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Plant breeders are increasing yields and improving agronomic traits in several perennial grain crops, the first of which is now being incorporated into commercial food products. Integration strategies and management guidelines are needed to optimize production of these new crops, which differ substantially from both annual grain crops and perennial forages. To offset relatively low grain yields, perennial grain cropping systems should be multifunctional. Growing perennial grains for several years to regenerate soil health before rotating to annual crops and growing perennial grains on sloped land and ecologically sensitive areas to reduce soil erosion and nutrient losses are two strategies that can provide ecosystem services and support multifunctionality. Several perennial cereals can be used to produce both grain and forage, and these dual-purpose crops can be intercropped with legumes for additional benefits. Highly diverse perennial grain polycultures can further enhance ecosystem services, but increased management complexity might limit their adoption.

Aims Perennial crops with more extensive and deep root systems could access deep stored water and build resilience to water shortage. In the context of human nutrition, perennial grain crops are very interesting. However, it is still questionable whether they are effective in using subsoil water. We compared intermediate wheatgrass (Kernza®) Thinopyrum intermedium , a perennial grain crop, to alfalfa Medicago sativa , a forage crop, for subsoil root growth and water uptake. Alfalfa was chosen because of its deep root system and agronomical interest as a companion crop. Methods Using TDR sensors, deuterium tracer labelling, minirhizotrons and the Hydrus-1D model we characterised the root distribution and water uptake patterns of these two perennial crops during two cropping seasons under field conditions down to 2.5 m soil depth. Results Both crops grew roots down to 2.0 m depth that were active in water uptake but alfalfa was deeper rooted than intermediate wheatgrass. All experimental methods concluded that alfalfa used more water from below 1.0 m depth than intermediate wheatgrass. However, simulations predicted that intermediate wheatgrass used more than 20 mm of water after anthesis from below 1 m soil depth. Simulations confirmed the advantage of deep roots in accessing deep soil water under drought. Conclusions In regions with high groundwater recharge, growing deep-rooted perennial crops have great potential to exploit deep soil water that is often left unused. However, the road to a profitable perennial grain crop is still long and breeding intermediate wheatgrass (Kernza®) cultivars for increased root growth at depth seems to be a worthy investment for the development of more drought tolerant cultivars.

Ecological intensification of agriculture is a proposed strategy to enhance the production of food while expanding ecosystem services and reducing inputs. Perennial plants that are directly harvested for human food are a novel means of ecological intensification, by potentially providing unprecedented levels of ecological services, such as increased soil carbon and reduced nutrient leaching. However, existing herbaceous perennial plants produce low yields of harvestable seed. Therefore, we initiated a domestication program to improve the grain yield of the perennial intermediate wheatgrass (Thinopyrum intermedium [Host] Barkworth & D.R. Dewey). The breeding program has adapted to changing resources and to results from previous generations, with methods becoming more elaborate as the program has matured over six breeding cycles. Average predicted gains from selection accumulated over five cycles were 143, 181 and 60% respectively, for seed yield per head, percent naked seed and mass per seed. We did not detect negative correlations that would indicate simultaneously achieving increased grain yield and sustained perenniality would be particularly difficult. Heritability estimates based on genetic markers were the same or higher than those calculated from a pedigree, indicating that markers have potential to expedite breeding efforts.

Purpose Perennial crops have been suggested as a more sustainable alternative to the currently most common cropping systems. Compared with annual plants, perennial plants produce more biomass and have deeper roots, and are expected to lead to higher soil organic carbon (SOC). This hypothesis, however, has not been well tested for grain crops. Methods Using perennial intermediate wheatgrass (IWG, Thinopyrum intermedium ) and annual winter wheat ( Triticum aestivum ) as focal species, and native grassland as reference, we quantified the SOC accumulation via a process-based model, describing water and heat exchanges and carbon-nitrogen cycling in the canopy and soil to a depth of 2 m. The model includes C fixation via photosynthesis, plant biomass growth and litter production, physical protection of SOC, depolymerisation, C mineralisation, nitrification, denitrification, microbial growth, and necromass turnover in the soil. While of general applicability, we considered a sandy loam under warm-summer humid continental climate. Results Following a conversion from native grassland, IWG reduced SOC losses by at least 38%, especially in the particulate organic carbon (POC) pool, within the top 2 m of soil, compared with annual wheat. Soil microbial biomass and soil respiration were higher in IWG than annual wheat. Shifting from annual wheat to high photosynthetic capacity IWG increased SOC by about 33 g C m −2 y −1 (averaged over a 4-year continuous IWG cropping), with a large fraction of SOC gain stemming from restoring POC. Conclusion Compared with annual grains, perennial grains can increase soil carbon sequestration and maintain SOC at levels nearer to that of native grasslands.

