; colony regularly dichotomously branched with usually up to 40 zooids; macronucleus usually J-shaped; single contractile vacuole located in the upper third of body; myoneme not continuous throughout the colony; stalks contract despite the discontinuity of their individual myonemes; polykinety comprises three peniculi, each consisting of three kineties. The high infestation showed here could be related to the preference for eutrophic environments showed by C. polypinum and suggested that ciliate epibionts may be ecologically important in aquatic habitats.

In samples of raw sewage collected from a sewage treatment plant in Rio de Janeiro (ETE-Penha), we found populations of two species, Deviata estevesi Paiva & Silva-Neto, 2005 and Deviata brasiliensis sp. nov. The organisms were studied in vivo under phase contrast microscopy, differential interference contrast (DIC), and after protargol-impregnation. The population of D. estevesi exhibited more extensive variation in cirral pattern than previously described. The interphasic organisms of new species D. brasiliensis sp. nov. are distinguishable from their congeners based on a series of morphometric features: cirral row R3 usually presents 1-3 cirri behind the right frontal cirrus, on average there are four macronuclear nodules, and, during morphogenesis of cell division, primordium V of the proter originates from the anterior region of cirral row R5 instead of row R6, as in the type species D. abbrevescens Eigner, 1995. In D. estevesi, the ventral cirral rows replicate by within-row primordia, which develop independently for the proter and for the opisthe, suggesting that it belongs to or is closely related to Parastrongylidium, hence the combination P. estevesi comb. nov. is established.

A quick diagnosis of the ecological quality of five sections of the Macacu-Guapiaçu hydrographic complex was performed using visual assessment protocol (VAP), conventional analysis, composition and structure of ciliates and the occurrence of benthic macro invertebrates. Water samples were collected from five sampling stations (A-E) in July of 2010. Protists were sampled with aid of artificial substrates, and macro invertebrates were sampled using the multi-habitat method. A total of 22 taxa of protozoa and 51 taxa of macro invertebrates was registered at the five stations. Reference station (A) showed greater protist diversity and higher values of BMWP-CETEC and IBE-IOC indices relating to macro invertebrates. The impacted stations (B and E) presented lower diversity and higher abundance of protozoa, as well as the lowest values for the rates. The four methods used were convergent to diagnose reference station (A), the impacted stations (B and E) and those in intermediate conditions (C and D). Thus, the methods were complementary, as the conventional parameters and ciliate assembly were more sensitive to detecting the increase in organic pollution and VAP and macro invertebrate assembly detected changes in geomorphology and habitat degradation.