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The Chemical Biology of Nitrogen book provides a chemocentric approach to both the inorganic and organic chemical biology of nitrogen. Following an introduction to nitrogen trivalency the book progresses through the logic of inorganic nitrogen metabolism and organic nitrogen metabolites to nitrogen proteomics.

Frink et al examine the changing ratio of fertilizer nitrogen application to its intended incorporation in crop yield and discuss prospects for more or less nitrogen fertilizer by 2070.

Plankton are a major component of food web structure in aquatic ecosystems. Their distribution and community structure are driven by the combination and interactions between physical, chemical, and biological factors within the environment. In the present study, water quality and the community structure of phytoplankton and zooplankton were monthly investigated from January to December 2015 at 11 sampling sites along the gradient course of the Day River (Red River Delta, northern Vietnam). The study demonstrated that the Day River was eutrophic with the average values of total phosphorus concentration 0.17 mg/L, total nitrogen concentration 1.98 mg/L, and Chl a 54 mu g/L. Microscopic plankton analysis showed that phytoplankton comprised 87 species belonging to seven groups in which Chlorophyceae, Bacillariophyceae, and Cyanobacteria accounted for the most important constituents of the river's phytoplankton assemblage. A total 53 zooplankton species belonging to three main groups including Copepoda, Cladocera, and Rotatoria were identified. Plankton biomass values were greatest in rainy season (3002.10-3 cell/L for phytoplankton and 12.573 individuals/m(3) for zooplankton). Using principal correspondence and Pearson correlation analyses, it was found that the Day River was divided into three main site groups based on water quality and characteristics of plankton community. Temperature and nutrients (total phosphorus and total nitrogen) are key factors regulating plankton abundance and distribution in the Day River.

Soil is a key compartment for climate regulation as a source of greenhouse gases (GHGs) emissions and as a sink of carbon. Thus, soil carbon sequestration strategies should be considered alongside reduction strategies for other greenhouse gas emissions. Taking this into account, several international and European policies on climate change are now acknowledging the importance of soils, which means that proper, comparable and reliable information is needed to report on carbon stocks and GHGs emissions from soil. It also implies a need for consensus on the adoption and verification of mitigation options that soil can provide. Where consensus is a key aspect, formal standards and guidelines come into play. This paper describes the existing ISO soil quality standards that can be used in this context, and calls for new ones to be developed through (international) collaboration. Available standards cover the relevant basic soil parameters including carbon and nitrogen content but do not yet consider the dynamics of those elements. Such methods have to be developed together with guidelines consistent with the scale to be investigated and the specific use of the collected data. We argue that this standardization strategy will improve the reliability of the reporting procedures and results of the different climate models that rely on soil quality data.

Although widely studied in grassland and forest ecosystems, dissolved organic nitrogen (DON), an important form of nitrogen (N) lost through leaching, has received little attention in cropland ecosystem research. A global literature review and partial least squares path modeling (PLS–PM) were adopted to assess the quantity and composition of N leaching loss under different cropping systems, soil types, and management practices, as well as to identify the major factors controlling DON leaching. Annual total dissolved nitrogen (TDN, organic + inorganic N) leaching under different cropping systems ranged from 4.0 to 383.2 kg N ha−1. Vegetable and rice production systems showed the greatest and least TDN leaching, respectively. Across different cropping systems, DON accounted for 4.7%–34.9% of TDN in leachate. The NH4+–N form of N leaching is negligible in most upland cropping systems (<2.3%), but not so in lowland rice systems. The largest ratio of DON leaching to TDN leaching was found in a rice–wheat rotation (34.9%). Catch crop slightly increased DON leaching; however, it greatly decreased TDN leaching. Cropping systems in which animal manure or plant compost was applied or lowland rice was included showed a relatively high DON leaching ratio. Accordingly, in investigating DON leaching, more attention should be focused on cropping systems with manure application or lowland rice systems. Compared with climatic conditions and soil properties, field management practices (irrigation, chemical N input, and manure amendments) proved to be the factors most strongly influencing DON leaching. This suggests that optimizing water and N management practices is the most effective way of reducing the risk of DON leaching and increasing N use efficiency, particularly for vegetable and rice production systems.

Physiological responses of plants to elevated carbon dioxide (CO2) and nitrogen (N) availability are ecologically important because of increased atmospheric CO2 concentrations and N enrichment in many ecosystems. Here, the effects of N availability on the responses of six wetland plant species to elevated CO2 levels are examined in terms of growth and root exudation. Six species of emergent plant species typically found in marshes were incubated under two levels of CO2 (370 and 740 ppm) and two levels of N (0 and 8.8 mg N L–1). Elevated CO2 did not affect shoot biomass, root biomass, and height significantly, regardless of N levels. The C/N ratio of plant species increased in response to elevated CO2 levels, but this effect varied by species. All species released higher amounts of dissolved organic carbon under elevated CO2 compared with ambient air conditions. This response was limited under low soil N concentrations. By contrast, phenolic content increased significantly with elevated CO2 under low-N treatment. The findings suggest that elevated CO2 is not responsible for biomass accumulation of emergent wetland plant species, but does elicit changes in the quantity and quality of root exudates, which are, in turn, dependent on N availability to plant species.

