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result(s) for
"Environmental stress"
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Explicit Calculations of Wet‐Bulb Globe Temperature Compared With Approximations and Why It Matters for Labor Productivity
2022
Wet‐bulb globe temperature (WBGT) is a widely applied heat stress index. However, most applications of WBGT within the heat stress impact literature that do not use WBGT at all, but use one of the ad hoc approximations, typically the simplified WBGT (sWBGT) or the environmental stress index (ESI). Surprisingly, little is known about how well these approximations work for the global climate and climate change settings that they are being applied to. Here, we assess the bias distribution as a function of temperature, humidity, wind speed, and radiative conditions of both sWBGT and ESI relative to a well‐validated, explicit physical model for WBGT developed by Liljegren, within an idealized context and the more realistic setting of ERA5 reanalysis data. sWBGT greatly overestimates heat stress in hot‐humid areas. ESI has much smaller biases in the range of standard climatological conditions. Over subtropical dry regions, both metrics can substantially underestimate extreme heat. We show systematic overestimation of labor loss by sWBGT over much of the world today. We recommend discontinuing the use of sWBGT. ESI may be acceptable for assessing average heat stress or integrated impact over a long period like a year, but less suitable for health applications, extreme heat stress analysis, or as an operational index for heat warning, heatwave forecasting, or guiding activity modification at the workplace. Nevertheless, Liljegren's approach should be preferred over these ad hoc approximations and we provide a fast Python implementation to encourage its widespread use. Plain Language Summary Wet‐bulb globe temperature (WBGT) is a widely applied heat stress index. However, most applications of WBGT within the climate change heat stress impact literature that do not use WBGT at all but use one of the ad hoc approximations, typically the simplified WBGT (sWBGT) or sometimes the environmental stress index (ESI). But we know little about how well these approximations work for measuring heat stress. Here, we evaluate the performance of sWBGT and ESI against a well‐validated, explicit physical model of WBGT. sWBGT greatly overestimates heat stress under a hot, humid climate. ESI performs much better in measuring average heat stress. But they both may seriously underestimate severe heat stress, especially in hot, dry regions. Our results suggest that previous studies using sWBGT tend to dramatically overestimate heat stress and its economic and health implications, which may further misinform policymaking. We recommend discontinuing the use of sWBGT. ESI may be acceptable for assessing average heat stress, but less suitable for the warning or forecasting of extreme heat, or providing guidance for dealing with workplace heat stress. Nevertheless, the well‐validated physical model of WBGT should be preferred over these approximations and we provide a Python implementation to encourage its widespread use. Key Points We evaluate biases of two common approximations to Wet‐bulb globe temperature (WBGT) in comparison with explicitly calculated WBGT and consider labor implications Simplified WBGT generally overestimates heat stress and resulting labor loss, whereas environmental stress index is less biased. Both methods underestimate peak heat stress Both methods are systematically biased. We offer a computationally efficient Python implementation to encourage accurate WBGT calculations
Journal Article
Factors affecting the production of sugarcane yield and sucrose accumulation: suggested potential biological solutions
by
Wang, Wenzhi
,
Zhang, Shuzhen
,
Peng, Lishun
in
Agricultural production
,
Bacteria
,
Bioaccumulation
2024
Environmental stresses are the main constraints on agricultural productivity and food security worldwide. This issue is worsened by abrupt and severe changes in global climate. The formation of sugarcane yield and the accumulation of sucrose are significantly influenced by biotic and abiotic stresses. Understanding the biochemical, physiological, and environmental phenomena associated with these stresses is essential to increase crop production. This review explores the effect of environmental factors on sucrose content and sugarcane yield and highlights the negative effects of insufficient water supply, temperature fluctuations, insect pests, and diseases. This article also explains the mechanism of reactive oxygen species (ROS), the role of different metabolites under environmental stresses, and highlights the function of environmental stress-related resistance genes in sugarcane. This review further discusses sugarcane crop improvement approaches, with a focus on endophytic mechanism and consortium endophyte application in sugarcane plants. Endophytes are vital in plant defense; they produce bioactive molecules that act as biocontrol agents to enhance plant immune systems and modify environmental responses through interaction with plants. This review provides an overview of internal mechanisms to enhance sugarcane plant growth and environmental resistance and offers new ideas for improving sugarcane plant fitness and crop productivity.
Journal Article
Genome-wide analysis of wheat xyloglucan endotransglucosylase/hydrolase (XTH) gene family revealed TaXTH17 involved in abiotic stress responses
2024
Background
Environmental stresses, including high salinity and drought, severely diminish wheat yield and quality globally. The xyloglucan endotransglucosylase/hydrolase (XTH) family represents a class of cell wall-modifying enzymes and plays important roles in plants growth, development and stress adaptation. However, systematic analyses of XTH family genes and their functions under salt and drought stresses have not been undertaken in wheat.
