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result(s) for
"Chemical polymorphism"
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Comparative Chemical Profiles of the Essential Oils from Different Varieties of Psidium guajava L
by
El Gendy, Abd El-Nasser G.
,
Elshamy, Abdelsamed I.
,
Omer, Elsayed A.
in
Cancer
,
Chemical compounds
,
chemical polymorphism
2020
Guava (Psidium guajava) leaves are commonly used in the treatment of diseases. They are considered a waste product resulting from guava cultivation. The leaves are very rich in essential oils (EOs) and volatiles. This work represents the detailed comparative chemical profiles of EOs derived from the leaves of six guava varieties cultivated in Egypt, including Red Malaysian (RM), El-Qanater (EQ), White Indian (WI), Early (E), El-Sabahya El-Gedida (ESEG), and Red Indian (RI), cultivated on the same farm in Egypt. The EOs from the leaves of guava varieties were extracted by hydro-distillation and analyzed with GC-MS. The EOs were categorized in a holistic manner using chemometric tools. The hydro-distillation of the samples yielded 0.11–0.48% of the EO (v/w). The GC-MS analysis of the extracted EOs showed the presence of 38 identified compounds from the six varieties. The sesquiterpene compounds were recorded as main compounds of E, EQ, ESEG, RI, and WI varieties, while the RM variety attained the highest content of monoterpenes (56.87%). The sesquiterpenes, β-caryophyllene (11.21–43.20%), and globulol (76.17–26.42%) were detected as the major compounds of all studied guava varieties, while trans-nerolidol (0.53–10.14) was reported as a plentiful compound in all of the varieties except for the RM variety. A high concentration of D-limonene was detected in the EOs of the RM (33.96%), WI (27.04%), and ESEG (9.10%) varieties. These major compounds were consistent with those reported for other genotypes from different countries. Overall, the EOs’ composition and the chemometric analysis revealed substantial variations among the studied varieties that might be ascribed to genetic variability, considering the stability of the cultivation and climate conditions. Therefore, this chemical polymorphism of the studied varieties supports that these varieties could be considered as genotypes of P. guajava. It is worth mentioning here that the EOs, derived from leaves considered to be agricultural waste, of the studied varieties showed that they are rich in biologically active compounds, particularly β-caryophyllene, trans-nerolidol, globulol, and D-limonene. These could be considered as added value for pharmacological and industrial applications. Further study is recommended to confirm the chemical variations of the studied varieties at a molecular level, as well as their possible medicinal and industrial uses.
Journal Article
Molecular basis for amyloid-β polymorphism
by
Cascio, Duilio
,
Zhao, Minglei
,
Goldschmidt, Lukasz
in
Alzheimer Disease - etiology
,
Alzheimer Disease - metabolism
,
Alzheimers disease
2011
Amyloid-beta (Aβ) aggregates are the main constituent of senile plaques, the histological hallmark of Alzheimer’s disease. Aβ molecules form β-sheet containing structures that assemble into a variety of polymorphic oligomers, protofibers, and fibers that exhibit a range of lifetimes and cellular toxicities. This polymorphic nature of Aβ has frustrated its biophysical characterization, its structural determination, and our understanding of its pathological mechanism. To elucidate Aβ polymorphism in atomic detail, we determined eight new microcrystal structures of fiber-forming segments of Aβ. These structures, all of short, self-complementing pairs of β-sheets termed steric zippers, reveal a variety of modes of self-association of Aβ. Combining these atomic structures with previous NMR studies allows us to propose several fiber models, offering molecular models for some of the repertoire of polydisperse structures accessible to Aβ. These structures and molecular models contribute fundamental information for understanding Aβ polymorphic nature and pathogenesis.
