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Description of the complete rDNA repeat unit structure of Coturnixjaponica Temminck et Schlegel, 1849 (Aves)
2024
Ribosomal RNA (18S, 5.8S, 28S) gene clusters in genomes form regions that consist of multiple tandem repeats. They are located on a single or several pairs of chromosomes and play an important role in the formation of the nucleolus responsible for the assembly of ribosome subunits. The rRNA gene cluster sequences are widely used for taxonomic studies, however at present, complete information on the avian rDNA repeat unit structure including intergenic spacer sequence is available only for the chicken (
Linnaeus, 1758). The GC enrichment and high-order repeats peculiarities within the intergenic spacer described for the chicken rDNA cluster may be responsible for these failures. The karyotype of the Japanese quail (
Temminck et Schlegel, 1849) deserves close attention because, unlike most birds, it has three pairs of nucleolar organizer bearing chromosomes, two of which are microchromosomes enriched in repeating elements and heterochromatin that carry translocated terminal nucleolar organizers. Here we assembled and annotated the complete Japanese quail ribosomal gene cluster sequence of 21166 base pairs (GenBank under the registration tag BankIt2509210 CoturnixOK523374). This is the second deciphered avian rDNA cluster after the chicken. Despite the revealed high similarity with the chicken corresponding sequence, it has a number of specific features, which include a slightly lower degree of GC content and the presence of bendable elements in the content of both the transcribed spacer I and the non-transcribed intergenic spacer.
Journal Article
A comparative cytogenetic study of Hypsibarbusmalcolmi and H.wetmorei (Cyprinidae, Poropuntiini)
by
Jantarat, Sitthisak
,
Khensuwan, Sudarat
,
Suwannapoom, Chatmongkon
in
Animalia
,
Asia
,
Genetics
2023
Cyprininae are a highly diversified but demonstrably monophyletic lineage of cypriniform fishes. Here, the karyotype and chromosomal characteristics of Hypsibarbusmalcolmi (Smith, 1945) and H.wetmorei (Smith, 1931) were examined using conventional, nucleolus organizing regions (NORs) and molecular cytogenetic protocols. The diploid chromosome number (2n) of H.malcolmi was 50, the fundamental number (FN) was equal to 62, and the karyotype displayed 8m + 4sm + 38a with NORs located at the centromeric and telomeric positions of the short arms of chromosome pairs 1 and 2, respectively. 2n of H.wetmorei was 50, FN 78, karyotype 14m + 14sm + 22a with the NORs at the telomeric position of the short arm of chromosome pair 2. 2n and FN in males and females were identical. Fluorescence in situ hybridization using different microsatellite motifs as probes also showed substantial genomic divergence between both studied species. In H.wetmorei, (CAG)n and (CAC)n microsatellites accumulated in the telomeric regions of all chromosomes, while in H.malcolmi, they had scattered signals on all chromosomes. Besides, the (GAA)n microsatellites were distributed along all chromosomes of H.malcolmi, but there was a strong hybridization pattern in the centromeric region of a single pair in H.wetmorei. These cytogenomic difference across the genomes of these Hypsibarbus Rainboth, 1996 species are markers for specific evolutionary differentiation within these two species.Cyprininae are a highly diversified but demonstrably monophyletic lineage of cypriniform fishes. Here, the karyotype and chromosomal characteristics of Hypsibarbusmalcolmi (Smith, 1945) and H.wetmorei (Smith, 1931) were examined using conventional, nucleolus organizing regions (NORs) and molecular cytogenetic protocols. The diploid chromosome number (2n) of H.malcolmi was 50, the fundamental number (FN) was equal to 62, and the karyotype displayed 8m + 4sm + 38a with NORs located at the centromeric and telomeric positions of the short arms of chromosome pairs 1 and 2, respectively. 2n of H.wetmorei was 50, FN 78, karyotype 14m + 14sm + 22a with the NORs at the telomeric position of the short arm of chromosome pair 2. 2n and FN in males and females were identical. Fluorescence in situ hybridization using different microsatellite motifs as probes also showed substantial genomic divergence between both studied species. In H.wetmorei, (CAG)n and (CAC)n microsatellites accumulated in the telomeric regions of all chromosomes, while in H.malcolmi, they had scattered signals on all chromosomes. Besides, the (GAA)n microsatellites were distributed along all chromosomes of H.malcolmi, but there was a strong hybridization pattern in the centromeric region of a single pair in H.wetmorei. These cytogenomic difference across the genomes of these Hypsibarbus Rainboth, 1996 species are markers for specific evolutionary differentiation within these two species.