Results
In this study, we identified a total of 135
XTH
genes in wheat, which were clustered into three evolutionary groups. These
TaXTHs
were unevenly distributed on 21 chromosomes of wheat with a majority of
TaXTHs
located on homelogous groups 2, 3 and 7. Gene duplication analysis revealed that segmental and tandem duplication were the main reasons for the expansion of
XTH
family in wheat. Interaction network predictions indicated that TaXTHs could interact with multiple proteins, including three kinases, one methyltransferase and one gibberellin-regulated protein. The promoters of the
TaXTH
genes harbored various cis-acting elements related to stress and hormone responses. RNA-seq data analyses showed that some
TaXTH
genes were induced by salt and drought stresses. Furthermore, we verified that
TaXTH17
was induced by abiotic stresses and phytohormone treatments, and demonstrated that TaXTH17 was localized in the secretory pathway and cell wall. Functional analyses conducted in heterologous expression systems and in wheat established that
TaXTH17
plays a negative role in plant resistance to salt and drought.
Conclusions
We identified 135
XTH
genes in wheat and conducted comprehensive analyses of their phylogenetic relationships, gene structures, conserved motifs, gene duplication events, chromosome locations, interaction networks, cis-acting elements and gene expression patterns. Furthermore, we provided solid evidence supporting the notion that
TaXTH17
plays a negative role in plant resistance to salt and drought stresses. Collectively, our results provide valuable insights into understanding wheat
XTHs
, particularly their involvement in plant stress responses, and establish a foundation for further functional and mechanistic studies of
TaXTHs
.
Journal Article
Plant Proteoforms Under Environmental Stress: Functional Proteins Arising From a Single Gene
by
Renaut, Jenny
,
Klíma, Miroslav
,
Kosová, Klára
in
Acylation
,
Alternative splicing
,
Amino acid sequence
2021
Proteins are directly involved in plant phenotypic response to ever changing environmental conditions. The ability to produce multiple mature functional proteins, i.e., proteoforms, from a single gene sequence represents an efficient tool ensuring the diversification of protein biological functions underlying the diversity of plant phenotypic responses to environmental stresses. Basically, two major kinds of proteoforms can be distinguished: protein isoforms, i.e., alterations at protein sequence level arising from posttranscriptional modifications of a single pre-mRNA by alternative splicing or editing, and protein posttranslational modifications (PTMs), i.e., enzymatically catalyzed or spontaneous modifications of certain amino acid residues resulting in altered biological functions (or loss of biological functions, such as in non-functional proteins that raised as a product of spontaneous protein modification by reactive molecular species, RMS). Modulation of protein final sequences resulting in different protein isoforms as well as modulation of chemical properties of key amino acid residues by different PTMs (such as phosphorylation, N - and O -glycosylation, methylation, acylation, S -glutathionylation, ubiquitinylation, sumoylation, and modifications by RMS), thus, represents an efficient means to ensure the flexible modulation of protein biological functions in response to ever changing environmental conditions. The aim of this review is to provide a basic overview of the structural and functional diversity of proteoforms derived from a single gene in the context of plant evolutional adaptations underlying plant responses to the variability of environmental stresses, i.e., adverse cues mobilizing plant adaptive mechanisms to diminish their harmful effects.
Journal Article
Transcription factors enhancing synthesis of recombinant proteins and resistance to stress in Yarrowia lipolytica
2023
Resistance to environmental stress and synthesis of recombinant proteins (r-Prots) are both complex, strongly interconnected biological traits relying on orchestrated contribution of multiple genes. This, in turn, makes their engineering a challenging task. One of the possible strategies is to modify the operation of transcription factors (TFs) associated with these complex traits. The aim of this study was to examine the potential implications of selected five TFs (HSF1-YALI0E13948g, GZF1-YALI0D20482g, CRF1-YALI0B08206g, SKN7-YALI0D14520g, and YAP-like-YALI0D07744g) in stress resistance and/or r-Prot synthesis in Yarrowia lipolytica. The selected TFs were over-expressed or deleted (OE/KO) in a host strain synthesizing a reporter r-Prot. The strains were subjected to phenotype screening under different environmental conditions (pH, oxygen availability, temperature, and osmolality), and the obtained data processing was assisted by mathematical modeling. The results demonstrated that growth and the r-Prot yields under specific conditions can be significantly increased or decreased due to the TFs’ engineering. Environmental factors “awakening” individual TFs were indicated, and their contribution was mathematically described. For example, OE of Yap-like TF was proven to alleviate growth retardation under high pH, while Gzf1 and Hsf1 were shown to serve as universal enhancers of r-Prot production in Y. lipolytica. On the other hand, KO of SKN7 and HSF1 disabled growth under hyperosmotic stress. This research demonstrates the usefulness of the TFs engineering approach in the manipulation of complex traits and evidences newly identified functions of the studied TFs.Key points• Function and implication in complex traits of 5 TFs in Y. lipolytica were studied.• Gzf1 and Hsf1 are the universal r-Prots synthesis enhancers in Y. lipolytica.• Yap-like TF’s activity is pH-dependent; Skn7 and Hsf1 act in osmostress response.
