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33,584 result(s) for "Electronic Structure Theory"
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Tomographic imaging of molecular orbitals
Single-electron wavefunctions, or orbitals, are the mathematical constructs used to describe the multi-electron wavefunction of molecules. Because the highest-lying orbitals are responsible for chemical properties, they are of particular interest. To observe these orbitals change as bonds are formed and broken is to observe the essence of chemistry. Yet single orbitals are difficult to observe experimentally, and until now, this has been impossible on the timescale of chemical reactions. Here we demonstrate that the full three-dimensional structure of a single orbital can be imaged by a seemingly unlikely technique, using high harmonics generated from intense femtosecond laser pulses focused on aligned molecules. Applying this approach to a series of molecular alignments, we accomplish a tomographic reconstruction of the highest occupied molecular orbital of N2. The method also allows us to follow the attosecond dynamics of an electron wave packet.
Density functional theory in the solid state
Density functional theory (DFT) has been used in many fields of the physical sciences, but none so successfully as in the solid state. From its origins in condensed matter physics, it has expanded into materials science, high-pressure physics and mineralogy, solid-state chemistry and more, powering entire computational subdisciplines. Modern DFT simulation codes can calculate a vast range of structural, chemical, optical, spectroscopic, elastic, vibrational and thermodynamic phenomena. The ability to predict structure-property relationships has revolutionized experimental fields, such as vibrational and solid-state NMR spectroscopy, where it is the primary method to analyse and interpret experimental spectra. In semiconductor physics, great progress has been made in the electronic structure of bulk and defect states despite the severe challenges presented by the description of excited states. Studies are no longer restricted to known crystallographic structures. DFT is increasingly used as an exploratory tool for materials discovery and computational experiments, culminating in ex nihilo crystal structure prediction, which addresses the long-standing difficult problem of how to predict crystal structure polymorphs from nothing but a specified chemical composition. We present an overview of the capabilities of solid-state DFT simulations in all of these topics, illustrated with recent examples using the CASTEP computer program.
Exponentially more precise quantum simulation of fermions in second quantization
We introduce novel algorithms for the quantum simulation of fermionic systems which are dramatically more efficient than those based on the Lie-Trotter-Suzuki decomposition. We present the first application of a general technique for simulating Hamiltonian evolution using a truncated Taylor series to obtain logarithmic scaling with the inverse of the desired precision. The key difficulty in applying algorithms for general sparse Hamiltonian simulation to fermionic simulation is that a query, corresponding to computation of an entry of the Hamiltonian, is costly to compute. This means that the gate complexity would be much higher than quantified by the query complexity. We solve this problem with a novel quantum algorithm for on-the-fly computation of integrals that is exponentially faster than classical sampling. While the approaches presented here are readily applicable to a wide class of fermionic models, we focus on quantum chemistry simulation in second quantization, perhaps the most studied application of Hamiltonian simulation. Our central result is an algorithm for simulating an N spin-orbital system that requires gates. This approach is exponentially faster in the inverse precision and at least cubically faster in N than all previous approaches to chemistry simulation in the literature.
Ordering of Trotterization: Impact on Errors in Quantum Simulation of Electronic Structure
Trotter–Suzuki decompositions are frequently used in the quantum simulation of quantum chemistry. They transform the evolution operator into a form implementable on a quantum device, while incurring an error—the Trotter error. The Trotter error can be made arbitrarily small by increasing the Trotter number. However, this increases the length of the quantum circuits required, which may be impractical. It is therefore desirable to find methods of reducing the Trotter error through alternate means. The Trotter error is dependent on the order in which individual term unitaries are applied. Due to the factorial growth in the number of possible orderings with respect to the number of terms, finding an optimal strategy for ordering Trotter sequences is difficult. In this paper, we propose three ordering strategies, and assess their impact on the Trotter error incurred. Initially, we exhaustively examine the possible orderings for molecular hydrogen in a STO-3G basis. We demonstrate how the optimal ordering scheme depends on the compatibility graph of the Hamiltonian, and show how it varies with increasing bond length. We then use 44 molecular Hamiltonians to evaluate two strategies based on coloring their incompatibility graphs, while considering the properties of the obtained colorings. We find that the Trotter error for most systems involving heavy atoms, using a reference magnitude ordering, is less than 1 kcal/mol. Relative to this, the difference between ordering schemes can be substantial, being approximately on the order of millihartrees. The coloring-based ordering schemes are reasonably promising—particularly for systems involving heavy atoms—however further work is required to increase dependence on the magnitude of terms. Finally, we consider ordering strategies based on the norm of the Trotter error operator, including an iterative method for generating the new error operator terms added upon insertion of a term into an ordered Hamiltonian.
