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20,188 result(s) for "Functional data"
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Multivariate Functional Principal Component Analysis for Data Observed on Different (Dimensional) Domains
Existing approaches for multivariate functional principal component analysis are restricted to data on the same one-dimensional interval. The presented approach focuses on multivariate functional data on different domains that may differ in dimension, such as functions and images. The theoretical basis for multivariate functional principal component analysis is given in terms of a Karhunen-Loève Theorem. For the practically relevant case of a finite Karhunen-Loève representation, a relationship between univariate and multivariate functional principal component analysis is established. This offers an estimation strategy to calculate multivariate functional principal components and scores based on their univariate counterparts. For the resulting estimators, asymptotic results are derived. The approach can be extended to finite univariate expansions in general, not necessarily orthonormal bases. It is also applicable for sparse functional data or data with measurement error. A flexible R implementation is available on CRAN. The new method is shown to be competitive to existing approaches for data observed on a common one-dimensional domain. The motivating application is a neuroimaging study, where the goal is to explore how longitudinal trajectories of a neuropsychological test score covary with FDG-PET brain scans at baseline. Supplementary material, including detailed proofs, additional simulation results, and software is available online.
Registration for Exponential Family Functional Data
We introduce a novel method for separating amplitude and phase variability in exponential family functional data. Our method alternates between two steps: the first uses generalized functional principal components analysis to calculate template functions, and the second estimates smooth warping functions that map observed curves to templates. Existing approaches to registration have primarily focused on continuous functional observations, and the few approaches for discrete functional data require a pre-smoothing step; these methods are frequently computationally intensive. In contrast, we focus on the likelihood of the observed data and avoid the need for preprocessing, and we implement both steps of our algorithm in a computationally efficient way. Our motivation comes from the Baltimore Longitudinal Study on Aging, in which accelerometer data provides valuable insights into the timing of sedentary behavior. We analyze binary functional data with observations each minute over 24 hours for 592 participants, where values represent activity and inactivity. Diurnal patterns of activity are obscured due to misalignment in the original data but are clear after curves are aligned. Simulations designed to mimic the application indicate that the proposed methods outperform competing approaches in terms of estimation accuracy and computational efficiency. Code for our method and simulations is publicly available.
Locally Sparse Estimator for Functional Linear Regression Models
A new locally sparse (i.e., zero on some subregions) estimator for coefficient functions in functional linear regression models is developed based on a novel functional regularization technique called \"fSCAD.\" The nice shrinkage property of fSCAD allows the proposed estimator to locate null subregions of coefficient functions without over shrinking nonzero values of coefficient functions. Additionally, a roughness penalty is incorporated to control the roughness of the locally sparse estimator. Our method is theoretically sounder and computationally simpler than existing methods. Asymptotic analysis reveals that the proposed estimator is consistent and can identify null subregions with probability tending to one. Extensive simulations confirm the theoretical analysis and show excellent numerical performance of the proposed method. Practical merit of locally sparse modeling is demonstrated by two real applications. Supplemental materials for the article are available online.
When are they coming? Understanding and forecasting the timeline of arrivals at the FC Barcelona stadium on match days
Futbol Club Barcelona operates the largest stadium in Europe (with a seating capacity of almost one hundred thousand people) and manages recurring sports events. These are influenced by multiple conditions (time and day of the week, weather, adversary) and affect city dynamics—e.g., peak demand for related services like public transport and stores. We study fine grain audience entrances at the stadium segregated by visitor type and gate to gain insights and predict the arrival behavior of future games, with a direct impact on the organizational performance and productivity of the business. We can forecast the timeline of arrivals at gate level 72 h prior to kickoff, facilitating operational and organizational decision-making by anticipating potential agglomerations and audience behavior. Furthermore, we can identify patterns for different types of visitors and understand how relevant factors affect them. These findings directly impact commercial and business interests and can alter operational logistics, venue management, and safety.
Comments on: exploratory functional data analysis
The paper “Exploratory Functional Data Analysis” provides a comprehensive review of recent exploratory approaches for functional data, highlighting the challenges posed by the high dimensionality and complexity of these data objects. Here, we further comment on challenging aspects for the exploratory analysis of these data, which present opportunities for future research.
Functional CAR Models for Large Spatially Correlated Functional Datasets
We develop a functional conditional autoregressive (CAR) model for spatially correlated data for which functions are collected on areal units of a lattice. Our model performs functional response regression while accounting for spatial correlations with potentially nonseparable and nonstationary covariance structure, in both the space and functional domains. We show theoretically that our construction leads to a CAR model at each functional location, with spatial covariance parameters varying and borrowing strength across the functional domain. Using basis transformation strategies, the nonseparable spatial-functional model is computationally scalable to enormous functional datasets, generalizable to different basis functions, and can be used on functions defined on higher dimensional domains such as images. Through simulation studies, we demonstrate that accounting for the spatial correlation in our modeling leads to improved functional regression performance. Applied to a high-throughput spatially correlated copy number dataset, the model identifies genetic markers not identified by comparable methods that ignore spatial correlations. Supplementary materials for this article are available online.