Journal Article
Diversity of volatile emissions from Cork Oak: quantity and quality vary independently across its range
by
Staudt, Michael
,
Centre d’Ecologie Fonctionnelle et Evolutive (CEFE) ; École Pratique des Hautes Études (EPHE) ; Université Paris Sciences et Lettres (PSL)-Université Paris Sciences et Lettres (PSL)-Centre National de la Recherche Scientifique (CNRS)-Institut de Recherche pour le Développement (IRD [Occitanie])-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Institut Agro Montpellier ; Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Université de Montpellier (UM)-Université de Montpellier Paul-Valéry (UMPV)
,
Erdogan, Meltem
in
Air pollution
,
Allelochemicals
,
chemical polymorphism
2025
Knowledge of the intraspecific variability of volatiles produced by plants is central for estimating their fluxes from ecosystems and for understanding their evolution in an ecological and phylogenetic context. Past studies suggested that volatile emissions from Cork oak ( Quercus suber L.) exhibit a high degree of qualitative and quantitative polymorphism. However, the extent of inherent emission variability across its range is not known. We investigated leaf emissions, photosynthetic, and morphological traits of 241 Cork oak seedlings from ten provenances. To minimize environmental influences, emissions were determined at 30°C and saturating light on seed‐grown saplings of similar age grown under the same conditions. All individuals, except for three apparent non‐emitters, released the same five monoterpenes at a mean rate of 2559 ± 120 ng m −2 s −1 . Northern provenances tended to develop more sclerophyllous leaves with higher emission rates and lower photosynthetic rates than southern populations, resulting in significant different carbon losses by emissions. Independently, the emission composition varied discontinuously among individuals according to three distinct chemotypes, indicating inherent differences in the activity of two types of monoterpene synthases: one producing α‐, β‐pinene and sabinene, and the other limonene. Chemotype frequencies differed among provenances, particularly between South‐Eastern Mediterranean and South‐Western Atlantic provenances. Regarding leaf traits, we found no differences between chemotypes. The study confirms that Cork oak is a strong emitter of monoterpenes, the quality and quantity of which vary independently within its range. A comparison of the emission variability with that of other oak species suggests that a Pinene/sabinene chemotype is the ancestral form within the oak subgenus Cerris , which diversified during species radiation. This diversification is less pronounced in Cork oak than in other sympatric oaks, likely due to differential fragmentation and expansion of their ranges in the past.
Journal Article
Effect of altitude on essential oil composition and on glandular trichome density in three \Nepeta\ species (\N. sessilifolia\, \N. heliotropifolia\ and \N. fissa\)
by
Talebi, Seyed Mehdi
,
Khani, Musa
,
Nohooji, Majid Ghorbani
in
Altitude
,
altitudinal gradient
,
biochemical polymorphism
2019
In the current study, the trichome density and the chemical variation of the hydrodistillated essential oils were determined along the altitudinal gradient in Nepeta sessilifolia, N. heliotropifolia, and N. fissa. The capitate glandular trichomes were predominant in all populations studied. Denser leaves indumentum was observed in high altitude populations of N. heliotropifolia, and in low altitude populations of N. sessilifolia and N. fissa. Moreover, the inter-population chemical polymorphism was detected. In the lower population of N. sessilifolia, spathulenol (14.2%) was the major compound of essential oils. This oil had great amount of oxygenated sesquiterpene (35.3%), while the oil of high altitude population had great amount of diterpenes, namely phytol (32.8%). In N. fissa, the main compound in lower population was β-caryophyllene (33.1%), whereas in the higher population it was caryophyllene oxide (21.5%). In N. heliotropifolia, 1,8-cineole (20.1%) was as the principal oil compound in low altitude population and β-caryophyllene (18.8%) in the high altitude population. We suggested that the amount of different types of monoterpenes decreases along the altitudinal gradient and the amount of oxygenated compounds increases with the elevation.
