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"Hardiness"
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Overexpression of the ICaragana korshinskii com58276/I Gene Enhances Tolerance to Drought in Cotton
The increasing water scarcity associated with environmental change brings significant negative impacts to the growth of cotton plants, whereby it is urgent to enhance plant tolerance to drought. Here, we overexpressed the com58276 gene isolated from the desert plant Caragana korshinskii in cotton plants. We obtained three OE plants and demonstrated that com58276 confers drought tolerance in cotton after subjecting transgenic seeds and plants to drought. RNA-seq revealed the mechanisms of the possible anti-stress response, and that the overexpression of com58276 does not affect growth and fiber content in OE cotton plants. The function of com58276 is conserved across species, improving the tolerance of cotton to salt and low temperature, and demonstrating its applicability to improve plant resistance to environmental change.
Journal Article
Moringa leaf extract improves biochemical attributes, yield and grain quality of rice
Changing climate, food shortage, water scarcity and rapidly increasing population are some of the emerging challenges globally. Drought stress is the most devastating threat for agricultural productivity. Natural plant growth substances are intensively used to improve the productivity of crop plants grown under stressed and benign environments. The current study evaluated whether leaf extract of different moringa (Moringa oleifera L.) could play a role in improving drought-tolerance of rice (Oryza sativa L.). Rice plants were grown under three drought conditions, i.e., no, moderate and severe drought (100, 75 and 50% field capacity, respectively). Moringa leaf extract (MLE) obtained from four landraces (Multan, Faisalabad, D. G. Khan and exotic landrace from India) was applied during critical crop growth stages, i.e., tillering, panicle initiation and grain filling. Drought stress adversely affected the gas exchange attributes, photosynthetic pigments, antioxidant enzymes' activities, yield and quality parameters of rice. Application of MLE from all landraces significantly improved physiological, biochemical and yield parameters under stressed and normal environmental conditions. The highest improvement in gas exchange traits (photosynthetic rate, stomatal conductance and respiration rate), photosynthetic pigments (chlorophyll a, b and carotenoids) and enzymatic activities (superoxide dismutase, catalase) and oxidative marker (H.sub.2 O.sub.2) was recorded with MLE obtained from Faisalabad landrace. The application of MLE of Faisalabad landrace also improved yield and grain quality of rice grown under drought stress as well as drought-free environment. Thus, MLE of Faisalabad can be successfully used to improve growth, productivity and grain quality of rice under drought stress.
Journal Article
Integrative metabolomics and transcriptomics profiling reveals differential expression of flavonoid synthesis in Ophiopogon japonicus
Drought is one of the consequences of climate change that severely affects plant growth and development. Ophiopogon japonicus (L. f.) Ker-Gawl. (Chinese name: Chuanmaidong, abbreviated as CMD) is a commonly used herbaceous plant whose growth and development are strongly affected by drought. Here, we comprehensively analyzed the transcriptomic and metabolic responses of two CMD varieties (EP and CP) to drought stress. CP utilized a small number of differentially expressed genes to regulate a greater number of differential metabolites compared to EP, suggesting that it may be more drought tolerant. In addition, integrated transcriptome and metabolome analyses revealed that transcription factors such as WRKY, TIFY, and C2H2 regulate flavonoid synthesis in CMD. These findings provide ideas for in-depth analysis of the mechanism of CMD against drought stress, and provide a theoretical basis for breeding high-quality drought-tolerant varieties.
Journal Article
Genome-wide identification of the ATP-dependent zinc metalloprotease
The ATP-dependent zinc metalloprotease (FtsH) protein gene family is essential for plant growth, development, and stress responses. Although FtsH genes have been identified in various plant species, the FtsH gene family in wheat (Triticum aestivum) remains unstudied. In this study, we identified 11 TaFtsH genes with uneven chromosomal distribution, significant variations in gene sequence length, and differing intron numbers among individual members. Additionally, these proteins exhibit similar physicochemical characteristics as well as secondary and tertiary structures. The FtsH genes can be classified into eight groups, each characterized by similar structures and conserved motifs. Intraspecific and interspecific comparisons further revealed extensive gene duplications within the TaFtsH gene family, indicating a closer relationship to maize. Analysis of cis-acting elements in the promoter regions of TaFtsH genes revealed developmental and stress-responsive elements in most of the genes. Expression pattern analysis showed that TaFtsH genes are expressed in all wheat tissues, though with varying patterns. TaFtsH genes displayed differential responses to CdCl.sub.2, ZnSO.sub.4, and MnSO.sub.4 stress treatments. Gene Ontology (GO) enrichment analysis indicated that TaFtsH genes are involved in protein hydrolysis. Barley stripe mosaic virus-induced gene silencing (BSMV-VIGS) technology confirmed the function of TaFtsH-1, indicating that silencing TaFtsH-1 enhances common wheat's resistance to cadmium (Cd) toxicity. In summary, this study offers an in-depth understanding of the FtsH gene family in wheat, establishing a solid basis for comprehending its functions, genetic mechanisms, and improving wheat's tolerance to heavy metal contamination.
