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result(s) for
"FtsZ"
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Chloroplast Z-ring dynamics is governed by conserved core regions of evolutionarily divergent FtsZs
2025
The chloroplast FtsZ ring (Z ring) is assembled by two distinct FtsZ proteins, FtsZ2 and FtsZ1 (referred to as FtsZA and FtsZB in red algae). FtsZ2 confers stability to the Z ring, while FtsZ1 enhances its dynamics. Enhanced Z-ring dynamics is essential for Z-ring remodeling, which drives chloroplast constriction and division. However, the mechanisms underlying the distinct dynamic properties of the two FtsZs remain unclear. Here, we report that the conserved core regions are primarily responsible for the distinct dynamic properties observed in both plant and red algal FtsZs. We demonstrate that the conserved core region of FtsZ1 enhances the dynamics of FtsZ2 within coassembled filaments. Likewise, we show that the conserved core region of red algal FtsZB promotes the dynamics of coassembled FtsZA rings. Our findings provide evidence that the evolution of a second FtsZ protein represents a general mechanism to enhance the dynamics of the chloroplast Z ring.
Journal Article
Dissipative adaptation in driven self-assembly leading to self-dividing fibrils
2018
Out-of-equilibrium self-assembly of proteins such as actin and tubulin is a key regulatory process controlling cell shape, motion and division. The design of functional nanosystems based on dissipative self-assembly has proven to be remarkably difficult due to a complete lack of control over the spatial and temporal characteristics of the assembly process. Here, we show the dissipative self-assembly of FtsZ protein (a bacterial homologue of tubulin) within coacervate droplets. More specifically, we show how such barrier-free compartments govern the local availability of the energy-rich building block guanosine triphosphate, yielding highly dynamic fibrils. The increased flux of FtsZ monomers at the tips of the fibrils results in localized FtsZ assembly, elongation of the coacervate compartments, followed by division of the fibrils into two. We rationalize the directional growth and division of the fibrils using dissipative reaction–diffusion kinetics and capillary action of the filaments as main inputs. The principle presented here, in which open compartments are used to modulate the rates of dissipative self-assembly by restricting the absorption of energy from the environment, may provide a general route to dissipatively adapting nanosystems exhibiting life-like behaviour.
Journal Article
Engineering Halomonas species TD01 for enhanced polyhydroxyalkanoates synthesis via CRISPRi
by
Tao, Wei
,
Lv, Li
,
Chen, Guo-Qiang
in
2-Methylcitrate synthase
,
Applied Microbiology
,
Bacteria
2017
Background
Clustered regularly interspaced short palindromic repeats interference (CRISPRi) has provided an efficient approach for targeted gene inhibition. A non-model microorganism
Halomonas
species TD01 has been developed as a promising industrial producer of polyhydroxyalkanoates (PHA), a family of biodegradable polyesters accumulated by bacteria as a carbon and energy reserve compound. A controllable gene repression system, such as CRISPRi, is needed for
Halomonas
sp. TD01 to regulate its gene expression levels.
Results
For the first time CRISPRi was successfully used in
Halomonas
sp. TD01 to repress expression of
ftsZ
gene encoding bacterial fission ring formation protein, leading to an elongated cell morphology with typical filamentous shape similar to phenomenon observed with
Escherichia coli
. CRISPRi was employed to regulate expressions of
prpC
gene encoding 2-methylcitrate synthase for regulating 3-hydroxyvalerate monomer ratio in PHBV copolymers of 3-hydroxybutyrate (HB) and 3-hydroxyvalerate (HV). Percentages of HV in PHBV copolymers were controllable ranging from less than 1 to 13%. Furthermore, repressions on
gltA
gene encoding citrate synthase channeled more acetyl-CoA from the tricarboxylic acid (TCA) cycle to poly(3-hydroxybutyrate) (PHB) synthesis. The PHB accumulation by
Halomonas
sp. TD01 with its
gltA
gene repressed in various intensities via CRISPRi was increased by approximately 8% compared with the wild type control containing the CRISPRi vector without target.
Conclusions
It has now been confirmed that the CRISPRi system can be applied to
Halomonas
sp. TD01, a promising industrial strain for production of various PHA and chemicals under open and continuous fermentation process conditions. In details, the CRISPRi system was successfully designed in this study to target genes of
ftsZ
,
prpC
and
gltA,
achieving longer cell sizes, channeling more substrates to PHBV and PHB synthesis, respectively. CRISPRi can be expected to use for more metabolic engineering applications in non-model organisms.
