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result(s) for
"Error source analysis"
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Internal validation of self-reported case numbers in hospital quality reports: preparing secondary data for health services research
by
Ji, Limei
,
Geraedts, Max
,
de Cruppé, Werner
in
Committees
,
Compliance
,
Cross-field validation
2024
Background
Health services research often relies on secondary data, necessitating quality checks for completeness, validity, and potential errors before use. Various methods address implausible data, including data elimination, statistical estimation, or value substitution from the same or another dataset. This study presents an internal validation process of a secondary dataset used to investigate hospital compliance with minimum caseload requirements (MCR) in Germany. The secondary data source validated is the German Hospital Quality Reports (GHQR), an official dataset containing structured self-reported data from all hospitals in Germany.
Methods
This study conducted an internal cross-field validation of MCR-related data in GHQR from 2016 to 2021. The validation process checked the validity of reported MCR caseloads, including data availability and consistency, by comparing the stated MCR caseload with further variables in the GHQR. Subsequently, implausible MCR caseload values were corrected using the most plausible values given in the same GHQR. The study also analysed the error sources and used reimbursement-related Diagnosis Related Groups Statistic data to assess the validation outcomes.
Results
The analysis focused on four MCR procedures. 11.8–27.7% of the total MCR caseload values in the GHQR appeared ambiguous, and 7.9–23.7% were corrected. The correction added 0.7–3.7% of cases not previously stated as MCR caseloads and added 1.5–26.1% of hospital sites as MCR performing hospitals not previously stated in the GHQR. The main error source was this non-reporting of MCR caseloads, especially by hospitals with low case numbers. The basic plausibility control implemented by the Federal Joint Committee since 2018 has improved the MCR-related data quality over time.
Conclusions
This study employed a comprehensive approach to dataset internal validation that encompassed: (1) hospital association level data, (2) hospital site level data and (3) medical department level data, (4) report data spanning six years, and (5) logical plausibility checks. To ensure data completeness, we selected the most plausible values without eliminating incomplete or implausible data. For future practice, we recommend a validation process when using GHQR as a data source for MCR-related research. Additionally, an adapted plausibility control could help to improve the quality of MCR documentation.
Journal Article
Error Source Analysis and Correction of GF-3 Polarimetric Data
2018
The GaoFen-3 (GF-3) satellite is the first polarimetric synthetic aperture radar (PolSAR) satellite in China. With a designed in-orbit life of 8 years, it will provide large amounts of PolSAR data for ocean monitoring, disaster reduction, and many other applications. The polarimetric data quality is essential for all these applications, so the analysis and calibration of the polarimetric error sources are very important for GF-3. In this study, we established a full-link error model for GF-3 PolSAR system. Based on this model, we comprehensively analyzed the quantitative effects of the main error sources including the composition, figured out characteristics of the phase imbalance introduced by the antenna, and pointed out the error sources which have to be corrected. Furthermore, the polarimetric correction method for GF-3 PolSAR system is proposed. Finally, assisted by several external calibration experiments, polarimetric errors of GF-3 data are efficiently corrected during in-orbit-test phase.
Journal Article
Geo-Positioning Accuracy Improvement of Multi-Mode GF-3 Satellite SAR Imagery Based on Error Sources Analysis
2018
The GaoFen-3 (GF-3) satellite is the only synthetic aperture radar (SAR) satellite in the High-Resolution Earth Observation System Project, which is the first C-band full-polarization SAR satellite in China. In this paper, we proposed some error sources-based weight strategies to improve the geometric performance of multi-mode GF-3 satellite SAR images without using ground control points (GCPs). To get enough tie points, a robust SAR image registration method and the SAR-features from accelerated segment test (SAR-FAST) method is used to achieve the image registration and tie point extraction. Then, the original position of these tie points in object-space is calculated with the help of the space intersection method. With the dataset clustered by the density-based spatial clustering of applications with noise (DBSCAN) algorithm, we undertake the block adjustment with a bias-compensated rational function model (RFM) aided to improve the geometric performance of these multi-mode GF-3 satellite SAR images. Different weight strategies are proposed to develop the normal equation matrix according to the error sources analysis of GF-3 satellite SAR images, and the preconditioned conjugate gradient (PCG) method is utilized to solve the normal equation. The experimental results indicate that our proposed method can improve the geometric positioning accuracy of GF-3 satellite SAR images within 2 pixels.
