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Coccidia (Chromista: Miozoa: Eimeriidae) of columbiform birds (Aves: Columbiformes) have been described since the end of the nineteenth century; however, some of these descriptions were poorly detailed or inconclusive. In this sense, the current work makes a detailed taxonomic revision reconsidering and organizing 18 Eimeria spp. and two Isospora spp. previously described or reported of Columbiformes. Along with this, a new species of Eimeria is morphologically and molecularly identified by the mitochondrial cytochrome c oxidase subunit 1 (COI) gene and by the 18S small subunit ribosomal RNA (18S) gene from the ruddy ground-dove Columbina talpacoti (Temminck, 1809) in the Médio Paraíba region of the State of Rio de Janeiro, southeastern Brazil. Eimeria columbinae n. sp. has subspheroidal oocysts, 14.7 × 13.2 μm, with smooth, bi-layered wall, ~ 1.1 μm and length/width ratio of 1.1. Micropyle and oocyst residuum are present, but polar granule is absent. Sporocysts are ellipsoidal to slightly asymmetrical, 9.0 × 5.1 μm, with both Stieda and sub-Stieda bodies. Sporocyst residuum present and sporozoites with refractile body and nucleus. This is the 19th description of an eimerian from Columbiformes in the World, and the second to have a molecular identification of the COI and 18S genes.

Purpose Coccidia (Coccidiasina) is a subclass of Apicomplexa, known to cause gastrointestinal diseases in animals. Although its importance is recognized, there are few taxonomic studies of coccidia in fish, especially in biomes with high diversity, such as the Brazilian Amazon. Therefore, the present study investigated infections by coccidian microparasites found in the hepatic region of the Coco sea catfish, Bagre bagre . Methods Parasitological analyses were performed on 50 specimens of B. bagre collected in Bragança and Curuça, in northern Brazil, between January and December 2021. Results Infections caused by coccidiosis were identified in 35 of these specimens, which were infected by parasites of the genus Calyptospora , including both sporulated and non-sporulated forms in the hepatic stroma of the hosts. The oocysts were spherical (mean diameter: 10.52 ± 0.29 μm) and contained four spheroid sporocysts (mean diameter: 4.22 ± 0.23 μm). A consensus sequence (1,320 bp) of the SSU rDNA gene from these parasites was compared with GenBank sequences of other species of the class Coccidiomorphea and the genetic distances indicated that they represented a new species. Conclusion The combination of the morphometric and phylogenetic evidence supports conclusively the existence of a new species of the genus Calyptospora , which is denominated Calyptospora matosi n. sp.

An unusual coccidian parasite was described previously from the prostate of a male Antechinus flavipes (family: Dasyuridae; common name: yellow-footed antechinus). Morphometrics and a partial nuclear 18S small subunit rDNA (18S rDNA) sequence were used to assign this parasite to the genus Eimeria; it was named Eimeria taggarti. We generated full nuclear 18S rDNA and mitochondrial genome sequences from this parasite and used the newly completed 18S rDNA and mitochondrial cytochrome c oxidase subunit I (COI) sequences to perform a more in-depth phylogenetic analysis. The parasite clustered closely with Choleoeimeria spp. and Acroeimeria spp. infecting herptiles in a well-supported clade that was the sister lineage to the Eimeriidae sensu stricto. The mitochondrial genome of this parasite contained 2 inverted segments compared to mitochondrial genomes from parasites in the Eimeriidae sensu stricto (i.e., Stieda body-possessing coccidia with 4 dizoic sporocysts); this mitochondrial genome arrangement was shared with the only Choleoeimeria species for which sequence data were available publicly. Examination of histological preparations and TEM images uncovered bivalvate sporocysts and otherwise confirmed previously described morphological features of the parasite. Based on our phylogenetic analyses and histological observations, we propose the generic reclassification of E. taggarti to Choleoeimeria taggarti n. comb.

