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"HyperText Markup Language"
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Hypertext preprocessor framework in the development of web applications
2020
This writing paper aims to determine the Hypertext Preprocessor (PHP) framework that is widely used and analyze the benefits of the framework in making a web application. A review systematically through a review article about a PHP framework. Article search is accessed from an internet database search. articles are taken from 2014 to 2019. The PHP framework can simplify the process of developing web applications because the concept has already been determined. Whereas if you use regular PHP, a programmer makes coding, folder structure or configuration is made as he wishes. Usually, the PHP framework uses the concept of Model-View-Controller (MVC), its function model is for database queries, its View function is for displaying HTML (Hypertext Markup Language), the controller functions for calculations or logic. The result is that PHP Laravel and CodeIgniter frameworks are the most widely used in building a web application. PHP Framework makes the development of applications web becomes much faster and more stable. The selection of a PHP framework that is appropriate for the project of making the application web also can affect the outcome performance was obtained after the application of the web was completed.
Journal Article
The Essential Guide to HTML5 and CSS3 Web Design
by
Sumner, Victor
,
Synodinos, Dionysios
,
Grannell, Craig
in
Cascading style sheets
,
Computer programming
,
Computer Science
2012
The Essential Guide to HTML5 and CSS3 Web Design has been fully revised from its critically acclaimed first edition, and updated to include all of the new features and best practices of HTML5 and CSS3. This book reveals all you'll need to design great web sites that are standards-compliant, usable, and aesthetically pleasing, but it won't overwhelm you with waffle, theory, or obscure details!You will find The Essential Guide to HTML5 and CSS3 Web Design invaluable at any stage of your career, with its mixture of practical tutorials and reference material. Beginners will quickly pick up the basics, while more experienced web designers and developers will keep returning to the book again and again to read up on techniques they may not have used for a while, or to look up properties, attributes and other details. This book is destined to become a close friend, adopting a permanent place on your desk.The Essential Guide to HTML5 and CSS3 Web Design starts off with a brief introduction to the web and web design, before diving straight in to HTML5 and CSS3 basics, reusing code, and other best practices you can adopt. The book then focuses on the most important areas of a successful web site: typography, images, navigation, tables, layouts, forms and feedback (including ready-made PHP scripts) and browser quirks, hacks and bugs.The Essential Guide to HTML5 and CSS3 Web Design is completely up-to-date, covering support of the newest standards in all the latest browsers, including IE 9 and Firefox 4. The last chapter of the book provides several case studies to dissect and learn from, including all the most popular web site archetypes—a blog, a store front, a corporate home page, and an online gallery. You'll also appreciate several detailed reference appendices covering CSS, HTML, color references, entities, and more—any details you need to look up will be close at hand.
Engineering Rich Internet Application User Interfaces over Legacy Web Models
by
Linaje, Marino
,
Preciado, Juan Carlos
,
Sanchez-Figueroa, Fernando
in
Application software
,
Applied sciences
,
Business
2007
A steadily growing trend in Web applications is the development of user interfaces through rich Internet applications. Among other capabilities, RIAs offer high interactivity and native multimedia support, giving them a major advantage over standard HTML To update existing HTML Web applications, the authors propose the RUX-Model, which facilitates the user interface adaptation of existing Web 1.0 applications to Web 2.0. Their proposal focuses on new RIA capacities that exploit the data and business logic already provided in legacy Web models.
Journal Article
The influence of preprocessing on text classification using a bag-of-words representation
2020
Text classification (TC) is the task of automatically assigning documents to a fixed number of categories. TC is an important component in many text applications. Many of these applications perform preprocessing. There are different types of text preprocessing, e.g., conversion of uppercase letters into lowercase letters, HTML tag removal, stopword removal, punctuation mark removal, lemmatization, correction of common misspelled words, and reduction of replicated characters. We hypothesize that the application of different combinations of preprocessing methods can improve TC results. Therefore, we performed an extensive and systematic set of TC experiments (and this is our main research contribution) to explore the impact of all possible combinations of five/six basic preprocessing methods on four benchmark text corpora (and not samples of them) using three ML methods and training and test sets. The general conclusion (at least for the datasets verified) is that it is always advisable to perform an extensive and systematic variety of preprocessing methods combined with TC experiments because it contributes to improve TC accuracy. For all the tested datasets, there was always at least one combination of basic preprocessing methods that could be recommended to significantly improve the TC using a BOW representation. For three datasets, stopword removal was the only single preprocessing method that enabled a significant improvement compared to the baseline result using a bag of 1,000-word unigrams. For some of the datasets, there was minimal improvement when we removed HTML tags, performed spelling correction or removed punctuation marks, and reduced replicated characters. However, for the fourth dataset, the stopword removal was not beneficial. Instead, the conversion of uppercase letters into lowercase letters was the only single preprocessing method that demonstrated a significant improvement compared to the baseline result. The best result for this dataset was obtained when we performed spelling correction and conversion into lowercase letters. In general, for all the datasets processed, there was always at least one combination of basic preprocessing methods that could be recommended to improve the accuracy results when using a bag-of-words representation.