Journal Article
The potential of melatonin and its crosstalk with other hormones in the fight against stress
2024
Climate change not only leads to high temperatures, droughts, floods, storms and declining soil quality, but it also affects the spread and mutation of pests and diseases, which directly influences plant growth and constitutes a new challenge to food security. Numerous hormones like auxin, ethylene and melatonin, regulate plant growth and development as well as their resistance to environmental stresses. To mitigate the impact of diverse biotic and abiotic stressors on crops, single or multiple phytohormones in combination have been applied. Melatonin is a multifunctional signaling molecule engaged in the development and stress response of plants. In the current review, we discuss the synthesis and action of melatonin, as well as its utilization for plant resistance to different stresses from the perspective of practical application. Simultaneously, we elucidate the regulatory effects and complex mechanisms of melatonin and other plant hormones on the growth of plants, explore the practical applications of melatonin in combination with other phytohormones in crops. This will aid in the planning of management strategies to protect plants from damage caused by environmental stress.
Journal Article
Mitigation of Environmental Stress-Impacts in Plants: Role of Sole and Combinatory Exogenous Application of Glutathione
by
Koh, Yi Sze
,
Tan, Khang Wei
,
Zengin, Gokhan
in
Abiotic stress
,
Agricultural production
,
Ascorbic acid
2021
Glutathione (GSH; γ-glutamyl-cysteinyl-glycine), a low-molecular-weight thiol, is the most pivotal metabolite involved in the antioxidative defense system of plants. The modulation of GSH on the plant in response to environmental stresses could be illustrated through key pathways such as reactive oxygen species (ROS) scavenging and signaling, methylglyoxal (MG) detoxification and signaling, upregulation of gene expression for antioxidant enzymes, and metal chelation and xenobiotic detoxification. However, under extreme stresses, the biosynthesis of GSH may get inhibited, causing an excess accumulation of ROS that induces oxidative damage on plants. Hence, this gives rise to the idea of exploring the use of exogenous GSH in mitigating various abiotic stresses. Extensive studies conducted borne positive results in plant growth with the integration of exogenous GSH. The same is being observed in terms of crop yield index and correlated intrinsic properties. Though, the improvement in plant growth and yield contributed by exogenous GSH is limited and subjected to the glutathione pool [GSH/GSSG; the ratio of reduced glutathione (GSH) to oxidized glutathione (GSSG)] homeostasis. Therefore, recent studies focused on the sequenced application of GSH was performed in order to complement the existing limitation. Along with various innovative approaches in combinatory use with different bioactive compounds (proline, citric acid, ascorbic acid, melatonin), biostimulants (putrescine, Moringa leaf extract, selenium, humic acid), and microorganisms (cyanobacteria) have resulted in significant improvements when compared to the individual application of GSH. In this review, we reinforced our understanding of biosynthesis, metabolism and consolidated different roles of exogenous GSH in response to environmental stresses. Strategy was also taken by focusing on the recent progress of research in this niche area by covering on its individualized and combinatory applications of GSH prominently in response to the abiotic stresses. In short, the review provides a holistic overview of GSH and may shed light on future studies and its uses.
Journal Article
The influence of stress factors on selected phenotypic and genotypic features of Listeria monocytogenes – a pilot study
by
Wiktorczyk-Kapischke, Natalia
,
Gospodarek-Komkowska, Eugenia
,
Grudlewska-Buda, Katarzyna
in
Acids
,
Ampicillin
,
Analysis
2023
Background
Listeria monocytogenes
are Gram-positive rods, widespread in the environment due to their wide tolerance to changing conditions. The apilot study aimed to assess the impact of six various stresses (heat, cold, osmotic, acid, alkali, frozen) on phenotypic features: MIC of antibiotics (penicillin, ampicillin, meropenem, erythromycin, co-trimoxazole; gradient stripes), motility, ability to form a biofilm (crystal violet method) and growth rate (OD and quantitative method), expression level of
sigB
(stress induced regulator of genes),
agrA, agrB
(associated with biofilm formation) and
lmo2230, lmo0596
(acid and alkali stress) (qPCR) for three strains of
L. monocytogenes
.