The curious skink, Carlia ailanpalai Zug, occurs in the main group of the Admiralty Islands of Papua New Guinea but has also successfully invaded Guam, the Marianas, Yap, and Kosrae. A single coccidian, Eimeria zugi McAllister, Duszynski, Fisher, & Austin, 2013 was described from C. ailanpalai from Papua New Guinea. No additional coccidians are known from this host. Fourteen C. ailanpalai were collected from Cocos Island (Islan Dåno), Guam, U.S. Territory, and their feces examined for coccidians. A single skink (7%) was found to be passing oöcysts of a new species of Choleoeimeria. Oöcysts of Choleoeimeria cocosensisn. sp. are ellipsoidal to ovoidal with a bi-layered wall, measure (L × W) 21.1 × 12.9 µm, and have a length/width (L/W) ratio of 1.6; a micropyle and an oocyst residuum were absent but fragmented polar granule(s) was present. Sporocysts are ovoidal and measure 8.6 × 6.3 µm, L/W 1.4; Stieda, sub-Stieda, and para-Stieda bodies were absent. Sporocyst residuum was typically a loose aggregate of various-sized granules between and across the sporozoites but sometimes a dense irregular mass between and across the sporozoites. Sporozoites were elongate, with a centrally located nucleus and a large spheroidal to subspheroidal posterior refractile body, but without an anterior refractile body. The new species can be differentiated from all other choleoeimerians from skinks by possessing one of the smallest oöcysts known from the host family. We also provide an updated summation of the choleoeimerians from skinks of the world. This article was registered in the Official Register of Zoological Nomenclature (ZooBank) as urn:lsid:zoobank.org:pub:6EFDF027-0A92-43C4-9AD0-E555252E7741.

Legless lizards (Amphisbaenia) belong to a group of mostly legless squamates that include about 196 species. One genus (Bipes) retains a pair of forelimbs, but all other 19 genera in the clade are limbless. They are widely distributed, occurring in the Middle East and the Caribbean and nearly all of the major continents (except Australia). Only 2/6 (33%) families, 3/20 (15%) genera, and 4/195 (2%) species in the Amphisbaenia clade of the Sauria have been examined for coccidia and 8 coccidia species are now known. Here, we summarize information on the 8 species of coccidia (3 Choleoeimeria, 1 Eimeria, 4 Isospora) reported from legless lizards of the world. In addition, Eimeria amphisbaeniarum Huntington, Cisper, Smith, Powell, Parmerlee Jr., and Lathrop, 1996, is placed in the genus Choleoeimeria. We speculate that another 380 intestinal coccidia infecting this unique reptilian lineage wait to be discovered.

In March and April 2016, 150 white perch (Morone americana) were collected from various localities in Chesapeake Bay and examined for coccidia. A previously undescribed species of coccidia was observed in the hepatic bile ducts and gallbladder of all white perch (100%) examined. We describe this species using morphological characteristics, histology, and gene sequences of the small-subunit ribosomal DNA (rDNA), large-subunit rDNA, and mitochondrial genes cytochrome oxidase 1 (COI), cytochrome oxidase b (Cytb), and cytochrome oxidase 3 (COIII). Oocysts of Goussia bayae n. sp. were subspherical with a single-layered smooth wall and measured (length [L] × width [W]) 26.2 × 21.8 µm, with a L/W ratio of 1.2. A micropyle was present but a micropyle cap, polar granules, and oocyst residuum were absent. Each oocyst contained 4 sporocysts that were ellipsoidal and measured (L × W) 12.6 × 7.8 µm, with a L/W ratio of 1.6. A pair of sporozoites was present, but sporocysts lacked a Stieda body and residuua. Meronts and gamonts were epicellular in biliary epithelial cells and oocysts were coelozoic in hepatic and common bile ducts and gallbladder. This is the first report of Goussia spp. from white perch and the first mitochondrial DNA sequence reported from a Goussia species. Phylogenetic analysis indicates basal placement of G. bayae to Eimeriidae, Choleoeimeria, and Sarcocystidae.

A new Caryospora-like isolate is described from a magpie-lark (Grallina cyanoleuca) in Western Australia. Sporulated oocysts of the Caryospora-like isolate (n = 35) are subspherical with a shape index of 1.13 ((21.5 (19.7–23.6) × 19.0 (18.1–19.8) μm). The bilayered oocyst wall is smooth. Micropyle, polar granule and oocyst residuum are absent. The sporocyst is ellipsoidal, 18.9 (17.2–20.8) × 12.3 (11.9–12.8) μm, with a shape index (length/width) of 1.54. The sporocyst wall is bilayered. Stieda and substieda bodies are present, the Stieda body is small and flattened and the substieda is trapezoidal. Sporocyst with eight sporozoites arranged head to tail. The sporozoites are vermiform, 18.9 (17.2–20.8) × 12.3 (11.9–12.8) μm and have striations at the anterior end. Each sporozoite has both anterior and posterior refractile bodies. A sporocyst residuum is present. Molecular characterization of the isolated Caryospora-like oocysts was conducted at the 18S ribosomal RNA and the mitochondrial cytochrome oxidase (COI) loci. At the 18S rRNA locus, the Caryospora-like isolate exhibited 88.8% to 96.5% similarity with other Caryospora spp. from different hosts. At the COI locus, it showed 91.5% similarity to Caryospora cf. bigenetica JB-2013 (KF859856) from the rattlesnake, Sistrurus catenatus.

