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Heavy metals in surface and groundwater were analysed and their sources were identified using multivariate statistical tools for two towns in South Africa. Human exposure risk through the drinking water pathway was also assessed. Electrical conductivity values showed that groundwater is desirable to permissible for drinking except for six locations. Concentration of aluminium, lead and nickel were above the permissible limit for drinking at all locations. Boron, cadmium, iron and manganese exceeded the limit at few locations. Heavy metal pollution index based on ten heavy metals indicated that 85% of the area had good quality water, but 15% was unsuitable. Human exposure dose through the drinking water pathway indicated no risk due to boron, nickel and zinc, moderate risk due to cadmium and lithium and high risk due to silver, copper, manganese and lead. Hazard quotients were high in all sampling locations for humans of all age groups, indicating that groundwater is unsuitable for drinking purposes. Highly polluted areas were located near the coast, close to industrial operations and at a landfill site representing human-induced pollution. Factor analysis identified the four major pollution sources as: (1) industries; (2) mining and related activities; (3) mixed sources- geogenic and anthropogenic and (4) fertilizer application.

Savannas cover one-fifth of the Earth’s surface, harbour substantial biodiversity, and provide a broad range of ecosystem services to hundreds of millions of people. The community composition of trees in tropical moist forests varies with climate, but whether the same processes structure communities in disturbance-driven savannas remains relatively unknown. We investigate how biodiversity is structured over large environmental and disturbance gradients in woodlands of eastern and southern Africa. We use tree inventory data from the Socio-Ecological Observatory for Studying African Woodlands (SEOSAW) network, covering 755 ha in a total of 6780 plots across nine countries of eastern and southern Africa, to investigate how alpha, beta, and phylogenetic diversity varies across environmental and disturbance gradients. We find strong climate-richness patterns, with precipitation playing a primary role in determining patterns of tree richness and high turnover across these savannas. Savannas with greater rainfall contain more tree species, suggesting that low water availability places distributional limits on species, creating the observed climate-richness patterns. Both fire and herbivory have minimal effects on tree diversity, despite their role in determining savanna distribution and structure. High turnover of tree species, genera, and families is similar to turnover in seasonally dry tropical forests of the Americas, suggesting this is a feature of semiarid tree floras. The greater richness and phylogenetic diversity of wetter plots shows that broad-scale ecological patterns apply to disturbance-driven savanna systems. High taxonomic turnover suggests that savannas from across the regional rainfall gradient should be protected if we are to maximise the conservation of unique tree communities.

Deep marine subsurface sediments represent a novel archaeal biosphere with unknown physiology; the sedimentary subsurface harbors numerous novel phylogenetic lineages of archaea that are at present uncultured. Archaeal 16S rRNA analyses of deep subsurface sediments demonstrate their global occurrence and wide habitat range, including deep subsurface sediments, methane seeps and organic-rich coastal sediments. These subsurface archaeal lineages were discovered by PCR of extracted environmental DNA; their detection ultimately depends on the specificity of the archaeal PCR 16S rRNA primers. Surprisingly high mismatch frequencies for some archaeal PCR primers result in amplification bias against the corresponding archaeal lineages; this review presents some examples. Obviously, most archaeal 16S rRNA PCR primers were developed either before the discovery of these deep subsurface archaeal lineages, or without taking their sequence variants into account. PCR surveys with multiple primer combinations, revision and updates of primers whenever possible, and increasing use of PCR-independent methods in molecular microbial ecology will contribute to a more comprehensive view of subsurface archaeal communities.

The southern coast of Africa is one of the few places in the world where water temperatures are predicted to cool in the future. This endemism-rich coastline is home to two sister species of kelps of the genus Ecklonia maxima and Ecklonia radiata , each associated with specific thermal niches, and occuring primarily on opposite sides of the southern tip of Africa. Historical distribution records indicate that E. maxima has recently shifted its distribution ~ 70 km eastward, to sites where only E. radiata was previously reported. The contact of sister species with contrasting thermal affinities and the occurrence of mixed morphologies raised the hypothesis that hybridization might be occurring in this contact zone. Here we describe the genetic structure of the genus Ecklonia along the southern coast of Africa and investigate potential hybridization and cryptic diversity using a combination of nuclear microsatellites and mitochondrial markers. We found that both species have geographically discrete genetic clusters, consistent with expected phylogeographic breaks along this coastline. In addition, depth-isolated populations were found to harbor unique genetic diversity, including a third Ecklonia lineage. Mito-nuclear discordance and high genetic divergence in the contact zones suggest multiple hybridization events between Ecklonia species. Discordance between morphological and molecular identification suggests the potential influence of abiotic factors leading to convergent phenotypes in the contact zones. Our results highlight an example of cryptic diversity and hybridization driven by contact between two closely related keystone species with contrasting thermal affinities.