Journal Article
In silico method and bioactivity evaluation to discover novel antimicrobial agents targeting FtsZ protein: Machine learning, virtual screening and antibacterial mechanism study
by
Tu, Yuanbiao
,
Wang, Linxiao
,
Lan, Feixiang
in
Animals
,
Anti-Bacterial Agents - chemistry
,
Anti-Bacterial Agents - pharmacology
2025
This research paper utilizes a fused-in-silico approach alongside bioactivity evaluation to identify active FtsZ inhibitors for drug discovery. Initially, ROC-guided machine learning was employed to obtain almost 13182 compounds from three libraries. After conducting virtual screening to assess the affinity of 2621 acquired compounds, cluster analysis and bonding model analysis led to the discovery of five hit compounds. Additionally, antibacterial activity assays and time-killing kinetics revealed that
T3995
could eliminate
Staphylococcus aureus
ATCC6538 and
Bacillus subtilis
ATCC9732, with MIC values of 32 and 2 μg/mL. Further morphology and FtsZ polymerization assays indicated that
T3995
could be an antimicrobial inhibitor by targeting FtsZ protein. Moreover, hemolytic toxicity evaluation demonstrated that
T3995
is safe at or below 16 ug/mL concentration. Additionally, bonding model analysis explained how the compound
T3995
can display antimicrobial activity by targeting the FtsZ protein. In conclusion, this study presents a promising FtsZ inhibitor that was discovered through a fused computer method and bioactivity evaluation.
Graphical Abstract
Journal Article
ZapC crosslinks FtsZ filaments through a dual-binding mechanism modulated by the intrinsically disordered linker of FtsZ in Escherichia coli
by
Zhan, Rui
,
Li, Ying
,
Lutkenhaus, Joe
in
Amino acids
,
Bacterial Cell Division
,
Bacterial Growth
2025
Bacterial cytokinesis requires the Z-ring, a highly dynamic cytoskeletal element consisting of polymers of the bacterial tubulin FtsZ. Formation of a coherent and functional Z-ring is facilitated by FtsZ-associated proteins (Zaps), which can crosslink FtsZ polymers, but how these proteins work is still incompletely understood. In this study, we find that ZapC, one of the FtsZ crosslinkers, binds to both FtsZ’s globular domain and its conserved C-terminal peptide (CTP) to crosslink FtsZ filaments. Moreover, the intrinsically disordered C-terminal linker (CTL) of FtsZ modulates its binding to ZapC and many other FtsZ binding proteins. These findings reveal a novel mechanism to crosslink FtsZ filaments and an important and highly conserved role of the CTL in FtsZ functionality.
Journal Article
Mycobacterial FtsZ and inhibitors: a promising target for the anti-tubercular drug development
2024
The emergence of multidrug-resistant tuberculosis (MDR-TB) strains has rendered many anti-TB drugs ineffective. Consequently, there is an urgent need to identify new drug targets against Mycobacterium tuberculosis (Mtb). Filament Forming Temperature Sensitive Gene Z (FtsZ), a member of the cytoskeletal protein family, plays a vital role in cell division by forming a cytokinetic ring at the cell's center and coordinating the division machinery. When FtsZ is depleted, cells are unable to divide and instead elongate into filamentous structures that eventually undergo lysis. Since the inactivation of FtsZ or alterations in its assembly impede the formation of the Z-ring and septum, FtsZ shows promise as a target for the development of anti-mycobacterial drugs. This review not only discusses the potential role of FtsZ as a promising pharmacological target for anti-tuberculosis therapies but also explores the structural and functional aspects of the mycobacterial protein FtsZ in cell division. Additionally, it reviews various inhibitors of Mtb FtsZ. By understanding the importance of FtsZ in cell division, researchers can explore strategies to disrupt its function, impeding the growth and proliferation of Mtb. Furthermore, the investigation of different inhibitors that target Mtb FtsZ expands the potential for developing effective treatments against tuberculosis.