Electron correlation methods based on the random phase approximation
In the past decade, the random phase approximation (RPA) has emerged as a promising post-Kohn–Sham method to treat electron correlation in molecules, surfaces, and solids. In this review, we explain how RPA arises naturally as a zero-order approximation from the adiabatic connection and the fluctuation-dissipation theorem in a density functional context. This is contrasted to RPA with exchange (RPAX) in a post-Hartree–Fock context. In both methods, RPA and RPAX, the correlation energy may be expressed as a sum over zero-point energies of harmonic oscillators representing collective electronic excitations, consistent with the physical picture originally proposed by Bohm and Pines. The extra factor 1/2 in the RPAX case is rigorously derived. Approaches beyond RPA are briefly summarized. We also review computational strategies implementing RPA. The combination of auxiliary expansions and imaginary frequency integration methods has lead to recent progress in this field, making RPA calculations affordable for systems with over 100 atoms. Finally, we summarize benchmark applications of RPA to various molecular and solid-state properties, including relative energies of conformers, reaction energies involving weak and covalent interactions, diatomic potential energy curves, ionization potentials and electron affinities, surface adsorption energies, bulk cohesive energies and lattice constants. RPA barrier heights for an extended benchmark set are presented. RPA is an order of magnitude more accurate than semi-local functionals such as B3LYP for non-covalent interactions rivaling the best empirically parametrized methods. Larger but systematic errors are observed for processes that do not conserve the number of electron pairs, such as atomization and ionization.
Exact decoupling of the relativistic Fock operator
It is generally acknowledged that the inclusion of relativistic effects is crucial for the theoretical description of heavy-element-containing molecules. Four-component Dirac-operator-based methods serve as the relativistic reference for molecules and highly accurate results can be obtained—provided that a suitable approximation for the electronic wave function is employed. However, four-component methods applied in a straightforward manner suffer from high computational cost and the presence of pathologic negative-energy solutions. To remove these drawbacks, a relativistic electron-only theory is desirable for which the relativistic Fock operator needs to be exactly decoupled. Recent developments in the field of relativistic two-component methods demonstrated that exact decoupling can be achieved following different strategies. The theoretical formalism of these exact-decoupling approaches is reviewed in this paper followed by a comparison of efficiency and results.
A chemical dynamics study on the gas-phase formation of triplet and singlet C₅H₂ carbenes
Since the postulation of carbenes by Buchner (1903) and Staudinger (1912) as electron-deficient transient species carrying a divalent carbon atom, carbenes have emerged as key reactive intermediates in organic synthesis and in molecular mass growth processes leading eventually to carbonaceous nanostructures in the interstellar medium and in combustion systems. Contemplating the short lifetimes of these transient molecules and their tendency for dimerization, free carbenes represent one of the foremost obscured classes of organic reactive intermediates. Here,we afford an exceptional glance into the fundamentally unknown gas-phase chemistry of preparing two prototype carbenes with distinct multiplicities—triplet pentadiynylidene (HCCCCCH) and singlet ethynylcyclopropenylidene (c-C₅H₂) carbene—via the elementary reaction of the simplest organic radical—methylidyne (CH)—with diacetylene (HCCCCH) under single-collision conditions. Our combination of crossed molecular beam data with electronic structure calculations and quasi-classical trajectory simulations reveals fundamental reaction mechanisms and facilitates an intimate understanding of bond-breaking processes and isomerization processes of highly reactive hydrocarbon intermediates. The agreement between experimental chemical dynamics studies under single-collision conditions and the outcome of trajectory simulations discloses that molecular beam studies merged with dynamics simulations have advanced to such a level that polyatomic reactions with relevance to extreme astrochemical and combustion chemistry conditions can be elucidated at the molecular level and expanded to higher-order homolog carbenes such as butadiynylcyclopropenylidene and triplet heptatriynylidene, thus offering a versatile strategy to explore the exotic chemistry of novel higherorder carbenes in the gas phase.
