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Estimation of cochlear length is gaining attention in the field of cochlear implants (CIs), mainly for selecting of CI electrode lengths. The currently available tools to estimate the cochlear duct length (CDL) are only valid for normal inner anatomy. However, inner ear malformation (IEM) types are associated with different degrees of cystic apices, limiting the application of CDL equations of normal anatomy inner ear. Therefore, this study aimed to understand the degree to which the outer wall (OW) is observed in different malformation types and to formulate mathematical equations to estimate the OW length (OWL) from cochlear parameters, namely the basal turn diameter (A-value) and width (B-value). Three-dimensional (3D) segmentation of promontory and fluid parts of the inner ear was performed to understand the extent to which the OW is visible to measure the OWL manually. Enlarged vestibular aqueduct syndrome (EVAS) was diagnosed in 37 ears, which consistently showed the extent of the OW to an angular depth of 540°, beyond which the cystic apex starts. Incomplete partition (IP) type I was observed in 30 ears, with the OW extending to only 360° of angular depth. IP type II was observed in 35 ears, with the OW extending to 450° of angular depth. IP type III was identified in 24 ears, with the OW observed for 540° of angular depth. Cavity-type malformations were observed in 36 ears, and circumference was measured in the axial view. A strong positive linear correlation was observed between the manually measured OWL and cochlear parameters for all malformation types analyzed. A multiple linear regression model was applied to formulate mathematical equations, which was further used to create a software application for estimating OWLs in IEM types, using cochlear parameters as inputs.

Incomplete partition type II (IP-II) is frequently identified in ears with SLC26A4 mutations. Cochleae with IP-II are generally observed to have 1½ turns; the basal turns are normally formed, and the apical turn is dilated or cystic. The objective of this study was to characterize the pathomorphogenesis of the IP-II cochlear anomaly in Slc26a4-null mice. Otic capsules were dissected from Slc26a4Δ/+ and Slc26a4Δ/Δ mice at 1 and 8 days of age and at 1 and 3 months of age. X-ray micro-computed tomography was used to image samples. We used a multiplanar view and three-dimensional reconstructed models to calculate the cochlear duct length, cochlear turn rotation angle, and modiolus tilt angle. The number of inner hair cells was counted, and the length of the cochlear duct was measured in a whole-mount preparation of the membranous labyrinth. X-ray micro-computed tomography mid-modiolar planar views demonstrated cystic apical turns in Slc26a4Δ/Δ mice resulting from the loss or deossification of the interscalar septum, which morphologically resembles IP-II in humans. Planes vertical to the modiolus showed a similar mean rotation angle between Slc26a4Δ/+ and Slc26a4Δ/Δ mice. In contrast, the mean cochlear duct length and mean number of inner hair cells in Slc26a4Δ/Δ mice were significantly smaller than in Slc26a4Δ/+ mice. In addition, there were significant differences in the mean tilt angle and mean width of the modiolus. Our analysis of Slc26a4-null mice suggests that IP-II in humans reflects loss or deossification of the interscalar septum but not a decreased number of cochlear turns.

Auditory function and cochlear morphology have previously been described in the postnatal German waltzing guinea pig, a strain with recessive deafness. In the present study, cochlear histopathology was further investigated in the inner ear of the developing German waltzing guinea pig (gw/gw). The lumen of the cochlear duct diminished progressively from embryonic day (E) 35 to E45 and was absent at E50 because of the complete collapse of Reissner's membrane onto the hearing organ. The embryonic stria vascularis, consisting of a simple epithelium, failed to transform into the complex trilaminar tissue seen in normal animals and displayed signs of degeneration. Subsequent degeneration of the sensory epithelium was observed from E50 and onwards. Defective and insufficient numbers of melanocytes were observed in the developing gw/gw stria vascularis. A gene involved in cochlear melanocyte development, Pax3, was markedly reduced in lateral wall tissue of the cochlea of both E40 and adult gw/gw individuals, whereas its expression was normal in the skin and diaphragm muscle of adult gw/gw animals. The Pax3 gene may thus be involved in the pathological process but is unlikely to be the primary mutated gene in the German waltzing guinea pig. TUNEL assay showed no signs of apoptotic cell death in the developing stria vascularis of this type of guinea pig. Thus, malformation of the stria vascularis appears to be the primary defect in the inner ear of the German waltzing guinea pig. Defective and insufficient numbers of melanocytes might migrate to the developing stria vascularis but fail to provide the proper support for the subsequent development of marginal and basal cells, thereby leading to stria vascularis malformation and dysfunction in the inner ear of the German waltzing guinea pig.