Journal Article
Analyzing cold hardiness
In this study, we conducted a low-temperature exothermic (LTE) investigation on 1-year-old (1a) branches of sixteen peach cultivars through a differential thermal analysis (DTA) procedure. We used a three-point approach to determine the lethal injury temperature (LT-I) of the xylem, the LTE correlation indexes, and the subordinate function value method were applied to compare cold hardiness of sixteen peach varieties. The results showed that the slope of the LT-I for the xylem of sixteen peach cultivars was different, and the LTE indexes were significantly different. Among all the studied varieties, the cold hardiness was strongest in Donghe No.1, followed by Wangjiazhuangmaotao No.2 and Hunchun. Qiuyan and Yanhong are second, and belong to the cold-resistant type; Qiuyi, Okubo, Zhongnongjinhui, and Chunmei, exhibited medium cold hardiness. Zhongtaohongyu, Spring snow, Yufei, and Zhongyou No.8 varieties exhibited low hardiness; while the 21st century, Golden Honey No. 1 and Zhonghuashoutao have the worst cold hardiness and are the weakest cold-hardiness types. In addition, the injury degrees of xylem from LT-I analysis were significantly related to the browning rates (BR) and electrolytic leakage (EI) from traditional low temperature freezing analysis. It is demonstrated that the LTE analysis is a simple, accurate, and practical method for identifying the cold hardiness of 1a branches of peach.
Journal Article
Identification of PP2C gene family and its role in stress and adversity based on T2T flax
The PP2C gene family plays crucial roles in plant growth, development, and responses to biotic/abiotic stresses. Flax (Linum usitatissimum L.), as an important oilseed and fiber crop, lacks comprehensive characterization of its PP2C genes. In this study, we conducted a genome-wide bioinformatics analysis of the PP2C gene family in flax using the Telomere to Telomere (T2T) genome assembly, identifying 117 LuPP2C genes. Phylogenetic analysis classified these LuPP2C proteins into 11 distinct subclades. Gene structure and motif analyses revealed conserved exon-intron architectures and motif compositions among members within the same phylogenetic branches. Cis-regulatory element analysis of LuPP2C promoters identified abundant stress-responsive elements, including those associated with plant hormones (MeJA and ABA) and abiotic stresses (anaerobic induction, drought responsiveness, and low-temperature adaptation). Genomic duplication events revealed 104 segmental duplication pairs, suggesting expansion through large-scale duplication. miRNA target prediction identified lus-miR395 as the predominant miRNA targeting LuPP2C family members. Expression profiling demonstrated preferential expression of most LuPP2C members in leaf tissues. Quantitative real-time PCR (qRT-PCR) analysis further revealed that subfamily A genes, particularly LuPP2C26 and LuPP2C99, were significantly upregulated under cold, drought, and salt stress conditions. Functional validation through heterologous expression confirmed that overexpression of LuPP2C26 and LuPP2C99 enhances salt tolerance in yeast transformants. These findings systematically characterize the flax PP2C family and provide insights into its potential roles in stress adaptation mechanisms.
Journal Article
IFestuca coelestis/I Increases Drought Tolerance and Nitrogen Use via Nutrient Supply–Demand Relationship on the Qinghai-Tibet Plateau
Drought and nutrient deficiency pose great challenges to the successful establishment of native plants on the Qinghai-Tibet Plateau. The dominant factors and strategies that affect the adaptation of alpine herbs to dry and nutrient-deficient environments remain unclear. Three water gradients were established using two-factor controlled experiments: low water (W[sub.L] ), medium water (W[sub.M] ), and high water (W[sub.H] ). The field water-holding capacities were 35%, 55%, and 75%, respectively. Nitrogen fertilizer (N) was applied at four levels: control (CK), low (F[sub.L] ), medium (F[sub.M] ), and high (F[sub.H] ) at 0, 110, 330, and 540 mg/kg, respectively. The results revealed that N was the main limiting factor, rather than phosphorous (P), in Festuca coelestis under drought stress. Under water shortage conditions, F. coelestis accumulated more proline and non-structural carbohydrates, especially in the aboveground parts of the leaves and stems; however, the root diameter and aboveground nitrogen use efficiency were reduced. Appropriate N addition could mitigate the adverse effects by increasing the release of N, P, and enzyme activity in the bulk soil and rhizosphere to balance their ratio, and was mainly transferred to the aboveground parts, which optimized the supply uptake relationship. The effects of water and fertilizer on the physiological adaptability and nutrient utilization of F. coelestis were verified using structural equation modeling. Based on their different sensitivities to water and nitrogen, the W[sub.H] F[sub.M] treatment was more suitable for F. coelestis establishment. Our results demonstrated that the disproportionate nutrient supply ability and preferential supply aboveground compared to below ground were the main factors influencing F. coelestis seedling establishment under drought conditions. This study provides evidence for a better understanding of herbaceous plants living in high mountain regions and offers important information for reducing the risk of ecological restoration failure in similar alpine regions.
Journal Article
Plant–microbiome interactions: from community assembly to plant health
Healthy plants host diverse but taxonomically structured communities of microorganisms, the plant microbiota, that colonize every accessible plant tissue. Plant-associated microbiomes confer fitness advantages to the plant host, including growth promotion, nutrient uptake, stress tolerance and resistance to pathogens. In this Review, we explore how plant microbiome research has unravelled the complex network of genetic, biochemical, physical and metabolic interactions among the plant, the associated microbial communities and the environment. We also discuss how those interactions shape the assembly of plant-associated microbiomes and modulate their beneficial traits, such as nutrient acquisition and plant health, in addition to highlighting knowledge gaps and future directions.In this Review, Trivedi and colleagues explore the interactions between plants, their associated microbial communities and the environment, and also discuss how those interactions shape the assembly of plant-associated microbiomes and modulate their beneficial traits.
Journal Article