Agriculture and urban activities are major sources of phosphorus and nitrogen to aquatic ecosystems. Atmospheric deposition further contributes as a source of N. These nonpoint inputs of nutrients are difficult to measure and regulate because they derive from activities dispersed over wide areas of land and are variable in time due to effects of weather. In aquatic ecosystems, these nutrients cause diverse problems such as toxic algal blooms, loss of oxygen, fish kills, loss of biodiversity (including species important for commerce and recreation), loss of aquatic plant beds and coral reefs, and other problems. Nutrient enrichment seriously degrades aquatic ecosystems and impairs the use of water for drinking, industry, agriculture, recreation, and other purposes. Based on our review of the scientific literature, we are certain that (1) eutrophication is a widespread problem in rivers, lakes, estuaries, and coastal oceans, caused by over-enrichment with P and N; (2) nonpoint pollution, a major source of P and N to surface waters of the United States, results primarily from agriculture and urban activity, including industry; (3) inputs of P and N to agriculture in the form of fertilizers exceed outputs in produce in the United States and many other nations; (4) nutrient flows to aquatic ecosystems are directly related to animal stocking densities, and under high livestock densities, manure production exceeds the needs of crops to which the manure is applied; (5) excess fertilization and manure production cause a P surplus to accumulate in soil, some of which is transported to aquatic ecosystems; and (6) excess fertilization and manure production on agricultural lands create surplus N, which is mobile in many soils and often leaches to downstream aquatic ecosystems, and which can also volatilize to the atmosphere, redepositing elsewhere and eventually reaching aquatic ecosystems. If current practices continue, nonpoint pollution of surface waters is virtually certain to increase in the future. Such an outcome is not inevitable, however, because a number of technologies, land use practices, and conservation measures are capable of decreasing the flow of nonpoint P and N into surface waters. From our review of the available scientific information, we are confident that: (1) nonpoint pollution of surface waters with P and N could be reduced by reducing surplus nutrient flows in agricultural systems and processes, reducing agricultural and urban runoff by diverse methods, and reducing N emissions from fossil fuel burning; and (2) eutrophication can be reversed by decreasing input rates of P and N to aquatic ecosystems, but rates of recovery are highly variable among water bodies. Often, the eutrophic state is persistent, and recovery is slow.

The feeding ecology of leptocephali has remained poorly understood because they apparently feed on particulate organic matter (POM), which varies in composition, and it is unclear which components of the POM they assimilate. The δ13C and δ15N stable isotope (SI) and fatty acid (FA) compositions of 3 families of leptocephali and POM were compared in 3 latitudinal current zones of the western South Pacific. The δ15N signatures of leptocephali and POM overlapped, with both having their lowest values in the southern current zone. POM in general (across all zones) contained 38 FAs and was rich in saturated FAs (SFA) (16:0, 18:0, 14:0), while leptocephali contained 50 FAs, with high proportions of 16:0, and higher contributions of 22:6ω3, 20:5ω3, 18:1ω9, 16:1ω7 and other FAs than found in the POM. Serrivomeridae leptocephali in the north had higher δ15N signatures and were also distinguished from Nemichthyidae and Muraenidae larvae by their FA compositions (higher SFAs, lower 22:6ω3 and 20:5ω3). Although SI signatures of the Serrivomeridae larvae did not clearly vary with size, 16:0 and 18:0 FA proportions decreased with increasing larval size, and 22:6ω3 and 16:1ω7 increased in larger larvae. Correspondences between the latitudinal variations in nitrogen SI signatures and FA compositions of POM with those of leptocephali and the presence of FA markers of both autotrophic and heterotrophic organisms were consistent with leptocephali feeding on POM. POM can contain various materials from primary producers and heterotrophic microorganisms, but differences in the SI signatures and FA compositions in leptocephali remain to be explained through further research.

In a 12-year experimental study of nitrogen (N) deposition on Minnesota grasslands, plots dominated by native warm-season grasses shifted to low-diversity mixtures dominated by cool-season grasses at all but the lowest N addition rates. This shift was associated with decreased biomass carbon (C):N ratios, increased N mineralization, increased soil nitrate, high N losses, and low C storage. In addition, plots originally dominated by nonnative cool-season grasses retained little added N and stored little C, even at low N input rates. Thus, grasslands with high N retention and C storage rates were the most vulnerable to species losses and major shifts in C and N cycling.