Mutanlallemand (mtl) and Belly Spot and Deafness (bsd) are two new spontaneous alleles of the Lmx1a gene in mice. Homozygous mutants show head tossing and circling behaviour, indicative of vestibular defects, and they have short tails and white belly patches of variable size. The analysis of auditory brainstem responses (ABR) showed that mtl and bsd homozygotes are deaf, whereas heterozygous and wildtype littermates have normal hearing. Paint-filled inner ears at E16.5 revealed that mtl and bsd homozygotes lack endolymphatic ducts and semicircular canals and have short cochlear ducts. These new alleles show similarities with dreher (Lmx1a) mutants. Complementation tests between mtl and dreher and between mtl and bsd suggest that mtl and bsd are new mutant alleles of the Lmx1a gene. To determine the Lmx1a mutation in mtl and bsd mutant mice we performed PCR followed by sequencing of genomic DNA and cDNA. The mtl mutation is a single point mutation in the 3' splice site of exon 4 leading to an exon extension and the activation of a cryptic splice site 44 base pairs downstream, whereas the bsd mutation is a genomic deletion that includes exon 3. Both mutations lead to a truncated LMX1A protein affecting the homeodomain (mtl) or LIM2-domain (bsd), which is critical for LMX1A protein function. Moreover, the levels of Lmx1a transcript in mtl and bsd mutants are significantly down-regulated. Hmx2/3 and Pax2 expression are also down-regulated in mtl and bsd mutants, suggesting a role of Lmx1a upstream of these transcription factors in early inner ear morphogenesis. We have found that these mutants develop sensory patches although they are misshapen. The characterization of these two new Lmx1a alleles highlights the critical role of this gene in the development of the cochlea and vestibular system.

Abnormalities of pigmentation and of the inner ear occur together in inherited syndromes in several mammals, including man. The pigmentary abnormalities are always of the white spotting kind, which is distinct from albinism, although the entire skin and fur may be affected. The inner ear abnormalities are confined to the cochlea and the saccule, and follow a certain pattern. Recently, the author obtained some evidence suggesting that this association might be based on the common origin of the melanocytes and a part of the acoustic ganglion in the neural crest: the abnormalities of the ear were looked for in two spotted mutants in the mouse in which the neural crest had been experimentally shown to be abnormal, and they were found. The questions arose: how widespread were abnormalities of the ear in animals with spotting, and what were the requirements in size and locality of spots for the involvement of the ear? To answer these the inner ear was examined in mice of 15 genotypes covering a wide range with regard to the degree and locality of spotting. Abnormalities were found in all heavily spotted genotypes. Of much greater interest were the observations that the pigmentation of the inner ear was also always affected; that the spotting of the coat was not a good guide to this internal 'spotting'; and that the severity and extent of the inner ear abnormalities were much more closely related to the internal than to the external spotting. Moreover, most genotypes had their own pattern of internal ‘spotting’. No observation was made that was incompatible with the hypothesis that the neural crest might be the link between the two components of the syndrome. The chief alternative explanation, that the pigment or the pigment cells have some unknown function in the inner ear, cannot be entirely ruled out, but it has several weighty arguments against it. This study has also explained why the two components of the syndrome sometimes appear to be separated. It has shown that the problem of the nature and origin of spotting in mammals is even more complex than was thought before. The evolutionary significance of the relationship between pigmentation and the inner ear is pointed out.