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2,685
result(s) for
"Identification keys (Taxonomy)"
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Baetidae
by
El Moutaouakil, Majida El Alami
,
Samraoui, Boudjéma
,
Benhadji, Nadhira
in
Analysis
,
Identification and classification
,
Identification keys (Taxonomy)
2023
Among mayflies, Baetidae are often considered as easy to recognise at the family level, but difficult to identify at lower level. In several faunistic or ecological studies, the identification remains at the family level; Baetidae are generally considered as widespread and ubiquitous, therefore as poorly informative for ecological studies or bioassessments. Here, a straightforward identification key is offered to larvae of the ten genera of Baetidae reported from Maghreb based on easily observable and understandable characters. The diversity, ecology, and distribution of each taxonomic unit (genera or subgenera) are discussed and the main difficulties for deeper identification are pointed out. Future challenges and remaining taxonomic riddles for Maghrebian Baetidae are detailed.
Journal Article
Baetidae (Baetidae, Ephemeroptera) in the Maghreb: state of the art, key, and perspectives
by
El Moutaouakil, Majida El Alami
,
Samraoui, Boudjéma
,
Benhadji, Nadhira
in
Analysis
,
Baetidae
,
Biodiversity
2023
Among mayflies, Baetidae are often considered as easy to recognise at the family level, but difficult to identify at lower level. In several faunistic or ecological studies, the identification remains at the family level; Baetidae are generally considered as widespread and ubiquitous, therefore as poorly informative for ecological studies or bioassessments. Here, a straightforward identification key is offered to larvae of the ten genera of Baetidae reported from Maghreb based on easily observable and understandable characters. The diversity, ecology, and distribution of each taxonomic unit (genera or subgenera) are discussed and the main difficulties for deeper identification are pointed out. Future challenges and remaining taxonomic riddles for Maghrebian Baetidae are detailed.
Journal Article
Clavis: An open and versatile identification key format
2022
The skills and knowledge needed to recognize and classify taxa are becoming increasingly scarce in the scientific community. At the same time, it is clear that these skills are strongly needed in biodiversity monitoring for management and conservation, especially when carried out by citizen scientists. Formalizing the required knowledge in the form of digital identification keys is one way of making such knowledge more available for professional and amateur observers of biodiversity. In this paper we describe Clavis, an open and versatile data format for capturing the knowledge required for taxon identification through digital keys, allowing for a level of detail beyond that of any current key format. We present the format independently from any particular implementation, as our aim is for Clavis to serve as a basis for interoperable tools and interfaces serving different needs and actors.
Journal Article
Evaluation of a method to identify midwives in national provider identifier data
2023
Objectives
Comparison of national midwife workforce data from the National Provider Identifier file determined it undercounted midwives compared to national data available from the American Midwifery Certification Board. This undercount may be due to the existence of three taxonomy categories for midwives when registering for the National Provider Identifier. The objective of this study was to obtain an accurate count of advanced practice midwives using the National Provider Identifier Data.
Methods
A recode strategy was created using the NPPES Data Dissemination File for November 7, 2021. The strategy identified advanced practice midwives using education and certification information provided in the “credentials” field. The strategy was validated using the NPPES Data Dissemination File for August 7, 2022 and the gold standard was the American Midwifery Certification Board count of midwives by state for August, 2022. Validation compared the accuracy and precision of the recode to the accuracy and precision of using the advanced practice midwife taxonomy category.
Results
The recode strategy improved the accuracy and precision of the count of advanced practice midwives compared to the identification of advanced practice midwives using the advanced practice midwife taxonomy category.
Conclusions for practice
Recoding the NPPES Data Dissemination File provides a more accurate and precise count of advanced practice midwives than relying on the existing advanced practice midwife taxonomy classification. Researchers can use the NPPES Data Dissemination File when studying the midwifery workforce.
Significance
What is already known on this subject?
The National Provider Identifier file is a national list of healthcare providers with practice location. The National Provider Identifier file contains only 60% of the advanced practice midwives (certified nurse-midwives and certified midwives) certified with the American Midwifery Certification Board, reducing its usefulness for research and planning.
What this study adds?
Additional advanced practice midwives were identified in the National Provider Identifier File under a different midwife taxonomy code. Recoding midwives using both the taxonomy codes and the credential text improves accuracy of the NPI data for research and planning.
Journal Article
DKey software for editing and browsing dichotomous keys
2018
Despite advances in computer technology and the increasing availability of multiple-access taxonomic keys, traditional dichotomous keys remain the most often used taxonomic identification tools. On the other hand, there seems to be a lack of an editor of dichotomous keys, which is both freely available and easy to use. The DKey software was developed in order to alleviate this problem. A taxonomic key in text format can be imported to the software in order to edit it. Various editing options are possible, including: moving couplets, removing couplets, combining keys and renumbering keys. The software can output the key either in the traditional text format, ready for publication in a scientific journal, or in hypertext linked format, which makes identification faster and easier, due to the fact that pointers can be clicked in order to move to the next couplet. The DKey software should be useful for both taxonomic experts creating keys and those who use them for identification. The DKey software is freely available and open source.
