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The grey wolf ( Canis lupus ) was the first species to give rise to a domestic population, and they remained widespread throughout the last Ice Age when many other large mammal species went extinct. Little is known, however, about the history and possible extinction of past wolf populations or when and where the wolf progenitors of the present-day dog lineage ( Canis familiaris ) lived 1 – 8 . Here we analysed 72 ancient wolf genomes spanning the last 100,000 years from Europe, Siberia and North America. We found that wolf populations were highly connected throughout the Late Pleistocene, with levels of differentiation an order of magnitude lower than they are today. This population connectivity allowed us to detect natural selection across the time series, including rapid fixation of mutations in the gene IFT88 40,000–30,000 years ago. We show that dogs are overall more closely related to ancient wolves from eastern Eurasia than to those from western Eurasia, suggesting a domestication process in the east. However, we also found that dogs in the Near East and Africa derive up to half of their ancestry from a distinct population related to modern southwest Eurasian wolves, reflecting either an independent domestication process or admixture from local wolves. None of the analysed ancient wolf genomes is a direct match for either of these dog ancestries, meaning that the exact progenitor populations remain to be located. DNA from ancient wolves spanning 100,000 years sheds light on wolves’ evolutionary history and the genomic origin of dogs.

Background An increasing number of studies are addressing the evolutionary genomics of dog domestication, principally through resequencing dog, wolf and related canid genomes. There is, however, only one de novo assembled canid genome currently available against which to map such data - that of a boxer dog ( Canis lupus familiaris ). We generated the first de novo wolf genome ( Canis lupus lupus ) as an additional choice of reference, and explored what implications may arise when previously published dog and wolf resequencing data are remapped to this reference. Results Reassuringly, we find that regardless of the reference genome choice, most evolutionary genomic analyses yield qualitatively similar results, including those exploring the structure between the wolves and dogs using admixture and principal component analysis. However, we do observe differences in the genomic coverage of re-mapped samples, the number of variants discovered, and heterozygosity estimates of the samples. Conclusion In conclusion, the choice of reference is dictated by the aims of the study being undertaken; if the study focuses on the differences between the different dog breeds or the fine structure among dogs, then using the boxer reference genome is appropriate, but if the aim of the study is to look at the variation within wolves and their relationships to dogs, then there are clear benefits to using the de novo assembled wolf reference genome.

Assessing genetic diversity, population connectivity, demographic patterns, and phylogeographic relationships is vital for understanding the evolutionary history of species and thus aid in conservation management decisions. Indian wolves (currently, Canis lupus pallipes and Canis lupus chanco) are considered ancient, unique and divergent lineages among grey wolves, yet their population genetics are poorly understood. To void this knowledge gap, we collected samples from Indian peninsular (n = 77) and Himalayan wolves (n = 24) and used a combination of maternal (mtDNA CR and Cyt b) and bi-parental (nuclear microsatellites) markers to estimate levels of genetic diversity, examine the patterns of genetic structuring between them and within their distribution range, and assess their demographic histories. Both the wolf populations showed moderate levels of genetic variability, comparable to other grey wolves. Low levels of genetic differentiation were observed within both the Indian peninsular and Himalayan wolves indicating high levels of gene flow within their populations. On the other hand, high levels of genetic differentiation were observed between the two wolves indicating absence of gene flow. Molecular analysis highlighted the uniqueness of both the Indian wolves which was further supported by the presence of unique haplotypes indicating no admixture between them. Demographic analysis using both mtDNA and microsatellites revealed decline in population sizes of both the wolf lineages and both have undergone bottlenecks. Estimates of past effective population size revealed recent population declines of both lineages of Indian wolves at around 25–50 generations corresponding to about 100–200 years ago. Our results further support the designation of both lineages of Indian wolves as two distinct species Canis pallipes and Canis himalayensis and suggest increasing conservation efforts to save the unique and ancient wolf species from extinction.

