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Background Colour vision in birds can be categorized into two classes, the ultraviolet (UVS) and violet sensitive (VS). Their phylogenetic distributions have traditionally been regarded as highly conserved. However, the complicated nature of acquiring spectral sensitivities from cone photoreceptors meant that until recently, only a few species had actually been studied. Whether birds are UVS or VS can nowadays be inferred from a wide range of species via genomic sequencing of the UV/violet SWS1 cone opsin gene. Results We present genomic sequencing results of the SWS1 gene from 21 avian orders. Amino acid residues signifying UV sensitivity are found in the two most important spectral tuning sites 86 and 90 of Pteroclidiformes and Coraciiformes, in addition to the major clades, Palaeognathae, Charadriiformes, Trogoniformes, Psittaciformes and Passeriformes, where they where previously known to occur. We confirm that the presumed UVS-conferring amino acid combination F86, C90 and M93 is common to Palaeognathae and unique to this clade, despite available spectrometric evidence showing the ostrich retina to be VS. Conclusions By mapping our results together with data from previous studies on a molecular phylogeny we show that avian colour vision shifted between VS and UVS at least 14 times. Single nucleotide substitutions can explain all these shifts. The common ancestor of birds most likely had a VS phenotype. However, the ancestral state of the avian SWS1 opsin’s spectral tuning sites cannot be resolved, since the Palaeognathae are F86, C90 while the Neognathae are ancestrally S86, S90. The phylogenetic distribution of UVS and VS colour vision in birds is so complex that inferences of spectral sensitivities from closely related taxa should be used with caution.

Aim: Kingfishers are the most species-rich family in the avian order, Coraciiformes. Their modern distribution is largely pantropical; however, global species diversity is unevenly distributed. For example, 19 of the 114 kingfisher species occur in New Guinea, whereas only six species occur in the entire New World. This disparity in diversity suggests regions with high species richness could represent the ancestral range of the family. Furthermore, some clades of kingfishers (Ceyx, Todiramphus) are thought to be the product of rapid insular radiations. Here, we investigated the biogeographical history and speciation dynamics of the Alcedinidae using a fully sampled molecular phylogeny. Location: Global. Taxon: Kingfishers (Aves: Coraciiformes: Alcedinidae). Methods: We inferred a time-calibrated, species-level phylogeny of kingfishers from DNA sequences. Our data set comprised up to five Sanger-sequenced gene regions for all species (one mitochondrial, one nuclear exon and three nuclear introns), plus genus-level sampling of thousands of ultraconserved elements. We estimated ancestral ranges of kingfishers and explored macroevolutionary rate shifts and diversification rates across the phylogeny. Results: We recovered a well-supported phylogeny of kingfishers that includes 34 species whose phylogenetic relationships were not previously known. The pygmykingfishers (subfamily Alcedininae) sit on a long branch, sister to all other kingfishers: subfamilies Cerylinae and Halcyoninae. Crown-group kingfishers originated in the Indomalayan region approximately 27 Ma with subsequent colonizations into Africa (six times), the New World (twice) and Australasia (representing several major radiations). Main conclusions: Oceanic islands of Wallacea, the Philippines and Oceania promoted multiple, independent radiations in three species-rich genera: Ceyx, Adenoides and Todiramphus. In particular, Todiramphus showed patterns consistent with explosive and recent diversification relative to the background speciation rate of non-Todiramphus kingfishers, which we attribute to recent colonization of the vast archipelagos of Wallacea and the Pacific.

Few regional or continent-wide assessments of bird use for traditional medicine have been attempted anywhere in the world. Africa has the highest known diversity of bird species used for this purpose. This study assesses the vulnerability of 354 bird species used for traditional medicine in 25 African countries, from 205 genera, 70 families, and 25 orders. The orders most represented were Passeriformes (107 species), Falconiformes (45 species), and Coraciiformes (24 species), and the families Accipitridae (37 species), Ardeidae (15 species), and Bucerotidae (12 species). The Barn owl (Tyto alba) was the most widely sold species (seven countries). The similarity of avifaunal orders traded is high (analogous to \"morphospecies\", and using Sørensen's index), which suggests opportunities for a common understanding of cultural factors driving demand. The highest similarity was between bird orders sold in markets of Benin vs. Burkina Faso (90%), but even bird orders sold in two geographically separated countries (Benin vs. South Africa and Nigeria vs. South Africa) were 87% and 81% similar, respectively. Rabinowitz's \"7 forms of rarity\" model, used to group species according to commonness or rarity, indicated that 24% of traded bird species are very common, locally abundant in several habitats, and occur over a large geographical area, but 10% are rare, occur in low numbers in specific habitats, and over a small geographical area. The order with the highest proportion of rare species was the Musophagiformes. An analysis of species mass (as a proxy for size) indicated that large and/or conspicuous species tend to be targeted by harvesters for the traditional medicine trade. Furthermore, based on cluster analyses for species groups of similar risk, vultures, hornbills, and other large avifauna, such as bustards, are most threatened by selective harvesting and should be prioritised for conservation action.