Scalar Variance and Scalar Correlation for Functional Data
In Functional Data Analysis (FDA), the existing summary statistics so far are elements in the Hilbert space L2 of square-integrable functions. These elements do not constitute an ordered set; therefore, they are not sufficient to solve problems related to comparability such as obtaining a correlation measurement or comparing the variability between two sets of curves, determining the efficiency and consistency of a functional estimator, among other things. Consequently, we present an approach of coherent redefinition of some common summary statistics such as sample variance, sample covariance and correlation in Functional Data Analysis (FDA). Regarding variance, covariance and correlation between functional data, our summary statistics lead to numbers instead of functions which is helpful for solving the aforementioned problems. Furthermore, we briefly discuss the functional forms coherence of some statistics already present in the FDA. We formally enumerate and demonstrate some properties of our functional summary statistics. Then, a simulation study is presented briefly, with evidence of the consistency of the proposed variance. Finally, we present the implementation of our statistics through two application examples.
Daily activity profiles over the lifespan of female medflies as biomarkers of aging and longevity
The relationship between the early‐age activity of Mediterranean fruit flies (medflies) or other fruit flies and their lifespan has not been much studied, in contrast to the connections between lifespan and diet, sexual signaling, and reproduction. The objective of this study is to assess intra‐day and day‐to‐day activity profiles of female Mediterranean fruit flies and their role as biomarker of longevity as well as to explore the relationships between these activity profiles, diet, and age‐at‐death throughout the lifespan. We use advanced statistical methods from functional data analysis (FDA). Three distinct patterns of activity variations in early‐age activity profiles can be distinguished. A low‐caloric diet is associated with a delayed activity peak, while a high‐caloric diet is linked with an earlier activity peak. We find that age‐at‐death of individual medflies is connected to their activity profiles in early life. An increased risk of mortality is associated with increased activity in early age, as well as with a higher contrast between daytime and nighttime activity. Conversely, medflies are more likely to have a longer lifespan when they are fed a medium‐caloric diet and when their daily activity is more evenly distributed across the early‐age span and between daytime and nighttime. The before‐death activity profile of medflies displays two characteristic before‐death patterns, where one pattern is characterized by slowly declining daily activity and the other by a sudden decline in activity that is followed by death. The objective of this study is to assess intraday and day‐to‐day activity profiles of female medflies and their role as a biomarker of longevity as well as to explore the relationship between these activity profiles, diet, and age‐at‐death. The result shows that an increased risk of mortality is associated with increased activity in early age, as well as with a higher contrast between daytime and nighttime activity.
Bayesian Semiparametric Functional Mixed Models for Serially Correlated Functional Data, With Application to Glaucoma Data
Glaucoma, a leading cause of blindness, is characterized by optic nerve damage related to intraocular pressure (IOP), but its full etiology is unknown. Researchers at UAB have devised a custom device to measure scleral strain continuously around the eye under fixed levels of IOP, which here is used to assess how strain varies around the posterior pole, with IOP, and across glaucoma risk factors such as age. The hypothesis is that scleral strain decreases with age, which could alter biomechanics of the optic nerve head and cause damage that could eventually lead to glaucoma. To evaluate this hypothesis, we adapted Bayesian Functional Mixed Models to model these complex data consisting of correlated functions on spherical scleral surface, with nonparametric age effects allowed to vary in magnitude and smoothness across the scleral surface, multi-level random effect functions to capture within-subject correlation, and functional growth curve terms to capture serial correlation across IOPs that can vary around the scleral surface. Our method yields fully Bayesian inference on the scleral surface or any aggregation or transformation thereof, and reveals interesting insights into the biomechanical etiology of glaucoma. The general modeling framework described is very flexible and applicable to many complex, high-dimensional functional data. Supplementary materials for this article are available online.
Non-Parametric Conditional U-Processes for Locally Stationary Functional Random Fields under Stochastic Sampling Design
Stute presented the so-called conditional U-statistics generalizing the Nadaraya–Watson estimates of the regression function. Stute demonstrated their pointwise consistency and the asymptotic normality. In this paper, we extend the results to a more abstract setting. We develop an asymptotic theory of conditional U-statistics for locally stationary random fields Xs,An:sinRn observed at irregularly spaced locations in Rn=[0,An]d as a subset of Rd. We employ a stochastic sampling scheme that may create irregularly spaced sampling sites in a flexible manner and includes both pure and mixed increasing domain frameworks. We specifically examine the rate of the strong uniform convergence and the weak convergence of conditional U-processes when the explicative variable is functional. We examine the weak convergence where the class of functions is either bounded or unbounded and satisfies specific moment conditions. These results are achieved under somewhat general structural conditions pertaining to the classes of functions and the underlying models. The theoretical results developed in this paper are (or will be) essential building blocks for several future breakthroughs in functional data analysis.