Journal Article
Analysis of Main Error Sources for the Error Motion Measurement of a Precision Shafting Using a T-Type Capacitive Sensor
2022
As a key indicator reflecting the working accuracy of rotary functional units, the error motions of the precision shafting are very necessary to be measured. In this paper, the main error sources for the error motion measurement of a precision shafting using a T-type capacitive sensor were investigated. The theoretical modeling error due to the approximate simplification for the output capacitance expressions was firstly analyzed. By means of the 3D-FEA method, the influence of fringe effects was subsequently investigated. Finally, the analysis of electrode installation errors was emphasized on the tilt error of the cylindrical electrode and coaxiality error of the fan-shaped electrode by establishing mathematical models and numerical simulation. Based on the theoretical analysis and simulation results, the methods of decreasing the approximate error and the nonlinear error caused by fringe effects were subsequently proposed; for the installation errors, the tilt error of cylindrical electrode only makes the solution of phase angle have a certain deviation and has almost no effect on solving the radial displacement, especially for the measurement range less than 0.1 mm; the measurement of the rotor tilt displacement was basically not affected by the coaxiality error of the fan-shaped electrode.
Journal Article
A real-time accuracy prediction model on time-relative positioning method considering the correlation of position increment errors
2024
Time-relative positioning (TRP), a global navigation satellite system (GNSS) dead reckoning method with low-cost and highly autonomous characteristics, accumulates the position increments calculated by time-differenced carrier phase (TDCP) between adjacent epochs to extrapolate position. It suffers from error accumulation over time, so it is necessary to judge the availability of positioning services based on predicted accuracy. We propose a new model to predict the accuracy (the root-mean-square error, RMSE) of TRP in real time by determining systematical errors and random errors. The proposed model consists of the following two steps: first, extracting the systematic errors and correlation of position increment errors before position extrapolation; second, predicting RMSE of the positioning results based on the error propagation law during position extrapolation. The experimental results show that after considering the correlation, the predicted RMSE sequences can envelop the actual positioning error more closely. In the case of having static observation before position extrapolation, the predicted RMSEs of extrapolation position in both horizontal and vertical directions decrease by approximately 53.8% compared to the results without considering correlation; in the case where real-time kinematic (RTK) dynamic results are obtained before extrapolation, the predicted RMSE of extrapolation position can decrease by 36.7% in horizontal direction and decrease by 27.9% in vertical direction. The proposed model will be able to provide an important accuracy reference to judge the availability of positioning services when the TRP method is used to extrapolate position under the condition of the augmentation information of RTK interruption.
Journal Article
Quality Control of Pesticide Residue Measurements and Evaluation of Their Results
by
Szemánné-Dobrik, Henriett
,
Doan, Vy Vy Ngoc
,
Vásárhelyi, Adrienn
in
Accuracy
,
Concept Paper
,
Evaluation
2023
Pesticide residues are monitored in many countries around the world. The main aims of the programs are to provide data for dietary exposure assessment of consumers to pesticide residues and for verifying the compliance of the residue concentrations in food with the national or international maximum residue limits. Accurate residue data are required to reach valid conclusions in both cases. The validity of the analytical results can be achieved by the implementation of suitable quality control protocols during sampling and determination of pesticide residues. To enable the evaluation of the reliability of the results, it is not sufficient to test and report the recovery, linearity of calibration, the limit of detection/quantification, and MS detection conditions. The analysts should also pay attention to and possibly report the selection of the portion of sample material extracted and the residue components according to the purpose of the work, quality of calibration, accuracy of standard solutions, and reproducibility of the entire laboratory phase of the determination of pesticide residues. The sources of errors potentially affecting the measured residue values and the methods for controlling them are considered in this article.