Insertion/deletion (indel) mutations, which are represented by gaps in multiple sequence alignments, have been used to examine phylogenetic hypotheses for some time. However, most analyses combine gap data with the nucleotide sequences in which they are embedded, probably because most phylogenetic datasets include few gap characters. Here, we report analyses of 12,030 gap characters from an alignment of avian nuclear genes using maximum parsimony (MP) and a simple maximum likelihood (ML) framework. Both trees were similar, and they exhibited almost all of the strongly supported relationships in the nucleotide tree, although neither gap tree supported many relationships that have proven difficult to recover in previous studies. Moreover, independent lines of evidence typically corroborated the nucleotide topology instead of the gap topology when they disagreed, although the number of conflicting nodes with high bootstrap support was limited. Filtering to remove short indels did not substantially reduce homoplasy or reduce conflict. Combined analyses of nucleotides and gaps resulted in the nucleotide topology, but with increased support, suggesting that gap data may prove most useful when analyzed in combination with nucleotide substitutions.

Biological studies on symmetry can be expanded to consider red (longer wavelengths) and blue (shorter wavelengths) shifts as antisymmetries (opposite-pattern symmetries), which may arise from similar underlying causes (invariant process symmetries). In this context, classic shift asymmetries of redder plumage in response to higher dietary carotenoids appear conceptually incomplete, as potential blue-shifted counterparts were not considered. A latent symmetric response is highlighted by recent evidence showing that the maximum absorbance bands of various colorful plumage pigments are red-shifted in birds with ultraviolet-sensitive (UVS) color vision but blue-shifted in those with violet-sensitive (VS) color vision. Blue-shifted responses to increased dietary carotenoid contents may also be underestimated, as relevant studies have focused on species-rich but uniformly UVS Passerida passerines. This study explored the relationship between pattern–process symmetries and diets of VS Piciformes–Coraciiformes by gauging the responses of their plumage reflectance to a modified diet index (Dietc), where the overall rank carotenoid contents of food items were weight-averaged by three levels of importance in a species’ diet. In the case of both sexes, the main long-wavelength reflectance band for the three carotenoid-based pigment classes defined the same graded series of blue shifts in response to higher Dietc. Yellow showed a strong absolute (negative slope) blue shift, orange showed a weaker absolute blue shift, and red exhibited only a blue shift (flat, non-significant slope) relative to absolute red shifts (positive slope). The secondary shorter-wavelength reflectance band was also unresponsive to Dietc in the VS Piciformes–Coraciiformes (relative blue shift) compared with earlier evidence for it decreasing (absolute red shift) at higher Dietc in UVS species. Results for the intervening minimum reflectance (maximum absorbance) band were intermediate between those for the other reflectance bands. No pigment class monopolized lower or higher Dietc, but red was less variable overall. Phylogenetic independence, sexually similar responses, and specimen preservation reinforced characterizations. A review of avian perceptual studies suggested that VS models discriminate yellows and oranges extremely well, consistent with the importance of the corresponding carotenoids as Dietc indicators. Both UVS and VS species appear to produce putatively more costly and possibly beneficial carotenoid metabolites and/or concentrations in response to higher Dietc, supporting underlying invariant processes in relation to carotenoid limitations and honest signaling despite opposite plumage shifts and their different chemical bases. In symmetry parlance, pigment classes (red) or wavebands (short) that lack responses to Dietc suggest broken pattern and process symmetry. The biology of VS Piciformes–Coraciiformes may favor such exceptions owing to selection for visual resemblance and tuning specializations, although universal constraints on physical and chemical properties of (particularly red) carotenoids may favor certain functional tendencies. Thus, symmetry principles organize carotenoid diversity into a simplified and predictive framework linked to color vision.

Sultanpur National Park is a famous fresh water low lying wetland and is the oldest national park of the Haryana, India. It is bestowed with huge variety of avian species. To assess the diversity and conservation status of avian species in the Sultanpur National Park, the present study was conducted from February to July 2022 in morning (06:00–10:00 a.m.) and evening hours (4:00–6:00 p.m.). During the visit a total of 1130 individuals belonging to 149 species, 55 families and 19 orders were identified. Amongst 19 orders, asseriformes was reported to be most diverse, followed by Charadriiformes, Anseriformes, Pelecaniformes, Accipitriformes, Cuculiformes, Gruiformes and Coraciiformes, Columbiformes, Suliformes and Piciformes, Galliformes, Strigiformes. Out of total number of species, 137 species were represented as Least Concerned, 9 Near-threatened, 2 Vulnerable and 1 Endangered. In all 55 species were reported uncommon followed by 39 common, 28 occasional, 15 rare and 12 abundant. The Sultanpur National Park is facing large scale habitat fragmentation, disturbance and degradation due to various anthropogenic activities in the vicinity.