Journal Article
Molecular mechanism by which the nucleoid occlusion factor, SlmA, keeps cytokinesis in check
by
Lu, Yue
,
Margolin, William
,
Tonthat, Nam Ky
in
bacterial cell division
,
Bacterial Proteins - chemistry
,
Bacterial Proteins - metabolism
2011
In
Escherichia coli
, cytokinesis is orchestrated by FtsZ, which forms a Z‐ring to drive septation. Spatial and temporal control of Z‐ring formation is achieved by the Min and nucleoid occlusion (NO) systems. Unlike the well‐studied Min system, less is known about the anti‐DNA guillotining NO process. Here, we describe studies addressing the molecular mechanism of SlmA (synthetic lethal with a defective Min system)‐mediated NO. SlmA contains a TetR‐like DNA‐binding fold, and chromatin immunoprecipitation analyses show that SlmA‐binding sites are dispersed on the chromosome except the Ter region, which segregates immediately before septation. SlmA binds DNA and FtsZ simultaneously, and the SlmA–FtsZ structure reveals that two FtsZ molecules sandwich a SlmA dimer. In this complex, FtsZ can still bind GTP and form protofilaments, but the separated protofilaments are forced into an anti‐parallel arrangement. This suggests that SlmA may alter FtsZ polymer assembly. Indeed, electron microscopy data, showing that SlmA–DNA disrupts the formation of normal FtsZ polymers and induces distinct spiral structures, supports this. Thus, the combined data reveal how SlmA derails Z‐ring formation at the correct place and time to effect NO.
Nucleoid occlusion (NO) restricts bacterial cell division to prevent chromosome guillotining in the cell midzone when replication or segregation is delayed. Structural work suggests that the NO factor SlmA (synthetic lethal with a defective Min system) interferes with formation of the cytokinetic Z‐ring by altering associations between FtsZ protofilaments.
Journal Article
Defining the rate-limiting processes of bacterial cytokinesis
by
Xiao, Jie
,
Plumer, Trevor M.
,
Coltharp, Carla
in
Bacterial Proteins - genetics
,
Bacterial Proteins - metabolism
,
Bacteriology
2016
Bacterial cytokinesis is accomplished by the essential ‘divisome’ machinery. The most widely conserved divisome component, FtsZ, is a tubulin homolog that polymerizes into the ‘FtsZ-ring’ (‘Z-ring’). Previous in vitro studies suggest that Z-ring contraction serves as a major constrictive force generator to limit the progression of cytokinesis. Here, we applied quantitative superresolution imaging to examine whether and how Z-ring contraction limits the rate of septum closure during cytokinesis in Escherichia coli cells. Surprisingly, septum closure rate was robust to substantial changes in all Z-ring properties proposed to be coupled to force generation: FtsZ’s GTPase activity, Z-ring density, and the timing of Z-ring assembly and disassembly. Instead, the rate was limited by the activity of an essential cell wall synthesis enzyme and further modulated by a physical divisome–chromosome coupling. These results challenge a Z-ring–centric view of bacterial cytokinesis and identify cell wall synthesis and chromosome segregation as limiting processes of cytokinesis.
Journal Article
The E. coli MinCDE system in the regulation of protein patterns and gradients
by
Heermann, Tamara
,
Schwille, Petra
,
Ramm, Beatrice
in
Adenosine triphosphatase
,
Boundaries
,
Cellular communication
2019
Molecular self-organziation, also regarded as pattern formation, is crucial for the correct distribution of cellular content. The processes leading to spatiotemporal patterns often involve a multitude of molecules interacting in complex networks, so that only very few cellular pattern-forming systems can be regarded as well understood. Due to its compositional simplicity, the Escherichia coli MinCDE system has, thus, become a paradigm for protein pattern formation. This biological reaction diffusion system spatiotemporally positions the division machinery in E. coli and is closely related to ParA-type ATPases involved in most aspects of spatiotemporal organization in bacteria. The ATPase MinD and the ATPase-activating protein MinE self-organize on the membrane as a reaction matrix. In vivo, these two proteins typically oscillate from pole-to-pole, while in vitro they can form a variety of distinct patterns. MinC is a passenger protein supposedly operating as a downstream cue of the system, coupling it to the division machinery. The MinCDE system has helped to extract not only the principles underlying intracellular patterns, but also how they are shaped by cellular boundaries. Moreover, it serves as a model to investigate how patterns can confer information through specific and non-specific interactions with other molecules. Here, we review how the three Min proteins self-organize to form patterns, their response to geometric boundaries, and how these patterns can in turn induce patterns of other molecules, focusing primarily on experimental approaches and developments.
Journal Article