Journal Article
Sequencing DNA with nanopores: Troubles and biases
2021
Oxford Nanopore Technologies’ (ONT) long read sequencers offer access to longer DNA fragments than previous sequencer generations, at the cost of a higher error rate. While many papers have studied read correction methods, few have addressed the detailed characterization of observed errors, a task complicated by frequent changes in chemistry and software in ONT technology. The MinION sequencer is now more stable and this paper proposes an up-to-date view of its error landscape, using the most mature flowcell and basecaller. We studied Nanopore sequencing error biases on both bacterial and human DNA reads. We found that, although Nanopore sequencing is expected not to suffer from GC bias, it is a crucial parameter with respect to errors. In particular, low-GC reads have fewer errors than high-GC reads (about 6% and 8% respectively). The error profile for homopolymeric regions or regions with short repeats, the source of about half of all sequencing errors, also depends on the GC rate and mainly shows deletions, although there are some reads with long insertions. Another interesting finding is that the quality measure, although over-estimated, offers valuable information to predict the error rate as well as the abundance of reads. We supplemented this study with an analysis of a rapeseed RNA read set and shown a higher level of errors with a higher level of deletion in these data. Finally, we have implemented an open source pipeline for long-term monitoring of the error profile, which enables users to easily compute various analysis presented in this work, including for future developments of the sequencing device. Overall, we hope this work will provide a basis for the design of better error-correction methods.
Journal Article
NGmerge: merging paired-end reads via novel empirically-derived models of sequencing errors
2018
Background
Advances in Illumina DNA sequencing technology have produced longer paired-end reads that increasingly have sequence overlaps. These reads can be merged into a single read that spans the full length of the original DNA fragment, allowing for error correction and accurate determination of read coverage. Extant merging programs utilize simplistic or unverified models for the selection of bases and quality scores for the overlapping region of merged reads.
Results
We first examined the baseline quality score - error rate relationship using sequence reads derived from PhiX. In contrast to numerous published reports, we found that the quality scores produced by Illumina were not substantially inflated above the theoretical values, once the reference genome was corrected for unreported sequence variants. The PhiX reads were then used to create empirical models of sequencing errors in overlapping regions of paired-end reads, and these models were incorporated into a novel merging program, NGmerge. We demonstrate that NGmerge corrects errors and ambiguous bases better than other merging programs, and that it assigns quality scores for merged bases that accurately reflect the error rates. Our results also show that, contrary to published analyses, the sequencing errors of paired-end reads are not independent.
Conclusions
We provide a free and open-source program, NGmerge, that performs better than existing read merging programs. NGmerge is available on GitHub (
https://github.com/harvardinformatics/NGmerge
) under the MIT License; it is written in C and supported on Linux.
Journal Article
Inherent spatiotemporal uncertainty of renewable power in China
by
Ma, Jing
,
Song, Jie
,
Chen, Liudong
in
639/4077/2790
,
704/844/4066
,
Alternative energy sources
2023
Solar and wind resources are vital for the sustainable energy transition. Although renewable potentials have been widely assessed in existing literature, few studies have examined the statistical characteristics of the inherent renewable uncertainties arising from natural randomness, which is inevitable in stochastic-aware research and applications. Here we develop a rule-of-thumb statistical learning model for wind and solar power prediction and generate a year-long dataset of hourly prediction errors of 30 provinces in China. We reveal diversified spatiotemporal distribution patterns of prediction errors, indicating that over 60% of wind prediction errors and 50% of solar prediction errors arise from scenarios with high utilization rates. The first-order difference and peak ratio of generation series are two primary indicators explaining the uncertainty distribution. Additionally, we analyze the seasonal distributions of the provincial prediction errors that reveal a consistent law in China. Finally, policies including incentive improvements and interprovincial scheduling are suggested.
Renewable uncertainty analysis is vital for stochastic-aware research. This study generates a benchmark dataset of year-long hourly renewable prediction errors in China, and reveals the law of the spatiotemporal distribution of renewable uncertainty.
Journal Article
Qualitative data : an introduction to coding and analysis
by
Silverstein, Louise B
,
Auerbach, Carl
in
Methodology
,
PSYCHOLOGY
,
Psychology -- Research -- Methodology
2003
Qualitative Data is meant for the novice researcher who needs guidance on what specifically to do when faced with a sea of information. It takes readers through the qualitative research process, beginning with an examination of the basic philosophy of qualitative research, and ending with planning and carrying out a qualitative research study. It provides an explicit, step-by-step procedure that will take the researcher from the raw text of interview data through data analysis and theory construction to the creation of a publishable work.
The volume provides actual examples based on the authors' own work, including two published pieces in the appendix, so that readers can follow examples for each step of the process, from the project's inception to its finished product. The volume also includes an appendix explaining how to implement these data analysis procedures using NVIVO, a qualitative data analysis program.