The Egyptian jackal (Canis aureus lupaster) has hitherto been considered a large, rare subspecies of the golden jackal (C. aureus). It has maintained its taxonomical status to date, despite studies demonstrating morphological similarities to the grey wolf (C. lupus). We have analyzed 2055 bp of mitochondrial DNA from C. a. lupaster and investigated the similarity to C. aureus and C. lupus. Through phylogenetic comparison with all wild wolf-like canids (based on 726 bp of the Cytochrome b gene) we conclusively (100% bootstrap support) place the Egyptian jackal within the grey wolf species complex, together with the Holarctic wolf, the Indian wolf and the Himalayan wolf. Like the two latter taxa, C. a. lupaster seems to represent an ancient wolf lineage which most likely colonized Africa prior to the northern hemisphere radiation. We thus refer to C. a. lupaster as the African wolf. Furthermore, we have detected C. a. lupaster individuals at two localities in the Ethiopian highlands, extending the distribution by at least 2,500 km southeast. The only grey wolf species to inhabit the African continent is a cryptic species for which the conservation status urgently needs assessment.

Previous research on humans and animals suggests that the analysis of sleep patterns may reliably inform us about welfare status, but little research of this kind has been carried out for non-human animals in an applied context. This study explored the use of sleep and resting behaviour as indicators of welfare by describing the activity patterns of dogs (Canis lupus familiaris) housed in rescue shelters, and comparing their sleep patterns to other behavioural and cognitive measures of welfare. Sleep and activity patterns were observed over five non-consecutive days in a population of 15 dogs. Subsequently, the characteristics of sleep and resting behaviour were described and the impact of activity on patterns of sleep and resting behaviour analysed. Shelter dogs slept for 2.8% of the day, 14.3% less than previously reported and experienced less sleep fragmentation at night (32 sleep bouts). There were no statistically significant relationships between behaviours exhibited during the day and sleep behaviour. A higher proportion of daytime resting behaviour was significantly associated with a positive judgement bias, less repetitive behaviour and increased time spent coded as 'relaxed' across days by shelter staff. These results suggest that, in the context of a busy shelter environment, the ability to rest more during the day could be a sign of improved welfare. Considering the non-linear relationship between sleep and welfare in humans, the relationship between sleep and behavioural indicators of welfare, including judgement bias, in shelter dogs may be more complex than this study could detect.

Background The aim of the current study was to investigate the frequency of variations of the extensor tendons of the carpus and digits in the domestic dog ( Canis lupus familiaris ) with a reexamination of their insertions as well as the morphometric measurements of the tendons and the brachioradialis muscle. In total, we investigated 68 paired thoracic limbs of the domestic dog (16 females and 18 males) which were fixed in a 10% formalin solution. Results The extensor carpi radialis (ECR) tendons showed striking variations in both splitting and insertion sites. In 4.4% of dissections, ECR had three tendons. Of these tendons, the extra tendon either attached independently on the fourth metacarpal bone (one right) or joined its counterpart tendon at the distal end (cross-connections) (one bilateral). It is worth mentioning that one of the ECR tendons split into two or three slips which inserted on the first, second, third, or fourth metacarpal bone in 11 (16.2%) of the specimens. In addition, we found a long tendinous slip originating from the ECR tendons to digit II or III in 7.4% of the distal limbs. The most common type of contribution to digit III was a third tendon of the extensor digiti I et II (ED III) joining the extensor digitorum lateralis (EDL III) with a frequency of 17.6%. In other types of variations, the contribution to digit III was incomplete. A part of the abductor pollicis longus (APL) deep to the superficial part of the flexor retinaculum seemed to continue up to the flexor digitorum superficialis (FDS) tendon. Conclusions The rare intraspecific variations of the extensor tendons of the manus described in the current research are valuable from both clinical and phylogenetic perspectives. Nonetheless, their functional importance needs more studies.