Results
Applied stress conditions contributed to changes in phenotypic features and expression levels of
sigB
,
agrA
,
agrB
,
lmo2230
and
lmo0596
. Stress exposure increased MIC value for penicillin (ATCC 19111 - alkaline stress), ampicillin (472CC - osmotic, acid, alkaline stress), meropenem (strains: 55 C - acid, alkaline, o smotic, frozen stress; 472CC - acid, alkaline stress), erythromycin (strains: 55 C - acid stress; 472CC - acid, alkaline, osmotic stress; ATCC 19111 - osmotic, acid, alkaline, frozen stress), co-trimoxazole (strains: 55 C - acid stress; ATCC 19111 - osmotic, acid, alkaline stress). These changes, however, did not affect antibiotic susceptibility. The strain 472CC (a moderate biofilm former) increased biofilm production after exposure to all stress factors except heat and acid. The ATCC 19111 (a weak producer) formed moderate biofilm under all studied conditions except cold and frozen stress, respectively. The strain 55 C became a strong biofilm producer after exposure to cold and produced a weak biofilm in response to frozen stress. Three tested strains had lower growth rate (compared to the no stress variant) after exposure to heat stress. It has been found that the
sigB
transcript level increased under alkaline (472CC) stress and the
agrB
expression increased under cold, osmotic (55 C, 472CC), alkali and frozen (472CC) stress. In contrast,
sigB
transcript level decreased in response to acid and frozen stress (55 C),
lmo2230
transcript level after exposure to acid and alkali stress (ATCC 19111), and
lmo0596
transcript level after exposure to acid stress (ATCC 19111).
Conclusions
Environmental stress changes the ability to form a biofilm and the MIC values of antibiotics and affect the level of expression of selected genes, which may increase the survival and virulence of
L. monocytogenes
. Further research on a large
L. monocytogenes
population is needed to assess the molecular mechanism responsible for the correlation of antibiotic resistance, biofilm formation and resistance to stress factors.
Journal Article
Biological invasions alter consumer–stress relationships along an estuarine gradient
2022
Estuaries represent steep stress gradients for aquatic organisms, with abiotic stress due to temperature and salinity typically increasing with distance into estuary. Invertebrate communities and their predators are strongly influenced by these stress gradients. The environmental stress model predicts that the importance of predation in structuring communities decreases with increasing environmental stress. Estuaries contain a stress gradient for marine organisms this includes salinity, temperature, and other abiotic properties. Additionally, estuaries are hotspots for biological invasions; increased stress tolerance among nonnative species could change the predictions of the environmental stress model. In this study, we investigate how introduced species alter the predictions of the environmental stress model by examining the effects of predators on sessile invertebrates across an estuarine gradient. To do this, we deployed recruitment plates across the estuarine gradient of Tomales Bay, California, USA using various caging treatments over the summer of 2019. We found that the effect of predation changed across sites, with the mid-estuary site experiencing the greatest reductions in prey abundance and prey species richness when exposed to predators. This was likely to be due to higher proportions of non-native prey and predator taxa mid-estuary, including solitary ascidians, which are highly susceptible to predation. Overall, predation did not follow the predictions of the environmental stress model, but rather followed the abundance of functional groups with non-native species, whose distribution could be mediated by environmental stress gradients. We suggest that this may be a general result and that communities subject to large numbers of stress-tolerant invaders may have high rates of consumption in high stress areas, contrasting predictions by previous models.
Journal Article
From Trash to Luxury: The Potential Role of Plant LncRNA in DNA Methylation During Abiotic Stress
by
Thiebaut, Flávia
,
Ferreira, Paulo Cavalcanti Gomes
,
Hemerly, Adriana Silva
in
Abiotic stress
,
Cellular stress response
,
Deoxyribonucleic acid
2021
Remarkable progress has been made in elucidating important roles of plant non-coding RNAs. Among these RNAs, long noncoding RNAs (lncRNAs) have gained widespread attention, especially their role in plant environmental stress responses. LncRNAs act at different levels of gene expression regulation, and one of these mechanisms is by recruitment of DNA methyltransferases or demethylases to regulate the target gene transcription. In this mini-review, we highlight the function of lncRNAs, including their potential role in RNA-directed DNA Methylation (RdDM) silencing pathway and their potential function under abiotic stresses conditions. Moreover, we also present and discuss studies of lncRNAs in crops. Finally, we propose a path outlook for future research that may be important for plant breeding.
Journal Article