he tsunami induced by the May 21, 2003, Algerian Boumerde`s-Zemmouri earthquake (moment magnitude Mw=6.9) propagated across the western Mediterranean Basin, thereby causing material damages in some harbors and coastal areas. This was the case in the Balearic Islands and particularly the Palma harbor. Attempts to simulate the 2003 tsunami event found discrepancies between tsunami arrival times and wave amplitude when comparing tide gauge records with results from numerical models. To date, all published model results of the amplitude of the tsunami are underestimations, attributed to numerical limitations due to the lack of high-resolution bathymetry and poor definition of harbor geometry. Other views suggest the nappropriateness of the available seismic source parameterizations and the possible occurrence of submarine landsliding triggered by the earthquake that has not been included in the numerical simulations. In this article we present the results of a numerical study aimed at better understanding the response of the interacting Palma bay and harbor under the impact of the 2003 western Mediterranean tsunami. The transference of the tsunami energy from the generation area to the continental shelf, the bay, and the harbor has been studied and compared with the natural oscillation modes of the bay and harbor water bodies. Our work includes a sensitivity analysis of the source parameterization and the bathymetry grid size for the bay and harbor as a way to explain the discrepancies between simulations and observations. The Palma harbor tide gauge shows that energy from the tsunami concentrated mainly in periods that fitted to the natural modes of oscillations of the bay. Therefore, the significant wave amplification observed inside the harbor, mainly in its northern basin, was generated by a resonance effect induced by Palma bay. The improvement of the bathymetry grid resolution in the bay and harbor domains and the inclusion in the simulations of the exact harbor geometry and internal configuration result in a slight wave-high increment that is much below the wave height recorded in the tide gauge. Our results strongly point to a necessary revision of the tsunami seismic source parameters.

Determining the physiological tolerance ranges of species is necessary to comprehend the limits of their responsiveness under strong abiotic pressures. For this purpose, the cosmopolitan moss Ceratodon purpureus (Hedw.) Brid. is a good model due to its wide geographical distribution throughout different biomes and habitats. In order to disentangle how this species copes with stresses such as extreme temperatures and high radiation, we designed a meta-analysis by including the main photosynthetic traits obtained by gas exchange measurements in three contrasting habitats from the Southern Hemisphere. Our findings highlight that traits such as respiration homeostasis, modulation of the photosynthetic efficiency, adjustment of the optimal temperature, and switching between shade and sun-adapted forms, which are crucial in determining the responsiveness of this species. In fact, these ecophysiological traits are in concordance with the climatic particularities of each habitat. Furthermore, the photosynthetic trends found in our study point out how different Livingston Island (Maritime Antarctica) and Granite Harbour (Continental Antarctica) are for plant life, while the population from the Succulent Karoo Desert (South Africa) shares traits with both Antarctic regions. Altogether, the study highlights the high resilience of C. purpureus under abrupt climate changes and opens new perspectives about the wide spectrum of physiological responses of cryptogams to cope with climate change scenarios.