Recent observations from the tropics indicate seasonal peaks in breeding and vocal activity of some bird species. However, information about seasonality in vocal activity at the community level is still lacking in the tropics. We examined seasonal variation in the diurnal vocal activity of lowland rain forest birds on Mount Cameroon, using weekly automatic sound recording throughout the whole year and related it to rainfall and temperature. We show that the bird community in lowland rain forest vocalized year-round, but species richness as well as the vocal activity of the community varied greatly during the year. This variation coincided with the seasonality of rainfall. The highest number of species (31.5 on average) sang at the beginning of the driest period, followed by a gradual decrease in singing with increasing rainfall (minimum 14.5 species). This indicates that intensive rainfall indirectly limits the vocal activity of the tropical rain-forest bird community. Temporal turnover of vocalizing species as well as within-day variation in vocal activity was highest during the transition period between dry and rainy seasons. We suggest that this could reflect differing timing in the breeding activity of particular feeding guilds to follow seasonal peaks of their diets.

Forty-one belted kingfishers, Megaceryle alcyon (Linnaeus) (Aves: Coraciiformes: Alcedinidae), from Manitoba, Canada were examined for ectoparasites in 1995–2020. One species of chewing louse, Alcedoffula alcyonae Carriker (Phthiraptera: Ischnocera: Philopteridae), infested 48.8% of hosts. The mean intensity of infestation was 17.1, and mean abundance was 8.5 lice per bird. Distribution of infestation was highly aggregated. Although female lice outnumbered males, the sex ratio was not significantly different from 1.0. The ratio of nymphs to females was 2.6. An unidentified species of feather mite of the genus Proterothrix Gaud (Acari: Astigmatina: Proctophyllodidae) infested three of 35 hosts (8.6%). No mites were found in the quills of primary feathers from 19 birds, and no nasal mites were collected from 32.

Forestry management can shape the structure of habitat types and have important biological consequences on the composition of biodiversity. This study focused on Momotus lessonii and Eumomota superciliosa, two potential bioindicators of local and wide scale tropical forest alterations. The study took place in the Karen Mogensen Wildlife Refuge (Costa Rica), a protected area characterized by two main forest habitats where the two species coexist, i.e., primary moist and second-growth dry forest. A distance sampling method was used to obtain density estimates for each species. A spot mapping approach showed an apparent partitioning of the two species at the site. The Kilometric Abundance Index (KAI) and statistical analyses revealed significant differences between the two habitats, i.e., E. superciliosa tended to be more abundant and preferred the dry forest, whilst M. lessonii favored moist environments. The development of arid and semi-arid environments characterized by open areas will probably lead to a numerical increase in E. superciliosa with a consequent expansion, while the decline of moister and homogeneously forested environments will likely affect negatively M. lessonii. We argue that these birds will act as bioindicators of local and global environmental changes, and their monitoring will enable appropriate forest management decisions for conservation purposes.

Birds kept in zoological institutions are highly exposed to gastrointestinal (GI) parasitism caused by coccidia and nematodes. The current research aimed to characterize the avian GI parasitic fauna in several zoological collections in Portugal and Spain. During the full year of 2022, a total of 120 fecal samples were collected from four zoological institutions: Lisbon Zoo, Olivais Pedagogical Farm, and Avian Biodiversity Center (Lisbon, Portugal), and Avifauna park (Lugo, Spain). Analysis was conducted in domestic bird species (autochthonous and exotic poultry breeds), and 18 different exotic bird species like Galliformes (peacock, pheasant), Anseriformes (duck), Psittaciformes (parrot, macaw, cockatiel, parakeet, cockatoo), Coraciiformes (motmot), Charadriiformes (avocet), Strigiformes (owl), Phoenicopteriformes (flamingo), Struthioniformes (ostrich), Rheiformes (rhea), and Casuariiformes (emu, cassowary). Feces were processed using Mini-FLOTAC (MF), to identify parasitic forms and quantify their shedding (oocysts or eggs per gram of feces). Moreover, 15 fecal samples from pheasants were also processed using the McMaster method (McM), to compare the parasite shedding and frequencies between techniques. MF implementation allowed identification of coccidia infections in all bird collections. Also, peacocks of the Lisbon Zoo tested positive for Trichostrongylus tenuis and Strongyloides pavonis, and the exotic birds from Avifauna park were also positive for several nematode species, with Ascaridia sp., Capillaria sp., Strongyloides sp., and Syngamus trachea eggs being detected in pheasants’ feces. Moreover, the analysis of pheasants’ feces with MF detected prevalences of 33% for coccidia oocysts, and 47% for Capillaria sp. and Ascaridia sp. eggs, while McM detected prevalences of 13%, 27%, and 40% for the respective parasite taxa, with no differences being observed between methods (p = 0.39, p = 0.45, and p = 0.50, respectively). This research provided more scientific support regarding the importance of using Mini-FLOTAC in routine parasitological diagnosis in birds kept at zoological institutions.