Journal Article
Chemodiversity and antimicrobial activities of Eucalyptus spp. essential oils
by
Andres, Sonia
,
Soufan, Walid
,
Chahine, Mireille
in
Agricultural practices
,
agriculture
,
Agriculture & Environmental Sciences
2024
The essential oils extracted from the leaves of five Eucalyptus species: E. astringens, E. camaldulensis, E. lehmannii, E. leucoxylon, and E. sideroxylon, were investigated for their antimicrobial properties. These species were growing in the same plantation area, exposed to identical conditions, and subjected to uniform agronomic practices. Processed and analyzed under consistent parameters, the essential oil yields ranged from 0.14 to 0.96% (w/w). Chromatographic analysis were resolved into 48 compounds, with 11 common to all oils. Terpenoids (oxygenated mono- and sesquiterpenes) dominated the oil profiles, constituting 55.66-76.67% of the composition. Major components identified included 1,8-cineole (21.97-50.93%), α-pinene (2.18-15.95%), p-cymene (0.83-15.94%), spathulenol (0-20.49%), globulol (4.09-14.26%), and aromadendrene (2.37-15.03%). Genetically driven interspecific variation in composition was observed through Principal Component Analysis (PCA), Hierarchical Cluster Analysis (HCA), and heatmap clustering. Moreover, distinctive components were identified for each essential oil, offering a valuable tool for discriminating between Eucalyptus species and ensuring authentication and quality control in commercial samples. Results from antimicrobial disc-diffusion assays indicated robust antimicrobial activity in all essential oils, with those derived from E. camaldulensis, E. lehmannii, and E. leucoxylon exhibiting the highest effectiveness.
Journal Article
Essential Oil Biodiversity of Achillea ligustica All. Obtained from Mainland and Island Populations
by
Al-Shareef, Wajih
,
Bader, Ammar
,
Ascrizzi, Roberta
in
Acetic acid
,
Achillea ligustica
,
Asteraceae
2022
Background: The genus Achillea is rich in essential oil (EO) with high chemical diversity. In this study, eight EO samples obtained from flowers and leaves of Achillea ligustica All. collected on the Mediterranean mainland and island locations were analyzed to evaluate their possible chemical diversity. Methods: Sixteen samples of EO were analyzed by GC-MS, leading to the identification of 95 compounds in the leaves and 86 compounds in the flowers; a statistical analysis was performed to determine the chemical polymorphism. Results: Monoterpenes, such as β-pinene, borneol, ɑ-terpineol and isobornyl acetate, were more abundant in the continental samples, while the insular samples were richer in 1,8-cineole. Fragranyl acetate and fragranol were detected in remarkable concentrations in sample 8. The fruits of sample 8 were then cultivated under controlled agronomic conditions, providing plants rich in these compounds (sample 9). The geographical variability influenced the EO compositions, with unique observed chemotypes and a high degree of diversity among samples collected in various areas (mainland or island). Statistical analyses did not reveal any pattern between the geographical provenience and the compositions. Conclusion: Samples were distributed based on the plant organ, confirming the already reported high degree of chemical polymorphism of this species. Sample 8 could be used as a source of fragranol and fragranyl acetate, with potential applications in the insecticidal and pheromone industries.
Journal Article
Direct Link between mhc Polymorphism, T Cell Avidity, and Diversity in Immune Defense
2002
Major histocompatibility complex (mhc)-encoded molecules govern immune responses by presenting antigenic peptides to T cells. The extensive polymorphism of genes encoding these molecules is believed to enhance immune defense by broadening the array of antigenic peptides available for T cell recognition, but direct evidence supporting the importance of this mechanism in combating pathogens is limited. Here we link mhc polymorphism-driven diversification of the cytotoxic T lymphocyte (CTL) repertoire to the generation of high-avidity, protective antiviral T cells and to superior antiviral defense. Thus, much of the beneficial effect of the mhc polymorphism in immune defense may be due to its critical influence on the properties of the selected CTL repertoire.