Journal Article
A multi-access identification key based on colour patterns in ladybirds (Coleoptera, Coccinellidae)
by
Vignes-Lebbe, Régine
,
Jouveau, Séverin
,
Delaunay, Mathilde
in
Analysis
,
Animal biology
,
Biodiversity
2018
An identification key based on French ladybird colouration is proposed for the tribes Chilocorini, Coccinellini, and Epilachnini. These tribes were chosen based on their relatively limited species diversity, as well as their large size and high colour diversity, making them easy to observe and collect. The identification key runs on Xper 3 software, which allows the building of structured knowledge bases and online free-access keys. The online interactive Xper key is available at http://french-ladybird.identificationkey.fr.
Journal Article
Knowledge Organization in the Wild
Three popular knowledge organization systems (KOSs)—the Encyclopædia Britannica’s “Outline of Knowledge,” Roget’s International Thesaurus’s “Synopsis of Categories,” and the Dewey Decimal Classification—are compared in the context of a taxonomy of evaluation methods for KOSs that takes into account similarities and differences in formats and purposes. The goals are to argue for the wider adoption of a framework for KOS evaluation of the kind presented here; to promote the treatment of encyclopedia outlines and thesaurus synopses as well as library classification schemes as KOSs assessable via such a framework; and to improve our understanding of KOSs in general.
Journal Article
Proposal for an index to evaluate dichotomous keys
by
Wiemers, Martin
,
Settele, Josef
,
Sinh, Nguyen Van
in
Biological research
,
Identification keys
,
Identification keys (Taxonomy)
2017
Dichotomous keys are the most popular type of identification keys. Studies have been conducted to evaluate dichotomous keys in many aspects. In this paper we propose an index for quantitative evaluation of dichotomous keys (E dicho ). The index is based on the evenness and allows comparing identification keys of different sizes.
Journal Article
Semantic tagging of and semantic enhancements to systematics papers: ZooKeys working examples
2010
The concept of semantic tagging and its potential for semantic enhancements to taxonomic papers is outlined and illustrated by four exemplar papers published in the present issue of ZooKeys. The four papers were created in different ways: (i) written in Microsoft Word and submitted as non-tagged manuscript (doi: 10.3897/zookeys.50.504); (ii) generated from Scratchpads and submitted as XML-tagged manuscripts (doi: 10.3897/zookeys.50.505 and doi: 10.3897/zookeys.50.506); (iii) generated from an author's database (doi: 10.3897/zookeys.50.485) and submitted as XML-tagged manuscript. XML tagging and semantic enhancements were implemented during the editorial process of ZooKeys using the Pensoft Mark Up Tool (PMT), specially designed for this purpose. The XML schema used was TaxPub, an extension to the Document Type Definitions (DTD) of the US National Library of Medicine Journal Archiving and Interchange Tag Suite (NLM). The following innovative methods of tagging, layout, publishing and disseminating the content were tested and implemented within the ZooKeys editorial workflow: (1) highly automated, fine-grained XML tagging based on TaxPub; (2) final XML output of the paper validated against the NLM DTD for archiving in PubMedCentral; (3) bibliographic metadata embedded in the PDF through XMP (Extensible Metadata Platform); (4) PDF uploaded after publication to the Biodiversity Heritage Library (BHL); (5) taxon treatments supplied through XML to Plazi; (6) semantically enhanced HTML version of the paper encompassing numerous internal and external links and linkouts, such as: (i) vizualisation of main tag elements within the text (e.g., taxon names, taxon treatments, localities, etc.); (ii) internal cross-linking between paper sections, citations, references, tables, and figures; (iii) mapping of localities listed in the whole paper or within separate taxon treatments; (v) taxon names autotagged, dynamically mapped and linked through the Pensoft Taxon Profile (PTP) to large international database services and indexers such as Global Biodiversity Information Facility (GBIF), National Center for Biotechnology Information (NCBI), Barcode of Life (BOLD), Encyclopedia of Life (EOL), ZooBank, Wikipedia, Wikispecies, Wikimedia, and others; (vi) GenBank accession numbers autotagged and linked to NCBI; (vii) external links of taxon names to references in PubMed, Google Scholar, Biodiversity Heritage Library and other sources. With the launching of the working example, ZooKeys becomes the first taxonomic journal to provide a complete XML-based editorial, publication and dissemination workflow implemented as a routine and cost-efficient practice. It is anticipated that XML-based workflow will also soon be implemented in botany through PhytoKeys, a forthcoming partner journal of ZooKeys. The semantic markup and enhancements are expected to greatly extend and accelerate the way taxonomic information is published, disseminated and used.
Journal Article
Ammi visnaga , a new taxon in Croatian flora
2011
During floristic research into the island of Brac (Dalmatia, Croatia) in 2010, Ammi visnaga (L.) Lam. (Apiaceae), a new neophyte for Croatia was found in several localities and natural habitats. At the altitude of 380-160 m above sea level, mostly in habitats disturbed by humans, the located populations were composed of numerous and vital specimens in blooms and with fruits. The gradual and successful integration of this species into the natural vegetation was noticed, particularly in grasslands of the association Brachypodio retuso-Trifolietum stellati Horvatic 1958 and macchia of the association Fraxino orno-Quercetum ilicis Horvatic (1956) 1958. Key words: Ammi visnaga, flora, neophyte, island Brac, Croatia
Journal Article