Wolf ( Canis lupus ) is a species included in appendices of CITES and is often encountered in cases of alleged poaching and trafficking of their products. When such crimes are suspected, those involved may attempt to evade legal action by claiming that the animals involved are domestic dogs ( C. l. familiaris ). To respond effectively to such claims, law enforcement agencies require reliable and robust methods to distinguish wolves from dogs. Reported molecular genetic methods are either unreliable (mitogenome sequence based), or operationally cumbersome and require much DNA (un-multiplexed microsatellites), or financially expensive (genome wide SNP genotyping). We report on the validation of a panel of 12 ancestral informative single nucleotide polymorphism (SNP) markers for discriminating wolves from dogs. A SNaPshot multiplex genotyping system was developed for the panel, and 97 Mongolian wolves ( C. l. chanco ) and 108 domestic dogs were used for validation. Results showed this panel had high genotyping success (0.991), reproducibility (1.00) and origin assignment accuracy (0.97 ± 0.05 for dogs and 1.00 ± 0.03 for wolves). Species-specificity testing suggested strong tolerance to DNA contamination across species, except for Canidae. The minimum DNA required for reliable genotyping was 6.25 pg/μl. The method and established gene frequency database are available to support identification of wolves and dogs by law enforcement agencies.

Dogs have previously been shown to synchronise their behaviour with their owner and the aim of this study was to test the effect of immediate interactions, breed, and the effects of domestication. The behavioural synchronisation test was conducted in outdoor enclosures and consisted of 30 s where the owner/handler was walking and 30 s of standing still. Three studies were conducted to explore the effect of immediate interaction (study A), the effect of breed group (study B), and the effect of domestication (study C). In study A, a group of twenty companion dogs of various breeds were tested after three different human interaction treatments: Ignore , Pet , and Play . The results showed that dogs adjusted their movement pattern to align with their owner’s actions regardless of treatment. Furthermore, exploration, eye contact, and movement were all influenced by the owners moving pattern, and exploration also decreased after the Play treatment. In study B, the synchronisation test was performed after the Ignore treatment on three groups: 24 dogs of ancient dog breeds, 17 solitary hunting dogs, and 20 companion dogs (data from study A). Irrespective of the group, all dogs synchronised their moving behaviour with their owner. In addition, human walking positively influenced eye contact behaviour while simultaneously decreasing exploration behaviour. In study C, a group of six socialised pack-living wolves and six similarly socialised pack-living dogs were tested after the Ignore treatment. Interestingly, these animals did not alter their moving behaviour in response to their handler. In conclusion, dogs living together with humans synchronise with their owner’s moving behaviour, while wolves and dogs living in packs do not. Hence, the degree of interspecies behavioural synchronisation may be influenced by the extent to which the dogs are immersed in everyday life with humans.

Reputation is a key component in social interactions of group-living animals and appears to play a role in the establishment of cooperation. Animals can form reputations of individuals by directly interacting with them or by observing them interact with a third party, i.e., eavesdropping. Previous research has focused on whether dogs ( Canis lupus familiaris ) can eavesdrop on humans because of their ability to cooperate with humans, however the results are mixed and if they can eavesdrop, it is unknown whether this ability evolved during the domestication process or whether it was inherited from their ancestor, wolves ( Canis lupus ). Our study investigated whether equally hand-raised, pack-living dogs and wolves can form reputations of humans in a food-giving situation through indirect and/or direct experience. The experimental procedure comprised three parts: baseline (to test whether the subject preferred a person prior to the experiment), observation and testing. In the observation phase, the subject observed two humans interact with a dog demonstrator–one acted generously and fed the dog, and the other acted selfishly and refused to feed the dog. The subject could then choose which person to approach in the test phase. In the following experience phase, the animals interacted directly with the same two humans who behaved either in a generous or selfish manner. Then, they were again given a choice whom to approach. We found that dogs and wolves, at the group level, did not differentiate between a generous or selfish partner after indirect or direct experience, but wolves were more attentive towards the generous person during the observation phase and some dogs and wolves did prefer the generous partner, at least after indirect and direct experience was combined. Our study suggests that reputation formation may be more difficult than expected for animals and we emphasise the importance of context when studying reputation formation in animals.