Journal Article
Development of a nanoparticle-based immunotherapy targeting PD-L1 and PLK1 for lung cancer treatment
2022
Immune checkpoint inhibitors (ICIs) targeting PD-L1 and PD-1 have improved survival in a subset of patients with advanced non-small cell lung cancer (NSCLC). However, only a minority of NSCLC patients respond to ICIs, highlighting the need for superior immunotherapy. Herein, we report on a nanoparticle-based immunotherapy termed ARAC (Antigen Release Agent and Checkpoint Inhibitor) designed to enhance the efficacy of PD-L1 inhibitor. ARAC is a nanoparticle co-delivering PLK1 inhibitor (volasertib) and PD-L1 antibody. PLK1 is a key mitotic kinase that is overexpressed in various cancers including NSCLC and drives cancer growth. Inhibition of PLK1 selectively kills cancer cells and upregulates PD-L1 expression in surviving cancer cells thereby providing opportunity for ARAC targeted delivery in a feedforward manner. ARAC reduces effective doses of volasertib and PD-L1 antibody by 5-fold in a metastatic lung tumor model (LLC-JSP) and the effect is mainly mediated by CD8+ T cells. ARAC also shows efficacy in another lung tumor model (KLN-205), which does not respond to CTLA-4 and PD-1 inhibitor combination. This study highlights a rational combination strategy to augment existing therapies by utilizing our nanoparticle platform that can load multiple cargo types at once.
Only a minority of patients with non-small cell lung cancer (NSCLC) respond to immune checkpoint inhibitors. Here the authors design a nanosystem for the co-delivery of a PLK1 inhibitor and PD-L1 antibody, showing anti-tumor immune responses in preclinical lung cancer models.
Journal Article
HTML5 Foundations
2012,2013
Master innovative and eye-catching website design with the exciting new Treehouse Series of books
Turn plain words and images into stunning websites using HTML5 and this beautiful, full-colour guide. Taking you beyond the constraints of prebuilt themes and simple site building tools, this new Treehouse book combines practicality with inspiration to show you how to create fully customized, modern, and dazzling websites that make viewers want to stop and stay.
The exciting new Treehouse Series of books is authored by Treehouse experts and packed with innovative design ideas and practical skill-building. If you're a web developer, web designer, hobbyist, or career-changer, every book in this practical new series should be on your bookshelf.
* Part of the new Treehouse Series of books, teaching you effective and compelling website development and design, helping you build practical skills
* Provides career-worthy information from Treehouse industry pros and trainers
* Explains HTML5 basics, such as how to format text, add scripts to pages, and use HTML5 for audio and video
* Also covers hypermedia, CSS and JavaScript, embedding video, geolocation, and much more
Leverage pages of dazzling website design ideas and expert instruction with a new Treehouse Series book.
Propagating annotations of molecular networks using in silico fragmentation
by
van der Hooft, Justin J. J.
,
Balunas, Marcy J.
,
Lopes, Norberto Peporine
in
Animals
,
Annotations
,
Ants - microbiology
2018
The annotation of small molecules is one of the most challenging and important steps in untargeted mass spectrometry analysis, as most of our biological interpretations rely on structural annotations. Molecular networking has emerged as a structured way to organize and mine data from untargeted tandem mass spectrometry (MS/MS) experiments and has been widely applied to propagate annotations. However, propagation is done through manual inspection of MS/MS spectra connected in the spectral networks and is only possible when a reference library spectrum is available. One of the alternative approaches used to annotate an unknown fragmentation mass spectrum is through the use of in silico predictions. One of the challenges of in silico annotation is the uncertainty around the correct structure among the predicted candidate lists. Here we show how molecular networking can be used to improve the accuracy of in silico predictions through propagation of structural annotations, even when there is no match to a MS/MS spectrum in spectral libraries. This is accomplished through creating a network consensus of re-ranked structural candidates using the molecular network topology and structural similarity to improve in silico annotations. The Network Annotation Propagation (NAP) tool is accessible through the GNPS web-platform https://gnps.ucsd.edu/ProteoSAFe/static/gnps-theoretical.jsp.