Kernza® intermediate wheatgrass [IWG; Thinopyrum intermedium (Host) Barkworth & Dewey] is a novel perennial cool-season grass that is being bred for use as a dual-purpose grain and forage crop. The environmental benefits of perennial agriculture have motivated the development of IWG cropping systems and markets for perennial grain food products made with Kernza, but the economic viability and environmental impact of IWG remain uncertain. In this study, we compared three-year cycles of five organic grain production systems: an IWG monoculture, IWG intercropped with medium red clover, a continuous winter wheat monoculture, a wheat–red clover intercrop, and a corn–soybean–spelt rotation. Economic and environmental impacts of each cropping system were assessed using enterprise budgets, energy use, greenhouse gas (GHG) emissions, and emergy indices as indicators. Grain and biomass yields and values for production inputs used in these analyses were obtained from experimental data and management records from two separate field experiments conducted in New York State, USA. Grain yield of IWG averaged 478 kg ha−1 yr−1 over three years, equaling approximately 17% of winter wheat grain yield (2807 kg ha−1 yr−1) over the same period. In contrast, total forage harvested averaged 6438 kg ha−1 yr−1 from the IWG systems, approximately 160% that of the wheat systems (4024 kg ha−1 yr−1). Low grain yield of IWG greatly impacted economic indicators, with break-even farm gate prices for Kernza grain calculated to be 23% greater than the current price of organic winter wheat in New York. Energy use and GHG emissions from the IWG systems were similar to the annual systems when allocated per hectare of production area but were much greater when allocated per kg of grain produced and much lower when allocated per kg of biomass harvested inclusive of hay and straw. Emergy sustainability indices were favorable for the IWG systems due to lower estimated soil erosion and fewer external inputs over the three-year crop cycle. The results show that the sustainability of IWG production is highly dependent on how the hay or straw co-product is used and the extent to which external inputs can be substituted with locally available renewable resources. Integrated crop–livestock systems appear to be a viable scenario for the adoption of IWG as a dual-use perennial grain and forage crop.

Introduction Perennial intermediate wheatgrass (IWG, Kernza®) establishes an extensive root system which positively impacts nutrient retention and biodiversity and therefore offers a regenerative alternative to current annual wheat production. However, the effect of its components on the soil ecosystem, for example, on the macrofauna and microbiota, is not yet understood. Materials and Methods Litter and root samples of IWG and annual wheat were sampled and used in an experimental design consisting of two pot experiments under controlled conditions to investigate the effect of earthworms and microorganisms on litter and root decomposition differing in starch and element composition. From the experiment, two lifeforms of earthworms (anecic, endogeic) and the soil microbiome were analysed. Results Both litter and root samples had higher lignin and starch content for IWG as compared to annual wheat. A possible greater nutrient retention for IWG was also indicated by higher nitrogen and carbon contents in both the litter and the root samples. Accordingly, the C/N ratio was lower than for annual wheat, which resulted in a faster decomposition rate and a significantly lower ratio of fungi to bacteria. Both cropping systems showed significant differences in the underlying soil bacterial community composition. Most notably, the IWG root substrate led to a higher diversity in the underlying soil in comparison to the annual wheat substrate. Conclusion The beneficial substrate composition of IWG supports macrofauna and microbial uptake and decomposition. The rhizosphere harbours a higher microbial diversity and an increased nutrient retention in comparison to annual wheat, recommending IWG for a sustainable and regenerative agriculture.