This study investigates encounters between sled dogs (Canis lupus familiaris), humans, and Arctic wolves (Canis lupus arctos) in West and North Greenland. Using qualitative data from extensive interviews conducted in North Greenlandic, Polar Inuit, and Kalaallisut dialects, as well as a comprehensive review of relevant literature, this research aims to elucidate the spatial, temporal, and situational contexts of these interactions. Early accounts from European and American explorers, and observations made by local residents, complemented by Indigenous Kalaallit and Inughuit oral traditions, reveal the adaptive behaviors of wolves and their significant effects on human activities. Evidence of wolves in Greenland dates back to Saqqaq Culture (2400–1400 BC) and the Norse settlements (985–1450 AD) and continues into contemporary times. Greenlandic myths depict wolves as both feared and respected creatures, highlighting their profound cultural significance. Recent increases in wolf sightings near settlements in Avanersuaq have raised concerns about their impact on local fauna and human safety, prompting wildlife management measures. The study finds that Arctic wolves, humans, and sled dogs have interacted across various regions of North and West Greenland, with these interactions affecting both ecological dynamics and human practices. This research underscores the complex and evolving relationships between sled dogs, humans, and Arctic wolves, advocating for balanced conservation strategies that integrate scientific research with traditional knowledge. The findings contribute to the broader discourse on wildlife management in extreme environments, providing insights into the resilience of wolves and their enduring influence on human communities in the High Arctic and West Greenland. La présente étude porte sur les interactions entre les chiens de traîneau (Canis lupus familiaris), les humains et les loups arctiques (Canis lupus arctos) dans l’ouest et le nord du Groenland. S’appuyant sur des données qualitatives issues d’entretiens exhaustifs menés en langues nord-groenlandaise, inuite polaire et kalaallisut, ainsi que sur l’analyse exhaustive de la littérature pertinente, cette étude cherche à connaître les contextes spatiaux, temporels et situationnels de ces interactions. Des récits anciens d’explorateurs européens et américains, des observations réalisées par les habitants de la région ainsi que des traditions orales autochtones des Kalaallits et des Inughuits montrent comment les loups s’adaptent à leur environnement de même que leurs impacts importants sur les activités humaines. Les loups du Groenland ont fait l’objet d’observations depuis l’époque de la culture de Saqqaq (entre 2400 et 1400 ans avant l’ère commune) et les établissements norrois (entre 985 et 1450 de l’ère commune). Ils sont encore présents à l’ère actuelle. Les mythes groenlandais les décrivent comme des êtres à la fois redoutés et respectés, ce qui témoigne de leur grande importance culturelle. La hausse récente des observations de loups près de communautés d’Avanersuaq a suscité des inquiétudes quant à leur impact sur la faune locale et la sécurité des personnes. En réponse à ces préoccupations, des mesures de gestion de la faune ont été mises en place. Cette étude a révélé que les loups arctiques, les humains et les chiens de traîneau interagissent dans diverses régions du nord et de l’ouest du Groenland. Ces interactions ont un effet sur la dynamique écologique et les pratiques humaines. Cette recherche met en évidence les relations complexes et en constante évolution entre les chiens de traîneau, les humains et les loups arctiques. Elle revendique aussi des stratégies de conservation équilibrées tenant compte à la fois de la recherche scientifique et du savoir traditionnel. Nos constatations s’inscrivent dans un discours plus large sur la gestion de la faune dans les environnements extrêmes. Elles permettent d’en apprendre davantage sur la résilience des loups et sur leur influence durable sur les communautés humaines de l’Extrême-Arctique et de l’ouest du Groenland.