The uMhlatuzana, uMbilo and aManzimnyama river catchments located on the eastern seaboard of the KwaZulu-Natal province, South Africa, form the core of urbanization and industrialization, contributing the only natural freshwater inflows to the Bayhead Canal portion of the Durban Harbour. In this study, seasonal discharges and physico–chemical water properties were used to quantitatively determine the material mass transport capacity of the river systems on the basis of hydrographic inputs and chemical loading from the surrounding land use sectors. The mass transport of the total dissolved solids (TDS), ammonia (NH 4 ), phosphorous (P), aluminum (Al), calcium (Ca), copper (Cu), chromium (Cr), mercury (Hg), potassium (K), magnesium (Mg), sodium (Na), nickel (Ni), lead (Pb), sulphur (S) and vanadium (V) was determined for each river. Results indicated that land use, seasonality and river flow were significant determinants for the material loading in the rivers and the receiving port waters. The spatio-temporal distribution patterns of chemical fluxes indicated that industrial activity associated with the aManzimnyama canal contributed the most, with regards to TDS, NH 4 , Ca, K, Mg, Na, S and V, loading in both wet and dry seasons, as well as Al, Cu, Hg and Pb during the dry season. Similarly, industrial activity associated with the uMbilo/uMhlatuzana Canal at the lower reaches accounted for the highest P, Al, Cu and Pb fluxes in the wet season alone. Fluxes of these parameters are used to explain the observed elemental concentrations and patterns of the receiving port waters of the Bayhead Canal.

Lepidium sensu stricto (s.s.) (Brassicaceae) (ca. 150 species) is distributed worldwide with endemic species on every continent. It is represented in Australia and New Zealand by 19 and seven native species, respectively. In the present study we used a nuclear ribosomal internal transcribed spacer (ITS) phylogeny in comparison with a cpDNA phylogeny to unravel the origin of Australian/New Zealand species. Although phylogenetic relationships within Lepidium s.s. were not fully resolved, the cpDNA data were in agreement with a Californian origin of Lepidium species from Australia/New Zealand. Strongly conflicting signals between the cp- and nuclear DNA phylogenetic analysis clearly indicated hybridogenous genomic constitution of Australian Lepidium s.s. species: All 18 studied Australian/New Zealand Lepidium s.s. species examined shared a Californian cpDNA type. While eleven Australian/New Zealand species appeared to harbor a Californian ITS type, a group of seven species shared a South African ITS type. This pattern is most likely explained by two trans-oceanic dispersals of Lepidium from California and Africa to Australia/New Zealand and subsequent hybridization followed by homogenization of the ribosomal DNA either to the Californian or South African ITS type in the two different lineages. Calibration of our molecular trees indicates a Pliocene/Pleistocene origin of Lepidium in Australia/New Zealand. Low levels of cpDNA and ITS sequence divergence and unresolved topologies within Australian/New Zealand species suggest a rapid and recent radiation of Lepidium after the hybridization event. This coincides with dramatic climatic changes in that geological epoch shaping the composition of the vegetation.

On 21 May 2003 a submarine earthquake occurred near Algiers producing a tsunami that propagated northward and reached the Balearic Islands and the Levantine coast of the Iberian Peninsula within an hour. Despite that the generated tsunami was moderate, sea level variations inside certain harbors at the Balearic Islands were significant, producing severe damage to moored boats. Available tsunami records in the affected harbors are examined to estimate amplifications factors of arriving waves and spectral characteristics of the source. Comparison between background and tsunami oscillations at various sites allowed separation of the tsunami source properties from local topographic effects. The fundamental period of the reconstructed source spectrum is 21 min, which is in close agreement with that found by Alasset et al. (2006) based on modeling the tsunami initiation.

A method, using microporous membrane liquid-liquid extraction technique (MMLLE) and gas chromatography with an electron capture detector (GC-ECD) and gas chromatograph coupled to a mass spectrometer, was developed for the analysis of cyclic organochlorine pesticides (OCPs) and polychlorinated biphenyls (PCBs) in sediment slurry. The MMLLE extraction employed isooctane as the organic liquid that was immobilised in the hollow fibre pores and in the lumen, at optimal sample pH value of 2.0 for OCPs and 7 for PCBs. The effect of triton x-100, in enhancing the dissolution of the compounds from sediment, was found to be optimal at a value of 0.15%, while the ionic strength was optimal at a value of 0.01 M. Samples from coastlines along the Indian Ocean in the southern parts of South Africa were found to be contaminated with cis and trans chlordane at concentrations of up to 0.003 mg/kg, while samples from northern parts were contaminated with 2,2',4',4-tetrachloro-1,1'biphenyl at concentrations of up to 0.02 mg/kg.