A novel species of coccidia, resembling a member of the genus Eimeria, was found in bats, Scotophilus leucogaster, collected in southern Saudi Arabia has been described on the basis of unsporulated oocysts and DNA sequencing of the Internal Transcribed Spacer 1 (ITS1) and partial 18S rDNA regions. Unsporulated oocysts of this form are ovoidal to spheroidal and had a 2-layered wall, 1.5–2.0 (1.9 ± 0.2); the outer layer was light blue with striations, and thicker than the inner, darker layer. No micropyle was present. Unsporulated oocysts (N = 150) measured 27.2 × 22.1 (25–30 × 20–25), length width ratio, 1.2 (1.1–1.4). There was no evidence of an oocyst residuum and/or polar granule. This parasite was detected in 2/7 (29%) S. leucogaster collected from southern Saudi Arabia. Oocysts incubated at 25 °C in 2.5% K2Cr2O7 did not sporulate after > 1 month. Unsporulated oocyst measurements were compared with other coccidian parasites of bats that discharge oocysts in their feces. Sequences of the ITS1 and the 18S rDNA regions obtained from the unsporulated oocysts grouped this coccidium from S. leucogaster with eimerian species from various rodent and squirrel species. It is critical that future investigators obtain fully sporulated oocysts of this coccidium for full description of the parasite recovered in our study so it can be correctly assigned to genus and given an accurate binomial.

Oocysts of a coccidian morphologically matching features of Caryospora megafalconis Klüh, 1994 were found in fecal samples and contents of the large intestines in five wild caught Clamydotis macqueenii (Gray) and 19 captive bred C. undulata (Jaquin). Scrapings of the intestinal mucosa of necropsied birds revealed macrogamonts and unsporulated oocysts. Sporulation in a potassium dichromate solution at 26 °C was completed in 48 h. Intestinal contents and sporulated oocysts obtained from feces of infected bustards as well as sporulated oocysts of C. megafalconis and C. neofalconis Böer, 1982 from two Falco rusticolis Linnaeus and one F. peregrinus Tunstall were used for DNA sequencing of the cox1, 18S ribosomal ribonucleic acid (rRNA), and 28S rRNA genes. The phylogenetic trees for all three genes showed that sequences of the material from bustards were identical with C. megafalconis from falcons. C. neofalconis and C. daceloe Yang et al., 2014 were situated in the neighboring clades. Contrary to this, subsequent sequences of C. bigenetica Wacha and Christiansen, 1982 from rattlesakes are at a distinct distance suggesting that despite morphological similarities of the oocysts, there are differences between Caryospora species of birds and reptiles. For this reason, it might be reasonable to transfer avian Caryospora species into a new genus Avispora.

Coprological examination of 15 samples of the rough-tailed gecko Cyrtopodion scabrum collected from Abu Rawash, Giza, Egypt, revealed that 20 % (3/15) were passing oocysts of a new Choleoeimeria species. Oocysts of Choleoeimeria scabrumi n. sp. are ellipsoidal with a smooth, yellow to orange, bilayered smooth wall, measure 26 × 13 μm, and have a length/width (L/W) ratio of 1.8. Polar granule, micropyle and oocyst residuum are absent. Sporocysts are ellipsoidal and 8 × 5 μm and the sporocyst wall has two plates joined by a longitudinal suture. Stieda, substieda and parastieda bodies are absent. The endogenous development is confined to the gallbladder epithelium. Mature meronts are subspheroidal and 11–13 × 8–10 μm. Macrogamonts are mostly spheroidal and 12–14 μm wide, with a prominent nucleus in the centre. Microgamonts are irregular in shape, 9–11 × 5–7 μm. Based on the morphological features of the oocysts and the endogenous development in the gallbladder epithelium, we identified this biliary coccidium to be a new species in the genus Choleoeimeria.