Journal Article
Triploid female Helophorusbrevipalpis Bedel, 1881 in Provence, France, with additional data on C-banding in both triploid and diploid material, and discussion of chromosomal variation in H.brevipalpis
2025
Triploid female
Bedel, 1881 are recorded from two localities in Provence, France. Their karyotypes are analysed using both chromosome morphology and C-banding. Their karyotypes appear to be identical with those of Spanish material recorded by Angus (1992) but show minor differences from Italian triploid material described by Angus, Jia (2020). Data on C-banding in English
are given and chromosomal variation in
is discussed.
Journal Article
Karyotype of Hynobiusfucus Lai et Lue, 2008, a salamander endemic to Taiwan with comments in memory of June-Shian Lai, a pioneer in studies of mountainous salamanders (Urodela, Hynobiidae)
2025
The chromosome number of
was found by Lai and Lue (2008) to be 2n = 58, displaying a karyomorph similar to those previously reported in stream-type salamanders from Taiwan. Based not only on cytogenetic features but also on developmental characteristics such as the embryonic stage and the presence of interdigital membranes during limb formation this species can be confidently classified as a lotic stream-type salamander. Morescalchi (1975) proposed that karyotype evolution in families of urodeles tends to proceed from higher to lower chromosome numbers. Our findings from Taiwan suggest karyotype evolution within the genus
, that is, the chromosome number of this species may have increased from 2n = 56 in the pond-type ancestor to 2n = 58 in this stream-type lineage.
Journal Article
Dynamic meiotic behavior and evolutionary insights of supernumerary B chromosomes in the hangingfly Bittacuscirratus (Mecoptera, Bittacidae)
2025
Supernumerary B chromosomes are significant dispensable genetic elements that follow their own species-specific evolutionary pathways. Despite their widespread occurrence, comprehensive analyses of their meiotic behavior remain limited. In this study, we present the first systematic investigation of B chromosome morphology and meiotic behavior in the hangingfly
Tjeder, 1956 using cytogenetic approaches. The male basal chromosome numbers of
is 2n = 30 + XO, with 0-5 polymorphic B chromosomes. Intraspecific B chromosome polymorphism manifests as various distinct morphotypes ranging from punctiform, bicentric, and ring-shaped to larger coiled forms, indicating that the B chromosomes may undergo rapid structural changes. During meiosis, B chromosomes display transmission drive through asymmetric segregation, preferentially accumulating in one daughter cell. Most B chromosomes formed univalents, with few forming bivalents or trivalents at meiosis I. Three unconventional retention mechanisms were identified in univalent B chromosomes: (1) associating with a nonhomologous chromosome, (2) accumulating near spindle poles, and (3) contributing to unequal spindle formation. Based on the abundant chromosomal changes of A chromosomes and stable XX/XO sex determination, we infer that the B chromosomes likely originated from multiple A chromosomes in
. The roles of B chromosomes in the cell cycle and individual fitness are briefly discussed, and the evolutionary scenario is putatively put forward for the diversification of B chromosomes.
Journal Article
Triploidy in parthenogenetic Chinese Helophorus aquila
2025
Checking old unphotographed slides of chromosome preparations in the possession of R.B.A. revealed one slide labelled \"
♀7g 6/6/13 ✓\". The beetle with these data is a female paratype of
Angus et al., in the general collection of the Natural History Museum, London. One almost complete dividing nucleus was found, with 32 chromosomes, indicating a triploid nucleus with one chromosome lost in the course of preparation of the slide.