Journal Article
The completeness characterization of \\C(\\mathcal {L})\\ , \\\\mathcal {L}\\ a locale
2019
The result of the title is: an archimedean \\[\\ell \\]-group with weak unit A is (isomorphic to) \\[C(\\mathcal {L})\\] for some (identifiable) locale \\[\\mathcal {L}\\] (or, \\[\\mathbb {R}\\mathcal {L}^{\\mathrm {op}}\\], \\[\\mathcal {L}^{\\mathrm {op}}\\] the opposite frame) iff A is divisible and “\\[*\\]-complete,” (a type of sequential completeness). This is from Ball and Hager (Positivity 10:165–199, 2006), and is revisited here, with streamlined proof.
Journal Article
SurvExpress: An Online Biomarker Validation Tool and Database for Cancer Gene Expression Data Using Survival Analysis
by
Martínez-Torteya, Antonio
,
Chacolla-Huaringa, Rafael
,
Treviño, Victor
in
Anopheles
,
Bioindicators
,
Biomarkers
2013
Validation of multi-gene biomarkers for clinical outcomes is one of the most important issues for cancer prognosis. An important source of information for virtual validation is the high number of available cancer datasets. Nevertheless, assessing the prognostic performance of a gene expression signature along datasets is a difficult task for Biologists and Physicians and also time-consuming for Statisticians and Bioinformaticians. Therefore, to facilitate performance comparisons and validations of survival biomarkers for cancer outcomes, we developed SurvExpress, a cancer-wide gene expression database with clinical outcomes and a web-based tool that provides survival analysis and risk assessment of cancer datasets. The main input of SurvExpress is only the biomarker gene list. We generated a cancer database collecting more than 20,000 samples and 130 datasets with censored clinical information covering tumors over 20 tissues. We implemented a web interface to perform biomarker validation and comparisons in this database, where a multivariate survival analysis can be accomplished in about one minute. We show the utility and simplicity of SurvExpress in two biomarker applications for breast and lung cancer. Compared to other tools, SurvExpress is the largest, most versatile, and quickest free tool available. SurvExpress web can be accessed in http://bioinformatica.mty.itesm.mx/SurvExpress (a tutorial is included). The website was implemented in JSP, JavaScript, MySQL, and R.
Journal Article
Hepatocyte phosphatase DUSP22 mitigates NASH-HCC progression by targeting FAK
2022
Nonalcoholic steatohepatitis (NASH), a common clinical disease, is becoming a leading cause of hepatocellular carcinoma (HCC). Dual specificity phosphatase 22 (DUSP22, also known as JKAP or JSP-1) expressed in numerous tissues plays essential biological functions in immune responses and tumor growth. However, the effects of DUSP22 on NASH still remain unknown. Here, we find a significant decrease of DUSP22 expression in human and murine fatty liver, which is mediated by reactive oxygen species (ROS) generation. Hepatic-specific DUSP22 deletion particularly exacerbates lipid deposition, inflammatory response and fibrosis in liver, facilitating NASH and non-alcoholic fatty liver disease (NAFLD)-associated HCC progression. In contrast, transgenic over-expression, lentivirus or adeno-associated virus (AAV)-mediated DUSP22 gene therapy substantially inhibit NASH-related phenotypes and HCC development in mice. We provide mechanistic evidence that DUSP22 directly interacts with focal adhesion kinase (FAK) and restrains its phosphorylation at Tyr397 (Y397) and Y576 + Y577 residues, subsequently prohibiting downstream activation of extracellular signal-regulated kinase 1/2 (ERK1/2) and nuclear factor-κB (NF-κB) cascades. The binding of DUSP22 to FAK and the dephosphorylation of FAK are indispensable for DUSP22-meliorated NASH progression. Collectively, our findings identify DUSP22 as a key suppressor of NASH-HCC, and underscore the DUSP22-FAK axis as a promising therapeutic target for treatment of the disease.
Mechanisms underlying the pathogenesis of nonalcoholic steatohepatitis are unclear. Here, the authors show that ROS-mediated DUSP22 degradation participates in the progression of fatty liver, contributing to the development of NASH and associated HCC via regulating FAK and its downstream ERK1/2 and NF-κB signaling cascade.
Journal Article