Journal Article
Origanum syriacum Essential Oil Chemical Polymorphism According to Soil Type
by
Hattouny, Paul
,
Chahine, Ramez
,
Zgheib, Raviella
in
agricultural soils
,
arbuscular mycorrhizal fungi
,
biochemical polymorphism
2019
Background: Origanum syriacum L. is an aromatic plant growing wild in Lebanon. This species is highly used in Lebanese traditional medicine and is a staple food in Lebanese gastronomy. Due to the over-harvesting, this species has become a cultivated crop rather than being collected from the wild. This study aims to evaluate the chemical polymorphism according to soil type. Methods: Plant samples were cultivated in different soil types including manure, potting mix, professional agriculture mixture, vegetable compost, nursery soils, and natural agricultural soil inoculated with arbuscular mycorrhizal fungi. After 16 weeks of culture, fresh shoot biomass was measured. Root colonization rate was evaluated and foliar biomasses were used for essential oil (EO) extraction. EO yield was calculated and the identification of the main chemical compounds of EO samples was performed by gas chromatography (GC) and gas chromatography–mass spectrometry (GC/MS). Results: Our findings revealed that the soil type affects the O. syriacum chemotype. Indeed, the EO samples could be divided into two groups: thymol chemotype group including manure and vegetable compost soils and non-sterilized non-inoculated EO samples, and the thymol/carvacrol chemotype including potting mix, professional agriculture mixture, nursery mixture, sterilized non-inoculated, non-sterilized inoculated, and sterilized inoculated EO samples. These results showed that manure and vegetable compost soils promoted thymol synthesis, whereas potting mix, professional agriculture mixture, and nursery mixture soils were thymol/carvacrol chemotype. Moreover, mycorrhizal inoculation increased carvacrol and reduced thymol productions in comparison to non-inoculated conditions. Additionally, mycorrhizal inoculation showed significant enhancements in mycorrhizal rates and shoot biomass production with respect to the non-sterilized soil. Conclusions: These variations confirm the influence of the edaphic conditions on the chemical components biosynthesis pathways of oregano plants. The results of this investigation could be used for determining optimal soil type, leading to a good quality herb production.
Journal Article
Chemical Polymorphism in Defense Secretions during Ontogenetic Development of the Millipede Niponia nodulosa
by
Ichiki, Yayoi
,
Tanabe, Tsutomu
,
Asano, Yasuhisa
in
Acetonitriles - analysis
,
adults
,
Age Factors
2015
A mixture of defense compounds (benzaldehyde, benzoyl cyanide, benzoic acid, mandelonitrile, and mandelonitrile benzoate), found commonly in cyanogenic polydesmid millipedes, was identified in the non-cyanogenic millipede Niponia nodulosa. These compounds were major components in 1st–4th instars, but were absent in older instars and adults. Extracts of older instars and adults contained 1-octen-3-ol, 2-methyl-2-bornene, E-2-octen-1-ol, 2-methyl-isoborneol, and geosmin; these compounds were minor components in 1st–4th instars. This ontogenetic allomone shift may be explained by the high cost of biosynthesis of polydesmid compounds from L-phenylalanine being offset by their potency in protecting the insect during fragile and sensitive growth stages. However, as the cuticle hardens in older juveniles (5th, 6th, 7th instars) and adults, this allows for a switch in defense to using less effective and less costly volatile organic compounds (presumably microbial in origin) that are ubiquitous in the millipede’s habitat or are produced by symbiotic microbes and may be readily available through food intake or aspiration.
Journal Article
Comparative study of different molecular markers for classifying and establishing genetic relationships in Coffea canephora
by
Souza, Flávio de F
,
Ferrão, Luís Felipe V
,
Zambolim, Eunize M
in
Agricultural research
,
Alleles
,
Amplified fragment length polymorphism
2013
The genetic variability characterization of the accessions of the germplasm collection, using molecular markers, is being applied as a complementary strategy to the traditional approaches to redefine the plant genetic resources. In this study, we compared the informativeness and efficiency of the molecular markers RAPD, AFLP and SSR in the analysis of 94 accessions of Coffea canephora germplasm held by the breeding program of the Brazilian Agricultural Research Corporation (Embrapa), Rondônia State, Brazil. For this, we considered the marker’s discriminatory power and level of polymorphism detected and also the genetic relationships and clustering (dendrogram) analysis. The RAPD marker yielded low-quality data and problems in the discrimination of some accessions, being less recommended for genetic studies of C. canephora. The SSRs had a higher level of information content and yielded high-quality data, while AFLP was the most efficient marker system because of the simultaneous detection of abundant polymorphism markers per few reactions. Our results indicate that AFLP and SSR, allies to the intrinsic characteristics of each technique, are the most suitable molecular markers for genetic studies of C. canephora. However, the choice of AFLP or SSR in the species characterization should be made in agreement with some characteristics that are discussed in this work.
Journal Article