Intermediate wheatgrass (IWG, Thinopyrum intermedium [Host] Barkworth & D. R. Dewey) has been developed as a perennial grain crop for human consumption along with providing environmental benefits and ecosystem services. Grain and products derived from IWG cultivars improved for food production have been marketed under the registered trademark, Kernza. Development of IWG as a perennial grain crop began in 1980s with a phenotypic recurrent selection program as the Rodale Institute (RI) and the Big Flats Plant Material Center (BFPMC) used IWG plant introductions (PI) from the National Plant Germplasm System (NPGS) to improve populations of IWG. Initial selections were provided to The Land Institute (TLI) where they were subsequently improved for grain production, yet the identity of the founder material of improved, food-grade IWG has not been publicly documented. Recently recovered original documents have been used to reconstruct the early breeding program to identify the most likely 20 PIs that form the founders of modern food-grade IWG. Molecular data using genotyping-by-sequencing in current elite breeding material, and remnant seed and plant material from the initial RI selections have provided supporting evidence for the historical records. The genetic origin for food-grade IWG is focused between the Black Sea and Caspian Sea in the Stavropol region of Russia, with smaller contributions likely from collections as distant as Kazakhstan in the east to Turkey in the west. This work connects the flow of germplasm and utility of NPGS PIs to present day IWG grain cultivars being developed in multiple breeding programs around the world.

Perennial grain crops are emerging as a promising addition to sustainable agricultural systems because of their low-input requirements and delivery of ecosystem services. However, adoption of these crops is expected to bring novel management challenges, including those related to plant diseases. In New York, fungal pathogens of annual grains have a significant impact on crop yield and value and are generally controlled through a combination of host resistances, cultural practices and chemical fungicides. Without the availability of crop rotation and soil tillage practices, disease control in perennial grain systems may be problematic, and little is known about perennial grain crop susceptibility to local plant pathogen populations. During 2017 and 2018, ongoing field trials of two perennial grain crops recently introduced in New York, intermediate wheatgrass (IWG; Thinopyrum intermedium ) and perennial cereal rye (PCR; Secale cereale ), were assessed for the presence of putative fungal pathogens on actively growing plants, overwintered crop residue and harvested grain. A total of nine potential host–pathogen combinations were recorded based on symptomology, pathogen morphology and DNA sequences. Common annual crop pathogens were recovered most frequently, but, at one site, Phyllachora graminis , causal fungus of tar spot and a pathogen not previously reported on crops in New York, was found on IWG. Residue colonization by an important toxigenic pathogen ( Fusarium graminearum ) was high in both crops, though mycotoxin levels in associated grain were low, indicating either the hosts or environment were unsuitable for disease development. Seed-borne fungal communities differed across crops and locations, and black point, a condition caused by Alternaria and Bipolaris fungi and indicative of compromised grain quality, was prevalent in PCR under some conditions. Growing PCR with intercropped red clover ( Trifolium pratense L.) resulted in less Stagonospora colonization of stem residue, and PCR grown with an oat ( Avena sativa L.) nurse crop had a reduced incidence of black point. These alternative cultural practices may prove useful for managing disease in perennial grains. Our results suggest that the incorporation of perennial crops into the agricultural landscape will lead to familiar plant disease problems requiring new solutions as well as new problems that may require significant research investments.

Kernza ® intermediate wheatgrass [ Thinopyrum intermedium (Host) Barkworth & Dewey], the first perennial grain crop to come to market in North America, can provide a number of ecosystem services when integrated into cropping systems that are dominated by annual grain crops. However, grain yield from Kernza is lower than comparable annual cereal crops such as wheat and oats. Also, although Kernza is a long-lived perennial that can persist for decades, grain yield tends to decline over time as Kernza stands age leading most farmers to replant or rotate to a different crop after 3–5 yrs. Increased intraspecific competition as stand density increases with age has been reported to cause grain yield declines. We investigated the effect of strip-tillage applied at two different timings, between the third and fourth grain harvests, from a Kernza stand in upstate New York. Strip-tillage applied in late fall as plants were entering dormancy increased grain yield by 61% when compared to the control treatment without strip-tillage. However, total crop biomass was not reduced resulting in a greater harvest index for the fall strip-tillage treatment. Strip-tillage applied before stem elongation the following spring reduced overall tiller density and total crop biomass but did not impact tiller fertility or grain yield compared to the control treatment without strip-tillage. Increased grain yield in the fall strip-tillage treatment was due to an increase in the percentage of tillers that produced mature seedheads. This suggests that grain yield decline over time is at least partially caused by competition between tillers in dense stands. Results support further research and development of strip-tillage and other forms of managed disturbance as tools for maintaining Kernza grain yield over time.