Benchmarking of machine learning interatomic potentials for reactive hydrogen dynamics at metal surfaces
Simulations of chemical reaction probabilities in gas surface dynamics require the calculation of ensemble averages over many tens of thousands of reaction events to predict dynamical observables that can be compared to experiments. At the same time, the energy landscapes need to be accurately mapped, as small errors in barriers can lead to large deviations in reaction probabilities. This brings a particularly interesting challenge for machine learning interatomic potentials, which are becoming well-established tools to accelerate molecular dynamics simulations. We compare state-of-the-art machine learning interatomic potentials with a particular focus on their inference performance on CPUs and suitability for high throughput simulation of reactive chemistry at surfaces. The considered models include polarizable atom interaction neural networks (PaiNN), recursively embedded atom neural networks (REANN), the MACE equivariant graph neural network, and atomic cluster expansion potentials (ACE). The models are applied to a dataset on reactive molecular hydrogen scattering on low-index surface facets of copper. All models are assessed for their accuracy, time-to-solution, and ability to simulate reactive sticking probabilities as a function of the rovibrational initial state and kinetic incidence energy of the molecule. REANN and MACE models provide the best balance between accuracy and time-to-solution and can be considered the current state-of-the-art in gas-surface dynamics. PaiNN models require many features for the best accuracy, which causes significant losses in computational efficiency. ACE models provide the fastest time-to-solution, however, models trained on the existing dataset were not able to achieve sufficiently accurate predictions in all cases.
A Critical Look at Density Functional Theory in Chemistry: Untangling Its Strengths and Weaknesses
Density functional theory (DFT) is a commonly used methodology favored by experts and non-experts alike. It is a useful tool for the investigation of atomic, molecular and surface systems, offering an efficient and often reliable approach to calculate ground state properties such as electron density, total energy and molecular structure. However, fundamental issues are not rare. Of course, no one can really question the bold impact of DFT on modern chemical science. It is not only the way research is conducted that has been influenced by DFT, but also textbooks, datasets and our chemical intuition as well. In this review, issues pertaining to DFT are discussed, and it is pointed out that without a clear understanding of why we use calculations, an effective combination of experiment and theory will never be accomplished. Using low-level theoretical frameworks surely does not shed light on profound problems. To excel in our scientific field and make good use of our tools, we must very carefully decide which methodologies we are to employ.
A Bayesian framework for adsorption energy prediction on bimetallic alloy catalysts
For high-throughput screening of materials for heterogeneous catalysis, scaling relations provides an efficient scheme to estimate the chemisorption energies of hydrogenated species. However, conditioning on a single descriptor ignores the model uncertainty and leads to suboptimal prediction of the chemisorption energy. In this article, we extend the single descriptor linear scaling relation to a multi-descriptor linear regression models to leverage the correlation between adsorption energy of any two pair of adsorbates. With a large dataset, we use Bayesian Information Criteria (BIC) as the model evidence to select the best linear regression model. Furthermore, Gaussian Process Regression (GPR) based on the meaningful convolution of physical properties of the metal-adsorbate complex can be used to predict the baseline residual of the selected model. This integrated Bayesian model selection and Gaussian process regression, dubbed as residual learning, can achieve performance comparable to standard DFT error (0.1 eV) for most adsorbate system. For sparse and small datasets, we propose an ad hoc Bayesian Model Averaging (BMA) approach to make a robust prediction. With this Bayesian framework, we significantly reduce the model uncertainty and improve the prediction accuracy. The possibilities of the framework for high-throughput catalytic materials exploration in a realistic setting is illustrated using large and small sets of both dense and sparse simulated dataset generated from a public database of bimetallic alloys available in Catalysis-Hub.org.