Journal Article
The new highest number of B chromosomes (Bs) in Leisler's bat Nyctalusleisleri (Kuhl, 1817)
2022
B chromosomes (Bs) are supernumerary to the standard chromosome set, from which they prevalently derive. Variation in numbers both among individuals or populations and among cells within individuals is their constant feature. Leisler's bat
(Kuhl, 1817) is one of only four species of Chiroptera with detected Bs. Four males of
were collected from two localities on the territory of Serbia and cytogenetically analysed. All animals had Bs with interindividual variability ranging from two to five heterochromatic micro Bs. The highest number of Bs was detected in this species. Among mammals, Rodentia and Chiroptera are orders with the largest number of species, but Bs frequently appear in rodents and rarely in chiropterans. Possible explanations for this difference are offered.
Journal Article
New record of Miniopterusmagnater (Chiroptera, Miniopteridae) from south-western China and a comparative study of three species of Miniopterus in China
2024
This research documents a new record of
in the south-western region of China, a significant discovery given the limited diversity of the
genus within the country. Only three species of
occur in China:
,
and
. These species share a high degree of morphological similarity, particularly in their external characteristics. This underscores the necessity for the identification of additional distinguishing traits that can aid in the taxonomic differentiation of these closely-related species.
During the 2023 field expedition to various nature reserves in Yunnan Province, China, we encountered specimens of the genus
. Utilising a combination of morphological assessments and phylogenetic analyses, we identified six individuals as
. A review of the existing geographical distribution data revealed that this species is primarily found in central and southern regions of China, with no previous records from the south-western part of the country. Based on our findings, we present a novel record of
's distribution in the south-western region of China.
Journal Article
Molecular cytogenetic study on the scleractinian coral Micromussaamakusensis (Veron, 1990) (Hexacorallia, Anthozoa, Cnidaria): isolation of five fluorescence in situ hybridization markers
by
Tominaga, Akira
,
Namura, Yuji
,
Baldove, Analyn B
in
Animalia
,
Comparative cytogenetics
,
Invertebrata
2025
Scleractinian (stony) corals are foundational to reef ecosystems, yet their taxonomy remains unresolved due to morphological plasticity and limited cytogenetic data. This study presents the first molecular cytogenetic characterization of the scleractinian coral
(Veron, 1990), employing fluorescence in situ hybridization (FISH) to isolate and map five DNA markers. Using the conventional Giemsa staining technique,
was found to have a diploid karyotype of 2n = 28, with a prominent homogeneously staining region (HSR) on the long arm of chromosome 12. Subsequently, five FISH markers designated as MA-H3 for
, MA-5S for
, MA-18/28S for
, MA-13C for centromeric region, and MA-TEL for telomeric region were cloned, sequenced, and mapped using FISH. FISH analysis revealed that the MA-H3 localized to the centromeric region of chromosome 1, MA-5S to the telomeric region of chromosome 4, MA-18/28S to the terminal region of chromosome 12 (coinciding with the HSR), MA-13C to the centromere of chromosome 13, and MA-TEL to multiple telomeric regions across several chromosomes. Sequence analysis confirmed marker identities and revealed conserved and novel repetitive elements. Furthermore, Genomic DNA hybridization (GDH) of whole-sperm DNA revealed signals collected at several telomeric regions, suggesting the presence of repetitive sequences. These cytogenetic markers enable the identification of at least 3 out of 14 chromosome pairs, allow for more precise karyotyping, and highlight chromosomal features that may help resolve coral classification and improve understanding of genome evolution. This research demonstrates the utility of molecular cytogenetics in stony coral systematics and provides new FISH markers for future comparative genomic studies.
Journal Article
A new species of Lepidepecreum Spence Bate & Westwood, 1868 (Crustacea, Amphipoda, Tryphosidae) from the Clarion-Clipperton Zone in the abyssal east Pacific
2026
The Tryphosidae is a species-rich family of the order Amphipoda. During the survey of the abyssal depths of the Clarion-Clipperton Zone in the east Pacific, a new species of the genus Lepidepecreum was found. The species is here illustrated and described in detail; a confocal laser scanning microscope image and a molecular barcode are also provided. Lepidepecreum myla sp. nov . differs from its congeners by the presence of a dorsal carina on all pereonites, moderately cleft telson (1/3 of the length), and a weak distal expansion of P7 basis, not extending longer than mid-merus. This study provides the first record of the genus from abyssal depths.
Journal Article